Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F256 I0 R1
|
328 |
102.7 |
5123138 |
93.4% |
4785010 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,665,195:1 |
(T)7→8 |
100% |
intergenic (+75/‑120) |
dmsD → / → clcB |
twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,665,188 | 1 | . | T | 93.3%
| 238.0
/ 10.1
| 75 | intergenic (+68/‑127) | dmsD/clcB | twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
| Reads supporting (aligned to +/- strand): ref base . (2/3); new base T (33/37); total (35/40) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCA > NC_000913/1665091‑1665286
|
ccTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑t > 2:1709806/1‑100 (MQ=255)
gTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tt‑tt > 1:1102726/1‑100 (MQ=255)
gTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tt‑tt > 2:598502/1‑100 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tt‑tttt < 2:989928/100‑1 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tt‑tttt > 1:1376641/1‑100 (MQ=255)
ggTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCCCTAATAGGTTACAGGGTCACG‑‑t‑tt‑ttt > 2:96087/1‑96 (MQ=255)
ggTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATCGGTTACAGTGTCACG‑‑t‑tt‑tttttat > 1:808459/1‑97 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tt‑tttttatc < 2:784280/100‑5 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tt‑tttttatc < 2:1809423/100‑5 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tt‑tttttatc < 1:1556703/100‑5 (MQ=255)
ttAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tt‑tttttttct > 2:332253/1‑95 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTATCACG‑‑TCTT‑TTTTATCTCtt > 2:2110710/1‑100 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTaa < 2:142383/100‑1 (MQ=255)
cgatctttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTaaa < 1:1059391/95‑1 (MQ=255)
cGCTGTTTCGATAGGATCACCGTAATATTGCCGGATTGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTaaa < 2:597935/100‑1 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGAGGATTACGCGCAATCCGGCAATAAGAGGTTAGAGTGTCACGT‑T‑TT‑TTTTATCTGTTaa > 2:1281254/1‑98 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAg > 1:1440994/1‑100 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAg < 1:875496/100‑1 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAg < 1:623991/100‑1 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TT‑TTTTATCTCTTAAAgc < 1:130143/100‑1 (MQ=255)
tGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAgca < 1:2011907/100‑1 (MQ=255)
gTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAgcac > 1:1387699/1‑100 (MQ=255)
gTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAgcac > 1:393087/1‑100 (MQ=255)
gTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAgca > 1:2123622/1‑99 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTaaaagatcg > 2:1059383/1‑94 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAgcacgc < 1:2273842/100‑1 (MQ=255)
ccgatctggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAgcacgc < 1:91648/93‑1 (MQ=255)
aGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCt > 1:1002945/1‑100 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAgcacgcagatcgg > 2:91647/1‑94 (MQ=255)
aCCGTCCTATTGGCGGATGGTGAGGATTACGCTCTATCTGGCCATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGc < 2:1506207/99‑1 (MQ=255)
cGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGc < 2:1734506/100‑1 (MQ=255)
tatTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTAGcc > 2:1893744/1‑100 (MQ=255)
atTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGcc > 1:2339995/1‑100 (MQ=255)
ttGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTAGCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCctc < 1:981737/100‑1 (MQ=255)
tGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCctct > 1:621287/1‑100 (MQ=255)
gCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtt > 2:1687249/1‑100 (MQ=255)
ccGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCttt < 2:258287/100‑1 (MQ=255)
cGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGTCCTCTTTTg > 2:1017591/1‑100 (MQ=255)
ggATGGTGACGATTCCGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTg < 1:859483/100‑1 (MQ=255)
ggATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTg < 2:107188/100‑1 (MQ=255)
ggATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTg > 1:792261/1‑100 (MQ=255)
ggATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTg < 2:1163540/100‑1 (MQ=255)
ggATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTg > 1:2209931/1‑100 (MQ=255)
tGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCg < 1:147591/100‑1 (MQ=255)
ggTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGc < 1:1545517/100‑1 (MQ=255)
ggTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGc > 1:1389632/1‑100 (MQ=255)
tGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaa > 1:131405/1‑100 (MQ=255)
gACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaa > 1:1072835/1‑100 (MQ=255)
cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt > 1:1142291/1‑100 (MQ=255)
aTTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAg < 1:1775922/100‑1 (MQ=255)
aTTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAg > 1:369787/1‑100 (MQ=255)
ttACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGt > 1:414631/1‑100 (MQ=255)
aCGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCg > 1:1202259/1‑100 (MQ=255)
gcgcAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGcc < 2:1892769/100‑1 (MQ=255)
gcgcAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGcc < 2:1326733/100‑1 (MQ=255)
cAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgt > 2:1428876/1‑100 (MQ=255)
aaTCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgtg < 1:1428887/100‑1 (MQ=255)
aTCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgtgt > 2:2342702/1‑100 (MQ=255)
tCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGTACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGtt > 2:1944979/1‑100 (MQ=255)
tCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGtt < 1:1368722/100‑1 (MQ=255)
ccGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGttt < 2:2479330/100‑1 (MQ=255)
ccGGCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGttt < 1:1324709/100‑1 (MQ=255)
ggCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCa < 1:138348/100‑1 (MQ=255)
ggCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCa > 2:1776791/1‑100 (MQ=255)
ggCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCa < 2:1516212/100‑1 (MQ=255)
gCAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCCCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAt > 1:1833984/1‑100 (MQ=255)
cAATAATAGGTTACAGTGTCACGT‑T‑TT‑TTTTATTTCTTATTTCATTCTCTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAtt > 1:1750718/1‑100 (MQ=255)
aataatAGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTg < 1:598509/100‑1 (MQ=255)
taataGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGcc < 2:583978/100‑1 (MQ=255)
aataGGTTACAGTATCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGccc < 1:621789/100‑1 (MQ=255)
ataGGTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCa < 1:1607481/100‑1 (MQ=255)
gTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc > 1:1853385/1‑100 (MQ=255)
gTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc > 1:1552234/1‑100 (MQ=255)
gTTACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc > 1:908924/1‑100 (MQ=255)
tACAGTGTCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg > 1:2071952/1‑100 (MQ=255)
actgtgtCCCGT‑T‑TT‑TTTTATCTCTCAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGc < 1:2163334/97‑1 (MQ=255)
gtgtCGCGT‑T‑TT‑TTTTATCTCTTAGAGCCCGCACCGCTTTTGCGCCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTG‑CCATTTCTGCTc < 2:1925571/98‑1 (MQ=255)
gtgtCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCa < 1:1776804/100‑1 (MQ=255)
gtgtCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCa < 1:181884/100‑1 (MQ=255)
tgtCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCGCTTTTGCCGCAAAATAGTCGCACGTGTTTCATTGCCCATTTCTGCTCAt < 2:156725/100‑1 (MQ=255)
tgtCACG‑‑T‑TTATGTTATCTCTTCAAGCACGCACTGCTTTTGCGGCTGGCCTCTTGTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGc < 1:857838/96‑1 (MQ=255)
gtCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 1:948407/100‑1 (MQ=255)
gtCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg > 2:2074512/1‑100 (MQ=255)
gtCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 1:1747252/100‑1 (MQ=255)
tCACGT‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGc > 1:2425681/1‑100 (MQ=255)
cG‑‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGcatca < 2:2017138/100‑1 (MQ=255)
|
CCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCA > NC_000913/1665091‑1665286
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
