Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
150 |
105.7 |
2655328 |
79.3% |
2105675 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,560,455:1 |
+G |
100% |
intergenic (‑2/+1) |
glpR ← / ← glpR |
pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,560,455 | 1 | . | G | 96.4%
| 260.3
/ ‑1.8
| 82 | intergenic (‑2/+1) | glpR/glpR | pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| Reads supporting (aligned to +/- strand): ref base . (3/0); new base G (55/24); total (58/24) |
| Fisher's exact test for biased strand distribution p-value = 5.52e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| Rejected as polymorphism: E-value score below prediction cutoff. |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
CAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑C‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAC > NC_000913/3560220‑3560682
|
cAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCCCCGCCATGAT‑GG‑cgcc > 1:1052098/1‑236 (MQ=255)
ttAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCGGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGAtacg > 2:1016417/1‑236 (MQ=255)
ttAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGCGCAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGTGCGATGCGCTCTTCTTCTTCGGTCTGCGCGGCCT‑TGGGTCCGGGCCACGCCGGGTTTACCGACCTGTA‑CAGGAGCG‑CAGCCCCGCCATGCT‑GG‑CGCAGGAACaa > 2:442056/1‑238 (MQ=255)
aGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCAGGAT‑GG‑CGCAGGATCAGGt > 1:278778/1‑239 (MQ=255)
agaTTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACATTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGGGTTAACCGAACTGGC‑AGTCAGAG‑CCGCGCCCCACTGAT‑GA‑CGCCGGAACAGGTTTTGCTcga > 2:826729/1‑236 (MQ=255)
tttgttgGGGACAAGGCGCAAGTGGTTGTTATTGAGCAGGGCGTGCGCTCCCGCTTCCGGGGTGGGGCCGATATCGATAAACAGCGTCGAGCCATTGGGGT‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGcc < 1:1248213/237‑1 (MQ=255)
gttgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCCCCCGc > 1:224554/1‑238 (MQ=255)
tgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCa > 1:990398/1‑239 (MQ=255)
aaTGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGGGCCACGGCGGTTTAACCGAACTGGC‑AGGCAGCC‑CCGCCCCCCCCTAAT‑GG‑CGCCGGACCAGGTTTTGCTCCGCCAGccaatgggggg > 2:646421/1‑229 (MQ=255)
tGCGCAACTTGCTGAGATTGAGCAGTGCGTGCGCTACCGCTTGCGGCGTGGTGCAGATATCGAAAAACACCGACGACCCATTGGGGA‑TTTGCCTGGCAACCTTACGGGCGATGCGCTCTTTTTCTTCGGTCTGGTTGGCCT‑TGCGATCGTCCCACGGCGTGTTTACCGTACTGGA‑AAGCTGCA‑CCCCACCACACTGGT‑GC‑CGCAGGATCAGGTTTTTGTTCGCCAGCCCCTTGAgtctg > 2:729512/1‑235 (MQ=255)
tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCCTTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATTCGCTCTTTTTCTTCGGCCTGGGTGTCCT‑TGCGCTCGGGCCACGGGGTGTTAAACGAACTGGA‑AGGCGGTC‑CACCCCCGCCCCGATGGG‑C‑CAGCACCCGGTTTTGCCGCCCCACCTCAtgatggtc > 2:58279/1‑231 (MQ=255)
tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAgg > 1:255414/1‑212 (MQ=255)
tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTcg > 1:161121/1‑239 (MQ=255)
tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAG‑GG‑CGCAGGGACAGGTTTTGATCCCCCACCTCAATGGGGGcg > 2:1209845/1‑239 (MQ=255)
tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTCCCACGCGGTGTTAACCGAACCGGA‑CGGCAGCG‑CCGCACCTCCCTGAT‑GGCC‑CAGACTCAGGTGTTGCCCCCCCAGCTCAtcacggcg > 2:1142914/1‑231 (MQ=255)
gcAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcgg > 1:909097/1‑239 (MQ=255)
gcAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCAAGCTCATTGAGGTCgggg > 1:1183041/1‑239 (MQ=255)
ttGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGTCGATCCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCTGGTTAACCGAACTGGA‑AGGCAGCG‑CCGAACCGCCCTGAT‑GGCC‑CCGAACCAGGTTTTGCTCCGCCCGCGCATTGAGGGCGAGGGGaaa > 2:1244394/1‑238 (MQ=255)
tgtgATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGGTCCGCCAGCCCCTTGAGGGCGCGGCGAATGGt > 1:912252/1‑238 (MQ=255)
cAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTTCTCCGCAAGCTCATTGTGGTCGCGGGGAATAGTCTGGGGGcggc > 2:282523/1‑236 (MQ=255)
gcgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGga > 1:1121148/1‑239 (MQ=255)
cgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGGGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCGGGTTTTGCTCCGCCAGCCCATGGAGGGCGCGGCGAAAAGTCTgcgggcgggcgggg > 2:1147449/1‑237 (MQ=255)
gggcgcTCCCGTTTCCGGGGTGGTGCAGATAGTGATAAACAGCGTCGGGCTTTTGGGGT‑TTTGCCCCGCCCTTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCGGGGGGGCCT‑TGCGATCGTGCCAGGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGgag < 1:1290435/236‑1 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGC‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTATCCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCACCTCATTTAGGCCGCGGCGACTAGTCTGCGGGCTGCCGGCGCAA‑TGc > 1:658370/1‑237 (MQ=255)
cTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCCCATTCAGGTCGCGGCGAATAGTCTGCGGGCTGACGGCGAAA‑TGCTCTAc > 1:942600/1‑238 (MQ=255)
cTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCCCCCTGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCCTTCAGGCCGCCGCCAATAGTAGGCGGGCGGACGGAGaaagactcaaca > 2:119413/1‑230 (MQ=255)
cccGGCGTGGTGCCGATTCTGATAAACAGCGTCGCGCCGTTGGGTT‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTTTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAg < 1:747311/238‑1 (MQ=255)
ccGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGt > 1:1025816/1‑171 (MQ=255)
atCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACAt > 1:680084/1‑239 (MQ=255)
cGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCGGCCCGCTCATTCAGGCCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TACCTAACCAACTCTTCGGGACtataaaaa > 2:936605/1‑232 (MQ=255)
gATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATaa > 1:836802/1‑238 (MQ=255)
gCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGt > 1:1204529/1‑239 (MQ=255)
cGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTTCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTCCTGtt > 1:526807/1‑239 (MQ=255)
cGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtt > 1:774934/1‑239 (MQ=255)
cGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTCCTGtt > 1:577834/1‑239 (MQ=255)
gTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGttt > 1:300155/1‑239 (MQ=255)
gggcaaTTGGGTA‑TTGCCCCCGCCCTTGTGCGGGCGATGCCGTCTTTTCCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTACCCGACCTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAAc < 1:282523/234‑1 (MQ=255)
tctttGGGTT‑TTTGCTCCGTCGTTTTGGGGGCGTGGCGCTCTTTTTCTGCGGTGTGGGTGGCTC‑TGGGACCGGGCCACGGGGTGTAACCCGAACGGAA‑AGGCGGCG‑CGGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAg < 2:909097/236‑1 (MQ=255)
ctttGGGGT‑TTTGCCCCGCCATTTGGCGGGCGATGCGCTCTTTTTCTTGGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACGGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAg < 1:764617/236‑1 (MQ=255)
ttgggggT‑TTTGCTCCGCCGCTTGGGGGGCGGTGCGCTCTTTTTCTGCGGTCGGGGGCGCCG‑CGCGATCGCGCCGGGGGTTGTTAACCGAACGGGA‑CGCCCGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGtt < 2:836802/236‑1 (MQ=255)
cttGGGGATTTTCCTCCCCCTCTTGGCGGAGGTTGGGTTCTTTTTCTTCGGTCTGGGTGGCCT‑GGCGATGGTGCCACGGGGTGTTAACCGAACTGGA‑GGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAg < 1:755558/237‑1 (MQ=255)
ttGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTc > 1:287026/1‑239 (MQ=255)
a‑TTTGCCCCGCCACTTTGCGGGCAATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGGGTTAACAGCACTGGA‑AGCCAGCG‑CGGCACCGCAATCAT‑GG‑CGCAAGATCAGATTTTGCTCCGCCGGCACACTGTGATCGCGCCGAATAGTCTGCCGGCTCACGGAGAAACTGCT‑TACCCACCCTTTCTAACGCACATAACCCGGGCGTTTAACAAGTTCGacaag > 2:994930/1‑238 (MQ=255)
ttggCTCCGCCGCTTGGGGGGCGTGGCGTTCTTTTTCTCTGGTGGGGGGGGCTG‑GGGGATCGGGCCGCGGGGTGTGAACGGAACTGGA‑GGGCAGCC‑CCCCACCGCCATGAT‑GG‑CGCAGGTTCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGataata < 2:161121/236‑1 (MQ=255)
ttGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCCGCGGTTTAAc > 1:851279/1‑225 (MQ=255)
ttGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCCCGGCGAATAGTCTGCGGGCTGACGGGGAAA‑TGCTCCACCAGCTCTTCGGGATTGACATAACCCTGCTGTTTACACAATTCGAAAAAAc > 2:298787/1‑239 (MQ=255)
tGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAAAAcc > 2:107580/1‑239 (MQ=255)
tccccGCCACTGTGGGGGCCATGCCCTTTTTTTCTTGGGTCGGGGGGGCCT‑TGCGACCGGGCCGCGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCg < 1:1147449/236‑1 (MQ=255)
gcccccgcACTGTGCGGGCGTGCCGCTCTTTTTCTGGGGTCGGGGTGGCCT‑TGCGTTCGTGCCACGGGTTTTAAACCGAAGTGGA‑AGGCGGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCg < 1:1008240/232‑1 (MQ=255)
cccccccccttttGGGGGGGCTGCTCTTTTTTGCTTCGGTGTGGGGGCCCG‑TGGGGTGGGGCACGGGGGTGTAAACCGAA‑TGGACGGGCAGCC‑GCGCACCGGCAGGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCg < 2:345423/229‑1 (MQ=255)
ttGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGAAGT‑tg > 1:6787/1‑239 (MQ=255)
tGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGC‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGCCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACTTAACCCTGCTGTTTAAc > 1:1090998/1‑211 (MQ=255)
aTGCGCTCTTTTTCTTGGTTCGGGGTGGCCT‑TGCGATCGTGCCACGGGGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGtgtttgtt < 1:399048/238‑1 (MQ=255)
aTGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGCCGgag > 2:285240/1‑156 (MQ=255)
aTGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGgag < 1:285240/156‑1 (MQ=255)
ttcccttttttttttCGGTC‑GGGGGGCCTCTGCGATCGGGCCCGGGGGTGTTACCCGACCTGGA‑AGCCCGCC‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTc < 2:680084/232‑1 (MQ=255)
gcgcTCTTTTTCTTCGGTCTGGGAGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGCACTGGC‑AGCCAGCG‑CCGCCCCGCCATGAT‑GG‑CGCAGGTTCAGGTTTTGCTCCGCCCGCTCCTTGCGGTCGCGGCGACTAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTCACATAACCCTGCTGTTTAACCAGTTCCTTAGAACCGTTGTGCCGG‑TGTGTTGTTTTCa > 2:208577/1‑239 (MQ=255)
cgctttttttgCTTCGGCTGGGGGGGCCT‑TGCGGGCGTTGCCGGGGGTTGTAACCGAGC‑GGG‑AGGCACGGCCCGCACCGCCATGGT‑GG‑CGCAGGATCAGGTTTTGCCCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCa < 2:1204529/233‑1 (MQ=255)
ctTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAAACCTGCTGTTTAACCAGTTCGATAATACCGTTTTTACGG‑TGTGTTTGTTTCATTtat > 1:554956/1‑239 (MQ=255)
ttttttTGGGTGGGGGGGGCCT‑TGCGAGCGGGCCCGGGCGTTTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATaa < 1:1209845/239‑1 (MQ=255)
cGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGCTAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTTTAATTCCCTg > 1:137811/1‑239 (MQ=255)
gTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGCCATAACCCTGCTGTTTAACCAGTTCGATAATACCCTTGTGACGT‑TGTTTTTTTTTTTTTTAAAAAACCCTGGa > 2:735655/1‑239 (MQ=255)
ccT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttcg > 1:828795/1‑239 (MQ=255)
cT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGCAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTG‑CGTCTGTCTTTTTTTCCTTTATAAATCCCTGGAATTAtttttgt > 2:981534/1‑239 (MQ=255)
gTGCCACGGCGTGTTAACGGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATaa < 1:1014929/151‑1 (MQ=255)
gTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGc < 1:970061/124‑1 (MQ=255)
gTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGc > 2:970061/1‑124 (MQ=255)
gTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATCACGTTGTGCCGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCa > 1:938351/1‑239 (MQ=255)
gTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCAAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGCATTCTTTTCGTTTTCGCGCa > 1:454023/1‑239 (MQ=255)
tGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTTGGACCT‑TGTGTTTGTTTCTTTTATAAATCCCTGGAAATGTTTTCGTTTTCgcgctt > 2:1312170/1‑237 (MQ=255)
gCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCCTTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGCACTGACATAACCCTGCTGTTTAACCAGTACGTTAAAACCTTTTTGGCGT‑TGTGTTTGTTTCATTTATAATACCTAGGAATTATTTTTGTTTTCGCGCATTTAGGGa > 2:552108/1‑239 (MQ=255)
ctgtttACCCGATCGGAA‑AGGCTCCG‑CCGGACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGa < 1:278786/234‑1 (MQ=255)
gtgtTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAA‑TGCTCTACCACCTCTTCGGTACTGCCATAACCCTCCTGtt > 2:1014929/1‑151 (MQ=255)
tgtTAACCGAACTGGA‑AGGCTGCG‑CCGCACCGCCATGAT‑GG‑CGCCGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATATTCGGCGGGCTGACGGCGAAC‑TGCTCTACCACCCCTTCGGTACTGACATAACCCTGCGTTTTAACCATGTCGGTAGTCCCGTTGTGCAGC‑TTTGTTTGTTCCATTTCTAAATCCCAGGAATTATTTTCGTTTTCGCCCTTTGAGCGaaac > 2:1287572/1‑237 (MQ=255)
aCTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGCTAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACACAAGcc > 1:1143732/1‑239 (MQ=255)
aCTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGCCGT‑TGtgtttgt > 1:225138/1‑178 (MQ=255)
cg‑ccgcACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGATTTTGCTCATTGAGCGAATCAACAAAAGCCATCCCAAAAcc > 2:315162/1‑238 (MQ=255)
g‑ccgcACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAAccc < 1:107580/238‑1 (MQ=255)
cgcgcagccGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAAcc < 1:501552/231‑1 (MQ=255)
ccgcACCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCAc > 2:1155164/1‑239 (MQ=255)
aCCGCCATGAT‑GG‑CGCAGGATCAGGTTTTGCCCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGc < 1:310071/238‑1 (MQ=255)
gCCATGGT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAc < 1:1166457/239‑1 (MQ=255)
ccATGAT‑GG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCACTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACCGCAAAc > 1:1180062/1‑238 (MQ=255)
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CAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGA‑AGGCAGCG‑CCGCACCGCCATGAT‑GG‑C‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAA‑TGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGT‑TGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAC > NC_000913/3560220‑3560682
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
