Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,665,195:1 |
(T)7→8 |
100% |
intergenic (+75/‑120) |
dmsD → / → clcB |
twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,665,188 | 1 | . | T | 98.1%
| 356.9
/ ‑0.4
| 107 | intergenic (+68/‑127) | dmsD/clcB | twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base T (48/57); total (49/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 |
Only 100 of 127 total aligned reads displayed.
TCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGC > NC_000913/1665090‑1665282
|
tCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACg > 1:1951244/1‑99 (MQ=255)
gaaacagcgGTTTAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑t > 1:1703128/7‑100 (MQ=255)
cTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tt > 2:2620853/1‑100 (MQ=255)
tGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑ttt > 2:3574100/1‑100 (MQ=255)
gTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttt > 2:1428853/1‑100 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttttt < 1:3653776/100‑1 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttttt < 2:1512681/100‑1 (MQ=255)
gctgTTGAATCGCGGTTTCGATAGTGTCACCGTAATGTTGCCGGATCGTGTCGATTGCGCGCTATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttttt < 1:1008507/96‑1 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑ttttttt > 2:3415831/1‑99 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑ttttttt > 2:3502197/1‑99 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttttt < 1:3733107/99‑1 (MQ=255)
cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑ttttttta < 2:345740/100‑3 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttttttatc > 2:2443043/1‑96 (MQ=255)
tAAACGGCTGTTTCGATAGGATCAGCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑t‑tttttttatc < 1:2714855/98‑5 (MQ=255)
tAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTAtctc > 1:429986/1‑100 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCtt < 2:3722783/100‑1 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCtt < 1:1802639/100‑1 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCtt > 1:8328/1‑100 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTaa > 2:3599404/1‑100 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTaa > 2:3138245/1‑100 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTaa > 1:2313700/1‑100 (MQ=255)
cGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTaaa < 2:283451/100‑1 (MQ=255)
cGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTaaa > 1:2287931/1‑100 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAg < 2:2434246/100‑1 (MQ=255)
cTGGTTCGATAGGATCACCGTAACATTTTCGGATTTTGACGATTACGCTCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAg < 1:1208057/99‑1 (MQ=255)
tttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAgcacg < 2:1133078/100‑1 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAgcacgcac > 2:3938313/1‑100 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAgcacgcac < 1:2708607/100‑1 (MQ=255)
ggtAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGTAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACt > 2:2889926/3‑100 (MQ=255)
gATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACt > 2:1050954/1‑100 (MQ=255)
gATAGGATCACCGTAATATTGCCGGATGGTGACGAGTACGCGCAATCCGGCAATAAGAGGTTACAGTGTCAGGT‑T‑TTTTTTATCTCTTAAAGCACGCACt > 1:844805/1‑100 (MQ=255)
aTAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTg < 1:3471403/100‑1 (MQ=255)
tAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGc > 2:2259184/1‑100 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCCATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCAAGCACTGCtt > 1:1773914/1‑100 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATTTCTTAAAGAACGCACtac > 1:431593/1‑96 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCtt > 2:2489232/1‑100 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCtt > 1:2797808/1‑100 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCtt < 2:3806278/100‑1 (MQ=255)
gATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAATCACGCACTGCttt < 2:2904236/100‑1 (MQ=255)
tCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTg < 2:3154422/100‑1 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCg < 2:3990957/100‑1 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCg < 2:3595723/100‑1 (MQ=255)
ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCgg > 2:2173936/1‑100 (MQ=255)
ccGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCgg < 2:3514041/100‑1 (MQ=255)
gTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCt > 1:2752718/1‑100 (MQ=255)
tAATATTGTAGGATGGTGACGATTACGCGCAAGCCGTCAAGAATAGGTTACAGTGTCTCGT‑T‑TTTTTTATCTCTGAAAGCACGCACTGCTTTTGCGGCTg < 1:1477972/100‑1 (MQ=255)
aaTATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTgg < 1:2166925/100‑1 (MQ=255)
ttGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTTT‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCct < 1:4207781/100‑1 (MQ=255)
ttGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑TGTTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCctc < 1:1290116/100‑1 (MQ=255)
tGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCctct < 2:3271109/100‑1 (MQ=255)
gCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtt > 1:2823809/1‑100 (MQ=255)
ccGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCttt > 1:4089258/1‑100 (MQ=255)
ccGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCttt > 2:3062686/1‑100 (MQ=255)
cGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCttt < 1:931537/99‑1 (MQ=255)
ggATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTg < 2:303231/100‑1 (MQ=255)
ggATGGTGACGATTACGCGCAATCCGGCAAGAATAGGTTACAGTGTCACGT‑T‑TTTTTTATGTCTTAAAGCACGCACGGCTTTTggtgctagc > 1:2447972/1‑84 (MQ=255)
gATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGc < 1:3000537/100‑1 (MQ=255)
tGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGc < 2:3364622/98‑1 (MQ=255)
tGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaa > 2:543901/1‑100 (MQ=255)
gACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaa < 1:3574087/100‑1 (MQ=255)
cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt < 1:3256350/100‑1 (MQ=255)
aTTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTTTCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGcc > 1:2408759/1‑91 (MQ=255)
aTTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTACGTTTTAAAGCACCCCCTGCTTTTGCGGTTGGCCTCTTTTGCGGCAAAATAg > 2:2987836/1‑100 (MQ=255)
ttACGCGGAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCTCTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGt < 1:2289146/100‑1 (MQ=255)
tACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTc < 1:4177109/100‑1 (MQ=255)
aCGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCg < 1:1645582/100‑1 (MQ=255)
aCGCGCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCg > 2:1407568/1‑100 (MQ=255)
aCGCGCAATCCGGCAACAATAGGTTACAGTGACACGT‑T‑TTTTTTATCTCTTAAAGCAAGCAATGCTTGTGTGGATAGCCTCTTTTGCCCCAAAAGAGt > 1:108840/1‑98 (MQ=255)
cgcgCAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGc > 2:1903707/1‑100 (MQ=255)
gcAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCg < 1:1714644/100‑1 (MQ=255)
cAATCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgt < 1:1575408/100‑1 (MQ=255)
tCCGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGtt < 2:2910498/100‑1 (MQ=255)
ccGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGtt < 2:1887767/99‑1 (MQ=255)
cGGCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTc > 2:3251750/1‑100 (MQ=255)
ggCAATAATAGGTTACGGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCa < 1:128651/100‑1 (MQ=255)
ggCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTTTCTCTTAAAGCACGCACTGCTTGTGCGGCTGGCCTCGTTTTCCGCGAAATAATCGCCCgtgt > 1:1603025/1‑96 (MQ=255)
ggCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCTCCCGTGTTTCa > 1:1535798/1‑100 (MQ=255)
ggCAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTGTTGCCGCAAAATAGTCGCCCGTGTTTc < 1:2436796/99‑1 (MQ=255)
cAATAATAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAtt > 2:280761/1‑100 (MQ=255)
aataatAGGTTACAGTGTCACGT‑T‑TTTTTTTTCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAtt < 1:1280359/99‑1 (MQ=255)
aataatAGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTg < 2:2938713/100‑1 (MQ=255)
ataataGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGc < 2:3376095/100‑1 (MQ=255)
taataGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGcc < 2:2735439/100‑1 (MQ=255)
aataGGTTACAGTGTCACGT‑T‑TTTTTTTTCTTTTAAAGCACGTACTGCTTTTGCGGCTGGCCTCTTTTTCCGCAAAATAGTCGCCCTTGTTTCAtt > 1:3841817/1‑96 (MQ=255)
aataGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGccc < 1:3958157/100‑1 (MQ=255)
ataGGTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGccc > 1:4214411/1‑99 (MQ=255)
ataGGTTAAAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCa < 2:1116396/100‑1 (MQ=255)
aGGTCAAAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGTCTGGCCTTTTTTGCCGCAAAATAGTCGCCCGTGTTTCCTTGCCCAtt > 1:3532360/1‑100 (MQ=255)
ggTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCAttt > 1:2366800/1‑100 (MQ=255)
ggTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCAttt > 2:4121708/1‑100 (MQ=255)
gTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc < 1:1739503/100‑1 (MQ=255)
gTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc > 2:129609/1‑100 (MQ=255)
gTTACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCCCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc < 2:2428042/100‑1 (MQ=255)
tACAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTcgg < 2:2902196/100‑3 (MQ=255)
cAGTGTCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCt > 2:4266193/1‑100 (MQ=255)
gtCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 1:2057496/100‑1 (MQ=255)
gtCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 2:2980360/100‑1 (MQ=255)
gtCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 2:1634479/100‑1 (MQ=255)
gtCACGT‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 2:2147642/100‑1 (MQ=255)
tCACGT‑T‑TTTTTTATCTCTTAAAGCACGAACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 1:122857/99‑1 (MQ=255)
|
TCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑‑T‑TTTTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGC > NC_000913/1665090‑1665282
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
