Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,665,195:1 |
(T)7→8 |
100% |
intergenic (+75/‑120) |
dmsD → / → clcB |
twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,665,188 | 1 | . | T | 94.6%
| 229.5
/ 6.3
| 74 | intergenic (+68/‑127) | dmsD/clcB | twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
| Reads supporting (aligned to +/- strand): ref base . (3/1); new base T (35/34); total (39/35) |
| Fisher's exact test for biased strand distribution p-value = 6.16e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑TTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATG > NC_000913/1665090‑1665281
|
tCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t > 2:1632982/1‑100 (MQ=255)
cTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt < 2:1441941/100‑1 (MQ=255)
cTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt > 1:2469860/1‑100 (MQ=255)
cTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt > 1:1363862/1‑100 (MQ=255)
tCGCGGTTAAACCGCTGTTTCGATAGTATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑t < 2:652803/100‑1 (MQ=255)
cgcgGTTAAACCGTTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAAGCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑tt < 1:1328510/100‑1 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑tt < 2:97896/100‑1 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGAGCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑ttt < 2:2159509/100‑2 (MQ=255)
cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑ttta < 1:709616/100‑3 (MQ=255)
cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑ttta < 2:2552992/100‑3 (MQ=255)
ggTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑tttat < 1:2126284/100‑4 (MQ=255)
gTTAAACCGCTGTTTCGATAGTATCACTGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑ttt < 1:1453526/97‑2 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑tttatc < 2:2604592/100‑5 (MQ=255)
ttAAACCGCTTTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑tttatct < 2:883856/100‑6 (MQ=255)
ttAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑ttt‑tt‑tttatc < 2:844637/99‑5 (MQ=255)
tAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAATGTAACG‑TTT‑TTCTTAtctc > 2:2433236/1‑100 (MQ=255)
aCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTa < 2:1279586/100‑1 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTaa > 1:2534434/1‑100 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTaa > 1:2090744/1‑100 (MQ=255)
gCTGTTTCTATAGGATCACCGTAATATTGTCGGATGGTGACGATTACTCGCAATCGGGCAATAATAGGTTACAGGGGCACGTTTT‑TT‑TTATCTCTTaa < 2:127021/98‑1 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTaagg > 1:1630527/1‑98 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCAGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAg > 1:1989984/1‑100 (MQ=255)
tttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAgcacg < 2:934119/100‑1 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACATTGTCACGTTTT‑TT‑TTATCTCTTAAAgcactc > 1:1424289/1‑98 (MQ=255)
tCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAgcacgca < 2:2817761/100‑1 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAgcacgcac > 1:2098577/1‑100 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAgcacgcac < 2:2315953/100‑1 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAgcacgcac < 2:1713246/100‑1 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGTCGATTAGGCGCAATTCGGCAATAATAGGTTACAGTGTCACG‑‑TA‑TT‑TTATCTCTTAAAGCACGCACTGCtttt > 1:225240/1‑100 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCtt > 1:18685/1‑100 (MQ=255)
gATCACCGTAATCTTGCCGGATGGTGACGATTACGCGCAATCCGACAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCttt > 1:2479373/1‑100 (MQ=255)
aTCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCttt < 2:2010527/99‑1 (MQ=255)
cACCGTAATATTGCCGGATTGTGACGATTACGCTCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGc < 1:2796696/100‑1 (MQ=255)
actgTAATATTGCCGGATGGTGATGATTACGCGCTTTCCGGCAATAATAGGTTACAGTGTCGCGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCg < 1:1195780/97‑1 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTAAAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGc > 2:252704/1‑99 (MQ=255)
ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCgg > 1:860148/1‑100 (MQ=255)
ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCg > 2:1630098/1‑99 (MQ=255)
ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCg > 1:2030465/1‑99 (MQ=255)
ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTATCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCg > 1:438587/1‑99 (MQ=255)
atAATATTGCCGGATGGTGAAAAATACGAGAAATAAGGCAAAAATAGGTTAAAGTGTAACG‑TTTCTT‑TTATATATTAAAGAACGCACTGCTTTTGCggtt > 2:1166335/2‑98 (MQ=255)
tAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTg > 2:1236397/1‑100 (MQ=255)
ttccgatctggATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTgg < 1:52601/91‑1 (MQ=255)
aaTATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTgg < 1:1185614/100‑1 (MQ=255)
tatTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGcc < 1:2094089/100‑1 (MQ=255)
tatTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGcc < 1:2031616/100‑1 (MQ=255)
atTGCCGGATGGTGAGGATTATGCTCAATCCGGCAATAATAGGTTACAATGTCACG‑TTTGTT‑TTATCTCTTCAAGCACGCACTGCTTTTGCg < 2:903553/92‑1 (MQ=255)
atTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCct < 2:523816/100‑1 (MQ=255)
gCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtt < 2:1107726/100‑1 (MQ=255)
ccGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCttt < 2:2461391/100‑1 (MQ=255)
ggATGGTGACGATTACGCGCGATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTg < 2:463475/100‑1 (MQ=255)
ggATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTggagatcggaa > 2:52601/1‑91 (MQ=255)
gATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGc < 2:1420859/100‑1 (MQ=255)
gATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGc < 1:1415616/100‑1 (MQ=255)
gATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGc < 1:1236409/100‑1 (MQ=255)
tGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCTCGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCg < 1:2557023/100‑1 (MQ=255)
tGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCATGCACTGCTTTTGCGGCTTGCCTCTTTTGcag < 1:2043599/100‑3 (MQ=255)
ggTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGc > 2:869964/1‑100 (MQ=255)
gTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCa > 1:2716531/1‑100 (MQ=255)
tGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaa > 1:437049/1‑100 (MQ=255)
cGATTACGCGCAATCCGGCAATACTAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAACACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt > 1:842407/1‑100 (MQ=255)
cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTTCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt > 2:845904/1‑100 (MQ=255)
cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt < 2:2548716/100‑1 (MQ=255)
cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt < 1:1051697/100‑1 (MQ=255)
gATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATa > 1:2335215/1‑100 (MQ=255)
aCGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTc > 1:1874308/1‑99 (MQ=255)
aCGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATATCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCTCAAACTTGTc > 2:852388/1‑99 (MQ=255)
cgcgcgCTCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGc < 1:1195947/100‑1 (MQ=255)
cgcgCAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGc > 1:1341497/1‑100 (MQ=255)
cgcAATCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGccc > 1:2267414/1‑100 (MQ=255)
aaTCCGGCAATAATAGGTAACAGAGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCAGCTGCACTCATTTGACGCAAAACAGTCcccc > 2:2551510/1‑97 (MQ=255)
aTCCGGCAATAATAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgtgt < 1:2487036/100‑1 (MQ=255)
gCAATAATAGGTTCCAGCGTCACGATTT‑TT‑TTATCTCTTAAAGCAAGCACTGCTTTTACGGCTTGCTTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAt > 2:2112817/1‑100 (MQ=255)
aataatAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTg < 2:519994/100‑1 (MQ=255)
aataatAGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTACTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTg < 1:526598/100‑1 (MQ=255)
ataataGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGc > 1:828322/1‑100 (MQ=255)
ataataGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGc < 2:2879113/100‑1 (MQ=255)
taataGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGcc > 1:2967425/1‑100 (MQ=255)
aataGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGccc < 1:1264695/100‑1 (MQ=255)
ataGGTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTAGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGcc > 2:1338483/1‑98 (MQ=255)
ggTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTAGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCAttt > 1:2742212/1‑100 (MQ=255)
gTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc < 2:1363850/100‑1 (MQ=255)
gTTACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGACTGAACACTATTGCCACAAAAAAATCACACGTGTATCATTGCCCATTTc > 1:2534506/1‑100 (MQ=255)
ttACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCt < 2:548804/100‑1 (MQ=255)
tACAGTGTCACGTTTT‑TT‑TTTTTTTTTTAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCt > 2:884370/1‑99 (MQ=255)
tACAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg < 2:424619/100‑1 (MQ=255)
aCAGTGTCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGc > 1:2921186/1‑100 (MQ=255)
gtgtCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCa > 1:763759/1‑100 (MQ=255)
gtCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTc < 2:2469831/97‑1 (MQ=255)
gtCACGTTTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg > 1:1692834/1‑100 (MQ=255)
|
TCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑TTT‑TT‑TTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATG > NC_000913/1665090‑1665281
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
