Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A19 F91 I1 R1 26 61.7 2321240 90.8% 2107685 142.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,123,110 G→A P77L (CCA→CTA)  ftsN ← cell division protein FtsN

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,123,1100GA94.2% 144.8 / NA 54P77L (CCA→CTA) ftsNcell division protein FtsN
Reads supporting (aligned to +/- strand):  ref base G (0/2);  major base A (25/24);  minor base C (1/2);  total (26/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTGGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCGGGAGAAACCGC  >  NC_000913/4122971‑4123249
                                                                                                                                           |                                                                                                                                           
ttCCAGATGCTGGCGTTGCTGTGGTGTCAGTTGCTCCGGCGTTTGCACTTCACCACCGGCAGACGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTGCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTtagtg                                                                                                                                          <  2:490497/143‑1 (MQ=255)
ttCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTtagtg                                                                                                                                          <  1:19278/143‑1 (MQ=255)
ttCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTtagtg                                                                                                                                          <  1:324655/143‑1 (MQ=255)
 gcgagaagCTGACGTTGTTCTCGTGTCAGTTGCGCCGGCTTTTTCACTTCACCACCGGCAGAAGGTTCTGTGTGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTtagtgg                                                                                                                                         <  2:849116/140‑1 (MQ=255)
     gacgCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTGTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGt                                                                                                                                     <  2:315322/140‑1 (MQ=255)
      aagCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTc                                                                                                                                    >  2:334999/1‑143 (MQ=255)
         cTGACGTTTTTCTGCTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGt                                                                                                                                 <  2:813285/143‑1 (MQ=255)
              gttgttCTGGTGTCAGTTTCTCCGGCGTTTTCACTTCACTACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTGCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCg                                                                                                                            <  1:182918/143‑1 (MQ=255)
              gttgttCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCg                                                                                                                            <  2:984543/143‑1 (MQ=255)
              gttgtgCTGGTGGCAGTTGCGCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCg                                                                                                                            <  1:1061271/143‑1 (MQ=255)
                 gttCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGTCTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTc                                                                                                                         <  2:312720/143‑1 (MQ=255)
                       gtgtCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCCGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCGCtttg                                                                                                                   >  1:744/1‑142 (MQ=255)
                       gtgtCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTc                                                                                                                   >  1:184951/1‑143 (MQ=255)
                       gtgtCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGGTTTAGTGGTAGTCCGTTTCCGGTCCCTGTc                                                                                                                   >  2:1080755/1‑143 (MQ=255)
                        tgtCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCGGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTGTTAGTGGTAGTCCGTTTCCGGTGACTTTCt                                                                                                                  >  1:10191/1‑143 (MQ=255)
                          tCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACATTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTgg                                                                                                                <  2:921212/143‑1 (MQ=255)
                            aGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACGTTTCAGCTTTTTAATGTAGCGCCAGCGTTCTCCGGGTCGTAGTGGTACTCCGTGTCCGGCCACTTTCTGGCt                                                                                                              >  2:461993/1‑143 (MQ=255)
                                 ccccagCGTTTTCGCTTCACCCCCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCa                                                                                                         <  1:1024266/138‑1 (MQ=255)
                                      gCGTTTTCACTTCACCACCGGCAGAAGGTTCGGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCCGCGTTCTTCTGGGTTTAGTGGTCGTCCGTTTCCGGTCACTTGCTGGCTTTGCATCgac                                                                                                    >  2:48039/1‑141 (MQ=255)
                                         ttttCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCCCTTTCTTGCTTTGCAGCGtctcc                                                                                                 >  2:546200/1‑142 (MQ=255)
                                         ttttCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCg                                                                                                 >  1:1138219/1‑143 (MQ=255)
                                              acttcacCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGACTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTGCCGGActc                                                                                            >  1:509652/1‑143 (MQ=255)
                                                ttcacCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACtctt                                                                                          >  1:76544/1‑143 (MQ=255)
                                                    ccaccGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCttcttt                                                                                      <  1:815674/143‑1 (MQ=255)
                                                    ccaccGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCttcttt                                                                                      >  1:922425/1‑143 (MQ=255)
                                                      accGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCttctttct                                                                                    <  1:804223/143‑1 (MQ=255)
                                                       ccGGCAGAAGGTTCTTTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCGCTTTAATGTAGCGCCAGCGGTCGTCTGGTCCTCGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTGTCGGACTCttctttcgt                                                                                   >  1:631524/1‑141 (MQ=255)
                                                       ccGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTtctttctt                                                                                   >  1:31685/1‑143 (MQ=255)
                                                        cGGCAGTAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTGATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTtg                                                                                  <  2:930855/143‑1 (MQ=255)
                                                           cagctgtttCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGCAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGCCTCTTCTTTCTTGTGa                                                                               <  2:781367/136‑1 (MQ=255)
                                                           cAGAAGGTTCTGTGGGCGCACGCACTCCTGGCTCGCTCCTTTCCAGCTCTTTAATGTAGCTCCATCGTTCTTCTGGTTTTAGTGGTAGTCCGCTTCCGGCCACGGTCTGGCTTGGCAGCGTCTCGGACTCTTCTTTCTTGTGa                                                                               <  1:169627/143‑1 (MQ=255)
                                                              gaGGTTCTGTGGGCGCACGCAGCGCCTGCTGGCGACTCTCCAGCTCTTTGATGTGCCGCCAGTGTTCTTCTGGTATTAGTGGTAGTCCGTTTCCGGTAACTGTCTGGCTTTGCGGCGTCTCGGAATCTTCTTTCTTGTGATGc                                                                            <  2:31685/142‑1 (MQ=255)
                                                              aaGGTTCTGTGGGCGCACGCTCTGCCTGCTGGCGACTTTCCAGCTCTTTTATGTAGCGCCAGCGTTCTTCTGGTTTTCTTTGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGTAGCGTCTCGGATTCTTCTTTCTTGTGATGc                                                                            <  2:1025733/143‑1 (MQ=255)
                                                              aaGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGc                                                                            >  1:338460/1‑143 (MQ=255)
                                                                ggTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTCTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGCACTCTTCTTTTTTGTCATCCGt                                                                          >  2:434453/1‑143 (MQ=255)
                                                                      gtgGGCGCACGCTCTCCCGGCTGGCGTCTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTGTGGTTTTAGGGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGaa                                                                    <  2:97230/143‑1 (MQ=255)
                                                                       ggggCGCGCGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAg                                                                   <  1:71595/142‑1 (MQ=255)
                                                                            gcacgcacTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAg                                                              <  1:523369/143‑1 (MQ=255)
                                                                             cacgcacTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGa                                                             <  1:1080755/143‑1 (MQ=255)
                                                                             cacgcacTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGa                                                             <  2:1138219/143‑1 (MQ=255)
                                                                              acgcgcTCCCGGCTGGCTACGTTCCAGCTCTTTAGTGTAGCGCCAGCGTTCTTCTGGTTTTGGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGac                                                            <  2:140683/143‑1 (MQ=255)
                                                                                gcacTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTGGTGATGCGTAATGAAGTACAGacca                                                          >  1:328118/1‑143 (MQ=255)
                                                                                 cacTCCCGGCTGGGGACTTTCCCGCGCTTCGCTGGAGCTCCGGCGTGCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGaccac                                                         <  2:10191/143‑1 (MQ=255)
                                                                                  acTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCCGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTACTGACGTACAGaccacc                                                        >  2:497546/1‑143 (MQ=255)
                                                                                    tCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTCGTCCGTTTCCGGTCACTTTCTGGCTTTGCGGCGTCTCGGACTCTTCTTTCTTGTGCTGCGTACTGAAGTACATACCACCgt                                                      >  1:79689/1‑142 (MQ=255)
                                                                                         gCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAg                                                 <  1:546200/143‑1 (MQ=255)
                                                                                         gCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAg                                                 <  1:334999/143‑1 (MQ=255)
                                                                                                       aGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAAcggc                                   >  1:698757/1‑143 (MQ=255)
                                                                                                                 tGTAGCGCCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATa                         >  1:182069/1‑143 (MQ=255)
                                                                                                                   ttgcgcCAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGCACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGGCCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGc                       <  2:76544/141‑1 (MQ=255)
                                                                                                                   tAGCGCCAGCGTTCCTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACCTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGc                       <  1:1066317/143‑1 (MQ=255)
                                                                                                                      tcgcAGCGTTGTTCTGGTTTTGGGGGTGGTGAGTTGCCTGACTCTTGCGGGCTTTGCAGCGTCTCGGGCTCTTCTTTCTTGTGATGCGTAATGACGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGAc                    <  2:1121253/140‑1 (MQ=255)
                                                                                                                         cAGCGTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCAt                 >  1:659725/1‑143 (MQ=255)
                                                                                                                             gTTCTTCTGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCg             >  1:918032/1‑143 (MQ=255)
                                                                                                                               tcttctGGTTTTAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAACGTCACAAGACCGGCGGCAGCAATAGCGACCATAGCggg           >  1:696448/1‑143 (MQ=255)
                                                                                                                                    tGGGTTTCGTGGTAGTCCGTTTCCGGTCTCTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGGAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCGGGAGaaa      <  2:841342/143‑1 (MQ=255)
                                                                                                                                        tttAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCGGGAGAAACCgc  >  1:813852/1‑143 (MQ=255)
                                                                                                                                        tttAGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCGGGAGAAACCgc  >  1:548767/1‑143 (MQ=255)
                                                                                                                                           |                                                                                                                                           
TTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAGCGCCAGCGTTCTTCTGGTTTTGGTGGTAGTCCGTTTCCGGTCACTTTCTGGCTTTGCAGCGTCTCGGACTCTTCTTTCTTGTGATGCGTAATGAAGTACAGACCACCGATAAAGGTCACAAGAACGGCGGCAGCAATAGCGACCATAGCGGGAGAAACCGC  >  NC_000913/4122971‑4123249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A