Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F56 I0 R1
|
215 |
141.2 |
6785521 |
95.3% |
6466601 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,665,195:1 |
(T)7→8 |
100% |
intergenic (+75/‑120) |
dmsD → / → clcB |
twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,665,188 | 1 | . | T | 93.6%
| 250.6
/ 10.3
| 78 | intergenic (+68/‑127) | dmsD/clcB | twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
| Reads supporting (aligned to +/- strand): ref base . (3/2); new base T (28/45); total (31/47) |
| Fisher's exact test for biased strand distribution p-value = 3.81e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 |
TCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCA > NC_000913/1665090‑1665286
|
tCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTTCAGTGTCAC‑G‑‑t < 1:1774592/100‑1 (MQ=255)
ccTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑tt > 1:3113172/1‑100 (MQ=255)
gTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGCTTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑ttttt > 1:303091/1‑100 (MQ=255)
tCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑tttttt < 2:2504211/100‑1 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑ttttttt > 1:105791/1‑100 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑ttttttt > 1:275871/1‑100 (MQ=255)
cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑tttttttta < 2:1176612/100‑3 (MQ=255)
cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑tttttttta < 1:135759/100‑3 (MQ=255)
cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑tttttttta < 2:2884793/100‑3 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑ttttttttatc < 1:2122814/100‑5 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑ttttttttatc < 2:2610387/100‑5 (MQ=255)
tAAACCGCTGTTTCGATAGGATCACCGTAATATTGCTGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑Atctc > 2:2385216/1‑100 (MQ=255)
tAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑Atctc < 2:1894319/100‑1 (MQ=255)
tAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑tttttttt > 1:129896/1‑94 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCtt > 2:3331871/1‑100 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTaa < 1:263216/100‑1 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTaa < 1:441011/100‑1 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTaa > 2:2467277/1‑100 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTaa > 2:2124998/1‑100 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAg < 2:2116740/100‑1 (MQ=255)
cTGTTTCGATAGGATCACGATAATATTGCCGGATGGTGATGATTACGCGCAATCCGGTATTAATATGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCGCTTAAAg < 1:2137039/99‑1 (MQ=255)
tGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTCTCAC‑GT‑TTTTTTT‑ATCTCTTAAAgca < 2:2057721/100‑1 (MQ=255)
gTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAgcac < 1:529142/100‑1 (MQ=255)
gTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAgcac > 2:489041/1‑100 (MQ=255)
acgctcttccgATCTCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAgcac < 1:119697/90‑1 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAgcacgc > 1:2603109/1‑100 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAgcacgcac < 2:2023898/100‑1 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAgcacgcac > 2:1537478/1‑100 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAgcacgcac < 2:275872/100‑1 (MQ=255)
gtaagactCAACGTAACATTGCAGGATGGTGAAGATTAAGATAAATCTGACAATTATAGGTTACAATGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAgcacgcac < 1:1683093/92‑1 (MQ=255)
aGGTTCACCTTAAAATTGCCGGTTGGGGACGATTACGCGAAACCCGGCAATAATAGGTTACGGTGTCCC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGc < 2:129896/99‑1 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCtt > 1:1570710/1‑100 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCtt < 2:1412652/100‑1 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCtt > 1:1328850/1‑100 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCtt < 2:2677764/100‑1 (MQ=255)
ggATCACCGTAATATGGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCtt < 2:545421/100‑1 (MQ=255)
gATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTACAGCACGCACTGCttt > 1:1044083/1‑100 (MQ=255)
aTCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCtttt < 2:3074204/100‑1 (MQ=255)
tCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTg < 2:1325506/100‑1 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGc > 1:3150510/1‑99 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCg < 2:429200/100‑1 (MQ=255)
aCCGTAATATTACCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑AT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCg < 2:2391142/100‑1 (MQ=255)
ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCgg > 1:1177511/1‑100 (MQ=255)
aaTATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTgg < 1:443032/100‑1 (MQ=255)
aaTATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTgg < 1:1287192/100‑1 (MQ=255)
tatTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGcc < 1:1355573/100‑1 (MQ=255)
atTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCct > 2:2557477/1‑100 (MQ=255)
gCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtt < 1:635456/100‑1 (MQ=255)
ccGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCttt < 2:2265007/100‑1 (MQ=255)
cGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtttt < 1:3306824/100‑1 (MQ=255)
tGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGccn < 2:2450351/100‑2 (MQ=255)
gACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGTACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaa < 1:1809873/100‑1 (MQ=255)
gACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaa > 2:1153753/1‑100 (MQ=255)
gACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaa < 1:2467258/100‑1 (MQ=255)
aCGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaaa > 2:723435/1‑100 (MQ=255)
cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt > 2:982788/1‑100 (MQ=255)
gATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATa < 2:739250/100‑1 (MQ=255)
ttACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGt > 2:1359895/1‑100 (MQ=255)
aCGCGCAAGCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCg < 2:753162/100‑1 (MQ=255)
cgcgCAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGc > 2:2665969/1‑100 (MQ=255)
gcgcAATCCGGCAATAATAGGTTACAGAGTCACGG‑‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGct > 2:2698936/1‑99 (MQ=255)
cgcAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGccc < 1:1258309/100‑1 (MQ=255)
cgcAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGccc > 2:1002694/1‑100 (MQ=255)
gcAATCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCg < 2:3316540/100‑1 (MQ=255)
ccaTCCGGCAATAATAGGTTACTGTGTCAC‑GTTTTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGccc < 2:234639/97‑1 (MQ=255)
aTCCGGCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgtgt > 2:1758799/1‑100 (MQ=255)
ggCAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTTCCGCAAAATAGTCGCCCGTGTTTCa > 1:2659959/1‑100 (MQ=255)
cAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAtt > 2:1232054/1‑100 (MQ=255)
cAATAATAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAt > 1:798906/1‑99 (MQ=255)
aataatAGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTg < 1:2455467/100‑1 (MQ=255)
ataataGGTTACAGTGTCAC‑GT‑TTTTTTT‑TTTTTTTTAAACACGCACTGCTCTTCCGGCTTGCCTCTTTTGCCGGAAACTAGTCGCCTGTGTTTCATTGc > 1:970495/1‑100 (MQ=255)
ataataGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGc < 2:2719725/100‑1 (MQ=255)
taataGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGTTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTggc < 2:2292685/100‑3 (MQ=255)
taataGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGcc < 2:2147920/100‑1 (MQ=255)
ataGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCa < 1:3331843/100‑1 (MQ=255)
aGGTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCAtt > 2:1818639/1‑100 (MQ=255)
ggTTACAGTGTCAC‑G‑‑TTTTTTTAATCTCTTAAAGCACGCACTGCTTTTGCGGCTGACCTCTTTTGCCGAAAAATAGTCGCCCATGTTTAATTGcccct > 1:1215889/1‑96 (MQ=255)
gTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc < 2:2484740/100‑1 (MQ=255)
gTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc > 2:342743/1‑100 (MQ=255)
gTTACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc < 2:2159019/100‑1 (MQ=255)
tACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg > 2:1305370/1‑100 (MQ=255)
tACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg > 2:84210/1‑100 (MQ=255)
tACAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTg < 2:963061/100‑1 (MQ=255)
aCAGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGc < 1:1286275/100‑1 (MQ=255)
aGTGTCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTc < 1:668320/100‑1 (MQ=255)
gtgtCAC‑G‑‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCAt > 1:1480660/1‑100 (MQ=255)
tgtCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTc < 2:2633432/98‑1 (MQ=255)
tgtCAC‑G‑‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 2:1072197/100‑1 (MQ=255)
gtCAC‑GT‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 1:982785/100‑1 (MQ=255)
c‑G‑‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGcatca < 1:2686858/100‑1 (MQ=255)
|
TCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCAC‑G‑‑TTTTTTT‑ATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCA > NC_000913/1665090‑1665286
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
