Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,665,195:1 |
(T)7→8 |
100% |
intergenic (+75/‑120) |
dmsD → / → clcB |
twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,665,188 | 1 | . | T | 95.4%
| 275.1
/ 6.5
| 86 | intergenic (+68/‑127) | dmsD/clcB | twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
| Reads supporting (aligned to +/- strand): ref base . (1/3); new base T (48/34); total (49/37) |
| Fisher's exact test for biased strand distribution p-value = 3.10e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 103 total aligned reads displayed.
CCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGC > NC_000913/1665091‑1665282
|
ccTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑t > 2:2982656/1‑100 (MQ=255)
cTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt > 1:1508503/1‑100 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttt < 2:1616080/100‑1 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttt > 1:3483654/1‑100 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttt > 1:3540439/1‑100 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttt < 1:832596/100‑1 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttt < 2:4104808/100‑1 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑ttttt < 1:3344864/99‑1 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑ttttttt > 2:3220723/1‑99 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑ttttttt > 1:182699/1‑99 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑ttttt < 2:3942264/98‑1 (MQ=255)
ggTTAAACCGCTGTTTCGATAGGATCGCCGTTATTTTGCCGGATGGTGACGATTACGTGCAATGCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttttat < 2:589624/100‑4 (MQ=255)
ggTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttttat > 2:636096/1‑97 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttttatc < 1:1825523/100‑5 (MQ=255)
ttAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttttatc < 1:471948/99‑5 (MQ=255)
tAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTAtctc < 1:561775/100‑1 (MQ=255)
aaaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATctct < 1:3939234/100‑1 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCtt > 1:2398669/1‑100 (MQ=255)
aCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTa > 1:3658879/1‑100 (MQ=255)
aCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTa > 1:1824683/1‑100 (MQ=255)
aCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tttttttatctttt > 2:2429411/1‑91 (MQ=255)
ccGCTGTTTCGATAGGATCAACGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑T‑TTTTTTATCTCTTaa < 1:3875931/99‑1 (MQ=255)
cGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTaaa < 1:112126/100‑1 (MQ=255)
cGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑T‑TTTTTTATCTCTTAAAg < 2:2995965/100‑1 (MQ=255)
tGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAgca > 1:414690/1‑100 (MQ=255)
tGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑T‑TTTTTTATCTCTTAAAgcac > 1:2750411/1‑100 (MQ=255)
ntttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAgcac > 1:1110091/2‑100 (MQ=255)
gTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAgcac > 2:2430635/1‑100 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACTATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAgcacgc < 1:2897409/100‑1 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAgcacgc > 1:2628973/1‑100 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAgcacgc < 1:1673668/100‑1 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAgcacgcac < 1:835987/100‑1 (MQ=255)
gATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACt > 1:2430154/1‑100 (MQ=255)
gATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACt > 2:2478665/1‑100 (MQ=255)
gATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACt > 2:67943/1‑100 (MQ=255)
gATAGGATCACCGTAATATTGCCGGATGGTGACGATGACGCGCAATCCGGCAATACTAGGTTACAGTGTGACGTT‑TTTTTTATATCTTAAAGAACGCACt > 2:890486/1‑100 (MQ=255)
aGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGc < 1:642308/99‑1 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCtt > 1:3295231/1‑100 (MQ=255)
ggATCACAGTACTATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTGACGTT‑TTTTTTATCTCTTAAATCACGCACt > 2:2170601/1‑96 (MQ=255)
gATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCttt > 1:902280/1‑100 (MQ=255)
gATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCttt < 1:884812/100‑1 (MQ=255)
gATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCttt > 1:2542550/1‑100 (MQ=255)
gATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCttt > 1:1779341/1‑100 (MQ=255)
aTCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCtttt > 2:1531749/1‑100 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGTGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCg > 1:312427/1‑100 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCg < 1:1614245/100‑1 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCg < 2:209929/100‑1 (MQ=255)
ncGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTCCTTTTGCgg > 2:1482014/2‑100 (MQ=255)
ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCgg > 2:4050219/1‑100 (MQ=255)
ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCgg < 1:1564805/100‑1 (MQ=255)
cGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGc > 2:2655127/1‑100 (MQ=255)
gTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCt > 2:1956454/1‑100 (MQ=255)
aaTATTGCCGGATGGTGACGATTACTCGCACTCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTgg < 2:3325601/100‑1 (MQ=255)
aaTATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTgg < 2:1971611/100‑1 (MQ=255)
aaTATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTgg < 2:2310500/100‑1 (MQ=255)
atatTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGc < 2:182698/100‑1 (MQ=255)
tatTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGcc < 1:764381/100‑1 (MQ=255)
tGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCTCGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCctct < 2:1106729/100‑1 (MQ=255)
tGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCctct < 1:2478679/100‑1 (MQ=255)
gCCGGATGGTGACGATTACGCGCAATCCGGCAATCATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAACGCCAGAACTGCTTTTGCGGCTGGcgtatt > 1:2828364/1‑95 (MQ=255)
gCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCTGCTGGc > 2:1117949/1‑95 (MQ=255)
aTGGTGACGATTACGCGCAATCCGGCAATAATAGGTGACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCGTTTGCGGCTGGCCTCTGTGGcc < 2:1957241/100‑1 (MQ=255)
tGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCg < 1:3219890/100‑1 (MQ=255)
tGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCg < 1:3111001/100‑1 (MQ=255)
ggTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGc > 1:759047/1‑100 (MQ=255)
ggTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGc < 2:420122/100‑1 (MQ=255)
gTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCa > 2:118970/1‑100 (MQ=255)
tGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaa > 1:994784/1‑100 (MQ=255)
tGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaa > 1:1463589/1‑100 (MQ=255)
tGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCa < 1:2648160/99‑1 (MQ=255)
gACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaa > 1:1866416/1‑100 (MQ=255)
aTTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAg > 1:1560149/1‑100 (MQ=255)
cgcgCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGc > 1:1266859/1‑100 (MQ=255)
cgcgCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGc > 1:369295/1‑100 (MQ=255)
cgcgCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGc > 1:1439437/1‑100 (MQ=255)
gcgcACTCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAACGCACGCACTGCTTTCGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGcc < 2:2731761/100‑1 (MQ=255)
gcgcAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTTCCGCAAAATaat > 2:1437017/1‑94 (MQ=255)
gcgcAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGcc < 1:422746/100‑1 (MQ=255)
cgcAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGccc > 2:3464750/1‑100 (MQ=255)
cgcAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGccc > 1:491814/1‑100 (MQ=255)
cAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgt < 1:987716/100‑1 (MQ=255)
cAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCg > 1:3266484/1‑99 (MQ=255)
ccGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGttt < 1:2291916/100‑1 (MQ=255)
cGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTc > 2:1800880/1‑100 (MQ=255)
cGGCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTc > 1:3726918/1‑100 (MQ=255)
ggCAATAATAGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCa < 1:2692132/100‑1 (MQ=255)
taataGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGcc < 1:1979691/100‑1 (MQ=255)
aataGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGccc > 1:2837518/1‑100 (MQ=255)
aataGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGccc > 1:2583964/1‑100 (MQ=255)
aataGGTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACGGCTTTTGCGGCTGGCCTCTTGTGCCGCAAAATAGTCGCCCGTGTTTCATTGcc < 1:132955/99‑1 (MQ=255)
ggTTACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCCAAATAGTCGCCCGTGTTTCATTGCCCAttt > 1:12434/1‑100 (MQ=255)
tACAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg < 2:3981785/100‑1 (MQ=255)
tACACTGTCTCG‑TGTTGTTTATCTCTTCAAGGACGCTCTGCTTTTGCGGCTCGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCAtt < 2:1071793/96‑1 (MQ=255)
cAGTGTCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCt > 1:2704290/1‑100 (MQ=255)
cAGTGCCACGTT‑TTTTTTATCTCTTAATGCACGCATTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg < 2:1655156/98‑1 (MQ=255)
gtgtCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCa > 1:3897660/1‑100 (MQ=255)
gtCACGTT‑TTTTTTATTTTTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCTCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCAt > 2:2412487/1‑99 (MQ=255)
gtCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg > 1:2483441/1‑100 (MQ=255)
gtCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg > 1:2482881/1‑100 (MQ=255)
tCACGTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGc < 1:4050246/100‑1 (MQ=255)
|
CCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGC > NC_000913/1665091‑1665282
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
