Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F27 I0 R1
|
60 |
79.9 |
2053078 |
82.8% |
1699948 |
215.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,560,455:1 |
+G |
100% |
intergenic (‑2/+1) |
glpR ← / ← glpR |
pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,560,455 | 1 | . | G | 94.1%
| 199.7
/ 1.4
| 67 | intergenic (‑2/+1) | glpR/glpR | pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base G (45/18); total (47/20) |
| Fisher's exact test for biased strand distribution p-value = 5.77e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| Rejected as polymorphism: E-value score below prediction cutoff. |
CGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑C‑CA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAC > NC_000913/3560223‑3560682
|
cGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑c‑ccagg > 1:177651/1‑234 (MQ=255)
aGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCAGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGTTCGTGCCACGGCGGGTTTACCGCACTGGGAGGCACGGCCGCACCG‑CCCTGAT‑GG‑CGCA‑GGacacggt > 2:386962/1‑233 (MQ=255)
gTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCCCGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGc > 1:814352/1‑238 (MQ=255)
gTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGGTCAGGTTTTGc > 1:1006706/1‑238 (MQ=255)
ttgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGGTTTAACCGAACTGGAAGGCCGCGCCGACCCG‑CCATGAC‑GG‑CGCA‑GGATCAGGTTTTGTCCCGCCAGcc > 2:66405/1‑237 (MQ=255)
gtgcgtgcGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCCTGCT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACg > 1:907835/1‑239 (MQ=255)
tgcgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCCCGGCGAATAGTCTGCGGGCTGACgg > 1:869585/1‑239 (MQ=255)
tgcgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGCCTGGGGGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GGCC‑CC‑GGATCAGGTTTTGCTCCGCAAGGCCATTGAAGCAGCGGGGAAAAGTCGGCGGGCTGAggg > 2:361042/1‑239 (MQ=255)
gcgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCCGTAGT‑GC‑G‑CC‑GGATCAGGTTTTGTTCCGCCAGCCCCTTTGTGTCGGGGCGAAAAGTCTGGGGGGGGACgag > 2:861926/1‑237 (MQ=255)
gcgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCCGGTTTTGCTCCGCCAGCCCCTTTGGGGCGCGGCGAAAAGTCTGGGGGCTGACggg > 1:520635/1‑238 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGTTCAGGTTTTGCTCCGCCAGCTCATTGCGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGctc > 1:366202/1‑239 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGGGGTCGCGGCGAATAGGCTGCGGGCTGACGGAGAAATGc > 1:919333/1‑237 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGCCGGAGAAATgt > 1:214647/1‑236 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCCCATTGAGGTCCCGGCGAATAGTCTGCGGGCTGACGGGGAAATGctc > 1:138961/1‑239 (MQ=255)
aCCGCCTCCGGCGTGGTGCCGATATCGATAAACAGCGTAGAGCCATTGGGGCTTTGCTCCGCCACTTTGCGGGCGATCCGCTCTTTTTCTTCGGTCTGGGAGGCCTTGCGATCGTGCCACGGCGCGTTAACCGAACTGGAAGGCAGCGCCGCCCCG‑CCATGAT‑GG‑CGCA‑GGATCAGGGTTTGCTCCGCCCGCtactt > 1:79526/1‑193 (MQ=255)
cTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCCCCTTGAGGCCCCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCTCTAc > 1:996469/1‑238 (MQ=255)
tCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGCTCAGGTTTTGCTCCGCCAGCTCATTGCGGTCGCGGCGAATAGTCTGCGTGCTGCCGGAGAAATGCTCTACCa > 1:579271/1‑238 (MQ=255)
ccGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCCCACCC‑CCATGAT‑GG‑CGCA‑GGACCAGGGTTTGCTCCGCCAGCTCATTGAGGTCCCGGCGACTAGTCTGCGGGCGGCCGGGGAAAGGcctccccag > 2:95009/1‑230 (MQ=255)
cGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCACCTCATTGAGGTCGCGGCGACAAGTCTGCGGGTTGCCGGAGAAATGCTCTACCAGctct > 1:292197/1‑238 (MQ=255)
cGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCCTTGAGGTCGCGGCGCATAGTCTGCGGTCTGACGGAAAAATGCTTTACCAGCTCTTCGGTACTGACaaa > 2:361700/1‑236 (MQ=255)
gATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTTCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATaa > 1:62411/1‑238 (MQ=255)
cGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCCTTGGGGTCGCGGCGAATAGTCTGCGGGCTGACGGCGAAATGCTCTACCAGCTATTCGGACCTGACCTAACCCTGCTGtt > 1:658374/1‑239 (MQ=255)
cGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATa > 1:642253/1‑178 (MQ=255)
tCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTGGCTCCGCCAGCGCATTGCGGTCGCGGCGAATAGTCTTCGGGCTGCAGGAGAAATGCCGTACACGCTCTTCGGTACTGACTTAACCCTCCTGTTTa > 1:760395/1‑239 (MQ=255)
cGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAAAAGCCTGCGGGCTGACGGCGAAATGCTCTACCAGCCCTTCGGTCCTGCCATAACCcggcg > 1:92011/1‑232 (MQ=255)
aGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCTCTACCAGCTCTTCGGTACTGACCTAACCCTGCTGTTTAAcc > 1:371050/1‑239 (MQ=255)
ggggATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAAcc > 1:72331/1‑219 (MQ=255)
gtttGCCCCGCCACTGGGCGGGCGATGCGCTCTTTTTCTTGGGGCTGGGTGGCCTGGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGataa < 1:861926/237‑1 (MQ=255)
tttGCCCCCCCCCTTTGCGGGCGATGCGTTTTTTTTCTTCGGTCTGGGTGCCCTTGCGATCGTCCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGataata < 1:974251/239‑1 (MQ=255)
ttGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGAc > 1:222906/1‑207 (MQ=255)
ttGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATAAGGTTTTGCTCCGCCAGCTCATTGAGGTCGTGGCTAATAGCCCTAGGGCTTACGGAGGAATGCCCTACCAGCTCTTCGGGACTGCACTAACCCTCCTGTTTAACCAGTTCGataatcc > 2:322028/1‑237 (MQ=255)
ccGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAAc > 1:664325/1‑220 (MQ=255)
cGCCTCTTGGCGGGCGATGCGCTTTTTTTCTTCGGTCGGGGTGGCCTTGCGATCGTGCCAGGGCGTGTTAACCGAACTGAAAGGCGGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTtgt < 1:95009/239‑1 (MQ=255)
cttttGCGGGCGATGCGCTTTTTTTCTTCGGTCTGGGTGGCCTTGCAATCGTGCCAGGGGGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACg < 1:529999/237‑1 (MQ=255)
cGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGCGGTCGCGGCGAATAGACTGCGGGCTGACGGAGCAATGCTCTa > 1:499369/1‑172 (MQ=255)
cGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAAGGATCTACCAGCTCTTCCGTCATTACATAAACCTGCCGTTTAAACAGTTCAAAAGAACCGTTGGGCCGgtgtgt > 2:623375/1‑239 (MQ=255)
gggCGGTGCTCTCTTTTTCTCCGGTCGGGGTGGCTTGGCGATCGTGCCACGGCGTGTTACCCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTgtgt < 1:66405/238‑1 (MQ=255)
aTGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGtgtttgtt > 1:298361/1‑238 (MQ=255)
tggcttttttttCTTCGGTGTGGGTGGGCTTGGGTGGGCCACACGGGGTGTTTAACGACCTGGGGGGCCGCGCCCAGCCG‑CCATGAT‑GG‑CGCA‑GGGTCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTTCCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTc < 2:869585/232‑1 (MQ=255)
ttttcCCTCGGTTTGGGGCGCCTTGCGATGGTGCCCGGGGTTTTTAACCGAACTGGAAGGGCCCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTtata < 1:243109/239‑1 (MQ=255)
ttttCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGAc > 1:678149/1‑176 (MQ=255)
cGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGata > 1:262297/1‑197 (MQ=255)
cGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGtgtttgt > 1:78847/1‑221 (MQ=255)
cTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTAACAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCTTTTATAAATCCCTGGAATTAttttgtt > 2:600375/1‑236 (MQ=255)
gggATCGGGCCACGGGGTTTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttcgtttt < 1:385576/237‑1 (MQ=255)
cGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAAcc > 2:301103/1‑171 (MQ=255)
cGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAAcc < 1:301103/171‑1 (MQ=255)
cGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTtata > 1:1002612/1‑214 (MQ=255)
tGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAg < 1:931676/167‑1 (MQ=255)
tGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAg > 2:931676/1‑167 (MQ=255)
gcgggtttttAACCGTGCTGGAGGGCGGCGCCCCCCCG‑CCATGAG‑GG‑CGCA‑GGATCGGGTTTGGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAg < 2:177651/231‑1 (MQ=255)
aCGGCGTGTTAACCGAACTGGAAGCCAGCGCAGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGCCGGAGAAATGCTCTACCAGCCCTTCGGTACTGACATAACCCTCATGTCTAACCAAGTCGATAATACCGTTCCGCCGTTGTGTTTGTTTCATTTATCAATCCCCTGAATTATTTTCGTTTTCTCCAATTGAg > 2:6961/1‑239 (MQ=255)
gttgtTACCCGTATTGAAAGGCGCCGCCCCCCCG‑CCATGGT‑GG‑CGGA‑GGATCAGGTTTTGCCCCGCCAGCTCATTGAGGTCGCGGGTAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGa < 2:366202/236‑1 (MQ=255)
ttttAACCGAACTGGAGGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAAt < 1:361700/236‑1 (MQ=255)
ttgtacccGACCTGGAAGGCCGCCCCGCTCCG‑CCATGAT‑GG‑C‑GAGGGATCAGGTTTTGCTCCGGCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAAt < 2:578954/232‑1 (MQ=255)
tgtTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGATTc > 1:578954/1‑239 (MQ=255)
gtttAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATGTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAAt < 1:6961/236‑1 (MQ=255)
aCTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGACTAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATCCCGTTGTGACCTTGTGTTTGTTTCATTTATCAATCCCTGGAATTATTTTCGTTTTCTCGCATTTGGGGACTTAACAAAAGcc > 2:961786/1‑239 (MQ=255)
aCTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCTTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGcc > 1:520989/1‑239 (MQ=255)
ccAGCCCCACCCCG‑ACATGATGGG‑G‑CA‑GGATCAGGTTTTGCTCCGCCAGCTTATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCt < 1:961786/236‑1 (MQ=255)
cAGCGCCGCACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTaa > 1:669208/1‑238 (MQ=255)
gcccgccACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAAcc < 1:410379/233‑1 (MQ=255)
cgccgcACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATAATTTTCGTTTTCCGCCATTGAGCGATTCAACAAAAGCAATCGTTAAAccc > 1:513693/1‑239 (MQ=255)
ccgcACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTTTAAATCCCTGGAATTATTTTCGTTTTCGCGCATTTAGCGAATCAACAAAAGCCACCGCTAAACCCAc > 2:732048/1‑239 (MQ=255)
cACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCct > 2:83049/1‑117 (MQ=255)
cACCG‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTGCGGTACTGACATAACCct < 1:83049/117‑1 (MQ=255)
g‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATTCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAc < 1:386962/239‑1 (MQ=255)
g‑CCATGAT‑GG‑CGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAc < 1:600375/239‑1 (MQ=255)
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CGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCG‑CCATGAT‑GG‑C‑CA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAC > NC_000913/3560223‑3560682
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑C‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTG > NC_000913/3560212‑3560693
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TTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑GCC‑CAGGA > M01186:129:000000000‑A5M8V:1:1105:10272:18472/1‑250 (MQ=60)
GTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCCCGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCT > M01186:129:000000000‑A5M8V:1:2109:20068:6791/1‑250 (MQ=60)
GTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGGTCAGGTTTTGCT > M01186:129:000000000‑A5M8V:1:2114:16223:14065/1‑250 (MQ=60)
gtgtaggaacgtggagattgtttgggaaaatgcgcaaatggttgggttggaacggggggtgcgtacccgattccggcggggcgccaatacagaaaaacagcgttgggccagtgggaatttgccccgccaatttgcggtgtatgggcttttttcctgCGGTCTGGGTGGCCTTGCGATCGTGCCGGGGCGTGTTAACCGAGCGGGAAGGCAGGGCGGAACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTC < M01186:129:000000000‑A5M8V:1:1108:16951:4021/94‑1 (MQ=57)
tggttgtgtgtaaaatgcgaaaatttgctgtgtggcagcgtggcggccacccccgtatccggggtggtgccgatatgaagaacccgggtctcgcctttggggttttcctccgccctTTTGCGGGTGATGCCCTCTTTTTCTGCGGTCTGGGGGGCCTTGCGATCGTCCCACGGTGTGTTAACCGAAGTGGAAGGCAGCGCCGCCCCGCCATGATG‑‑G‑CTCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAT < M01186:129:000000000‑A5M8V:1:2112:5661:16972/135‑1 (MQ=60)
tttgtgggtaaaaatcggaaagtctggttgatggggcggggcggggcctgccgtttcgggggtggtgccgattccgtaaaacgGCGTCGAGCCATGGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGT < M01186:129:000000000‑A5M8V:1:2110:20785:10743/168‑1 (MQ=60)
aaaagtggttggttgggggagggggggctacgccgttcgcggggtggggcagatagcgaaaaccagggtggagccgttggggattgcctccgcccgtgTGCGGGCGATGCGCTCTTTTTCGTCGGTCTGGGTGGCCTTGCGATGGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGAACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGC < M01186:129:000000000‑A5M8V:1:2113:6207:24155/152‑1 (MQ=60)
agaacgggtttgagcatgccgtccttctgcgttgccggcggggtgcccatatgaataaactgtgctggaattgtggggttttcccCCGCCAGTTTGCGGGCGATGCCCTCTTTTGCTTCGGTTTGGGTGGCCTGGCGTTCGTGCCACGGCGTTTTATCCGAAGTGGAAGGCAGCTCCCGACCGCCATGTTG‑‑G‑CGTAGGATCAGGTTGTGCTCCGCTAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGG < M01186:129:000000000‑A5M8V:1:1113:2563:14392/164‑1 (MQ=60)
GTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCCTGCTG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGG > M01186:129:000000000‑A5M8V:1:2111:19626:18544/1‑251 (MQ=60)
TGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCCCGGCGAATAGTCTGCGGGCTGACGGA > M01186:129:000000000‑A5M8V:1:2110:23307:17575/1‑251 (MQ=60)
TGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTGCTTCGGTCTGGGCGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGCTG‑‑G‑CGCAGGATCAGGCTTTGCTCCGCCAGCTCATTAGGGCCGCGGCGAATAATCTGCGGGCTGCCGGA > M01186:129:000000000‑A5M8V:1:2112:17724:13657/1‑251 (MQ=60)
GATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCCGGTTTTGCTCCGCCAGCCCCTTTGGGGCGCGGCGAAAAGTCTGGGGGCTGACGGga > M01186:129:000000000‑A5M8V:1:1114:7356:21703/1‑249 (MQ=60)
ATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGAGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCGGGATCAGGTTTTGCTCCCCCAGCTCATTGAGGTCGCGGCGAAAAGACTGCGGGCTCACGGAGA > M01186:129:000000000‑A5M8V:1:2102:15536:18191/1‑251 (MQ=60)
ATTGAGCAGTGCGTGCGCTACCGCTTCCGCCGTGGTGCCGCTATCGATAAACAGCGCCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATTCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCCCGGCGTGTTACCCGCACTGGAAGGCAGCGCCGCACCGCCCTTATGTCG‑C‑C‑GGATCAGGTTTTGCTCCGCCCGCTCATTCAGGTCGCGGCGACTTGTCTGCTGGCTGACGGAGA > M01186:129:000000000‑A5M8V:1:2107:6192:12595/1‑251 (MQ=60)
gggggggccgtcccctttcgggggtggcgcagatgcggaaaaacgcgtgggggctctggggatttggccCCGCCACTTTGCGGGCTATGGGCTCTTTTTCTGCGGTCTGGGTGGCCTGGGGATCGTGCCACGGCGTGTTACCCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTC < M01186:129:000000000‑A5M8V:1:1113:17678:22834/181‑1 (MQ=60)
GTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGTTCAGGTTTTGCTCCGCCAGCTCATTGCGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCA > M01186:129:000000000‑A5M8V:1:1110:16017:17411/1‑251 (MQ=60)
GTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGGGGTCGCGGCGAATAGGCTGCGGGCTGACGGAGAAATGCT > M01186:129:000000000‑A5M8V:1:2111:13070:26824/1‑249 (MQ=60)
GTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCtgtctcttttacccatttccgagcccacgggacgga > M01186:129:000000000‑A5M8V:1:1101:26496:16568/1‑214 (MQ=60)
GTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGCCGGAGAAATGtc > M01186:129:000000000‑A5M8V:1:1106:27431:17593/1‑247 (MQ=60)
GTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCCCATTGAGGTCCCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCTCA > M01186:129:000000000‑A5M8V:1:1104:19643:18439/1‑251 (MQ=60)
GTGCGTGCGCTACCGCCTCCGGCGTGGTGCCGATATCGATAAACAGCGTAGAGCCATTGGGGCTTTGCTCCGCCACTTTGCGGGCGATCCGCTCTTTTTCTTCGGTCTGGGAGGCCTTGCGATCGTGCCACGGCGCGTTAACCGAACTGGAAGGCAGCGCCGCCCCGCCATGATG‑‑G‑CGCAGGATCAGGGTTTGCTCCGCCcgctacttg > M01186:129:000000000‑A5M8V:1:1103:5864:6167/1‑200 (MQ=60)
GTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCCCCTTGAGGCCCCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCTCTACC > M01186:129:000000000‑A5M8V:1:2114:22513:7876/1‑250 (MQ=60)
GCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGCTCAGGTTTTGCTCCGCCAGCTCATTGCGGTCGCGGCGAATAGTCTGCGTGCTGCCGGAGAAATGCTCTACCAG > M01186:129:000000000‑A5M8V:1:2102:6789:15261/1‑250 (MQ=60)
CTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCACTTGGGGATCTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCTGCGCCGCACGGCCATGATG‑‑G‑CGCAGGCTCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGCATAGTCTGCGGGCTGACGGtgaaaagccttacctgct > M01186:129:000000000‑A5M8V:1:1109:3098:10121/1‑231 (MQ=60)
ACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCACCTCATTGAGGTCGCGGCGACAAGTCTGCGGGTTGCCGGAGAAATGCTCTACCAGCTCTT > M01186:129:000000000‑A5M8V:1:1108:2471:18942/1‑250 (MQ=60)
CGTGGTGCCTATTTCGATAACCAGCGTCGGGCATGTGGTGTTTTGCTCCGCCATTTTGGGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACA < M01186:129:000000000‑A5M8V:1:2111:14306:14584/250‑1 (MQ=60)
GTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGCATAGTCTGCGGGCTGCCGGAGAAATGCTttacacgctcttcgcacatggcataac > M01186:129:000000000‑A5M8V:1:2109:17902:27650/1‑223 (MQ=60)
GTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTTCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAAC > M01186:129:000000000‑A5M8V:1:1102:15570:17690/1‑250 (MQ=60)
tttggttttttccaatctgaaggcggcattagtgagtggcgcgcgtccggtgggcccggagatggtgaaaagggcaggGGGTGGCCTTGCGAACGTCCCACGGGGTGTACACCGAACTGAAAGCCAGGGCCGCACCGCCAGGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGC < M01186:129:000000000‑A5M8V:1:2114:5072:16733/173‑1 (MQ=60)
ttattgaaaacgtggctcgggccttggggttgttgctccgcctgtttggggggggtgcgcttgtttgCTTCGGTCGGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAGGGCGGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTG < M01186:129:000000000‑A5M8V:1:1112:17944:3166/184‑1 (MQ=60)
tgttggttaaggaggggtgagcttgtgggggttttctcctCCACTTTGCGGGCGATGCACTTTTTTTCTTCGGTCGGGGGGGCCTTGCGGTCGTGCCGGGGCGTTTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTCTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTG < M01186:129:000000000‑A5M8V:1:1106:19808:5018/211‑1 (MQ=60)
TCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCCTTGGGGTCGCGGCGAATAGTCTGCGGGCTGACGGCGAAATGCTCTACCAGCTATTCGGACCTGACCTAACCCTGCTGTTT > M01186:129:000000000‑A5M8V:1:2104:3099:21271/1‑251 (MQ=60)
TCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAG > M01186:129:000000000‑A5M8V:1:2104:24891:11813/1‑190 (MQ=60)
GATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTGGCTCCGCCAGCGCATTGCGGTCGCGGCGAATAGTCTTCGGGCTGCAGGAGAAATGCCGTACACGCTCTTCGGTACTGACTTAACCCTCCTGTTTAA > M01186:129:000000000‑A5M8V:1:2107:28452:17710/1‑251 (MQ=60)
ATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAAAAGCCTGCGGGCTGACGGCGAAATGCTCTACCAGCCCTTCGGTCCTGCCATAACCCggcgg > M01186:129:000000000‑A5M8V:1:1103:28971:13545/1‑240 (MQ=60)
aacagcggcgcggtcgttgggggttttcccCCGCCAGTTTGCGGGCGATGCGCTTTTTTCCTGCGGTTGGGGGGCCCTTGCAATCGTGCCCCGGGGTGTTAACCGAACTGGAAGTCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACC < M01186:129:000000000‑A5M8V:1:2113:22428:4126/221‑1 (MQ=60)
aaaccggggcgcggcgttggggattttgccccgccacttggggggcaatgcctttTTTTTCTGCGGTCCGGGTGGCCTGGCGAGCGTGCCCGGGCGTTTTAACCGAACGGGAGGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACC < M01186:129:000000000‑A5M8V:1:2107:17624:7469/196‑1 (MQ=60)
aaacggggtggggccttggggtttgtgccccgccagttgGCGGGCGGTGCGCTCTTTTCCTTCGGTCTGGGTGGCCTTGGGATCGTGCCCCGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCA < M01186:129:000000000‑A5M8V:1:1104:19469:4991/212‑1 (MQ=60)
aaaagtggcgcggctgtgggggatttctcccgcccttttggcggggagggcctttttttcctcggttggggtggccctgcgtgctggccagggggttTTAACCGAACTGGAAGGCCGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCGGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTTCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCA < M01186:129:000000000‑A5M8V:1:2113:19590:6003/154‑1 (MQ=60)
AAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCTCTACCAGCTCTTCGGTACTGACCTAACCCTGCTGTTTAACCA > M01186:129:000000000‑A5M8V:1:1110:5089:20047/1‑251 (MQ=60)
GTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCC > M01186:129:000000000‑A5M8V:1:1102:20375:24222/1‑231 (MQ=60)
ccggcaaacgagatgggggtccgtccggggggctcggagatgtgtaaaagagacggggggGGCCTGGCGATCGGGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAAT < M01186:129:000000000‑A5M8V:1:1108:16445:24642/189‑1 (MQ=60)
tgaaaaagcgaccgccccgccatttgggGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC < M01186:129:000000000‑A5M8V:1:2101:10193:15664/222‑1 (MQ=60)
ataagactgaatacgagtagggggcccgcctcgggggccgggagatggttaaaagagacaGCCTTGCGATCGTGCCACGGCGTGTTAACCGACCTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC < M01186:129:000000000‑A5M8V:1:2112:15085:11405/190‑1 (MQ=60)
CCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACA > M01186:129:000000000‑A5M8V:1:1106:15308:22537/1‑219 (MQ=60)
tatggggatttggccccgccccttgggggggcgtgcgcttttttctctcggtcgggcTGGCCTCGCGATCGGGCCAGGGCGTGGTAACCGAACGGGAAGCCAGCACCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCG < M01186:129:000000000‑A5M8V:1:1104:13995:25971/194‑1 (MQ=60)
GGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACC > M01186:129:000000000‑A5M8V:1:2104:16866:25985/1‑232 (MQ=60)
GGTTTGCCCCGCCACTGGGCGGGCGATGCGCTCTTTTTCTTGGGGCTGGGTGGCCTGGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA < M01186:129:000000000‑A5M8V:1:2110:20197:13340/250‑1 (MQ=60)
ttttgccccccccCTTTGCGGGCGATGCGTTTTTTTTCTTCGGTCTGGGTGCCCTTGCGATCGTCCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACG < M01186:129:000000000‑A5M8V:1:2113:29286:15575/238‑1 (MQ=60)
GTTGCCCCGCCACTGTGCGGGCAATGCGCTTTTGTTCTTCGGTCTGGGTGGCCTTGCGATCGCGCCACGGCGTGTTACCCGACCTGGAAGCGAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACG < M01186:129:000000000‑A5M8V:1:2106:26263:16560/250‑1 (MQ=60)
ctccgccgcttgggggggtgtgcgcttttgTTCTTCGGTCTGGGGGGCCGTGCGGTCGGGCCACGGCGTGTAAACGGAACGGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCCCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTG < M01186:129:000000000‑A5M8V:1:1102:8788:8809/221‑1 (MQ=60)
CCGCCTCTTGGCGGGCGATGCGCTTTTTTTCTTCGGTCGGGGTGGCCTTGCGATCGTGCCAGGGCGTGTTAACCGAACTGAAAGGCGGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTT < M01186:129:000000000‑A5M8V:1:1103:25572:15147/251‑1 (MQ=60)
CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGCGGTCGCGGCGAATAGACTGCGGGCTGACGGAGCAATGCTCTAC > M01186:129:000000000‑A5M8V:1:1114:5969:9267/1‑184 (MQ=60)
cctttggggggtggTGCGCTCTTTTTCTTCGGTCTGGGGGGCCTGGCGCTCGTGCCCAGGGGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTT < M01186:129:000000000‑A5M8V:1:2107:26163:18464/237‑1 (MQ=60)
cctTTTGCGGGCGATGCGCTTTTTTTCTTCGGTCTGGGTGGCCTTGCAATCGTGCCAGGGGGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTT < M01186:129:000000000‑A5M8V:1:2101:20761:5568/248‑1 (MQ=60)
ttgttgcaggggagtgctgtgtttattgcggtgtgggtgctctggcaatcggGCCACGGCGTGTTAACCGAGCGGGAGGGCATGGACGGACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGGTCGTCCAGCTCCTTGAGGGCGCGGCGAATAGTCTGCGGGCTGGCGGATAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTT < M01186:129:000000000‑A5M8V:1:2108:13709:28870/199‑1 (MQ=60)
catttgcgggcgattgctttttttcctgCGGTCAGGGTGCCCTTGCGATCGGGCCACGGCGGTTTAACCGAACTGGAAGGCAGCGCCCAACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTT < M01186:129:000000000‑A5M8V:1:1103:23181:22907/223‑1 (MQ=60)
CTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTT > M01186:129:000000000‑A5M8V:1:1108:22567:22625/1‑250 (MQ=60)
CGGGCGGTGCTCTCTTTTTCTCCGGTCGGGGTGGCTTGGCGATCGTGCCACGGCGTGTTACCCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTT < M01186:129:000000000‑A5M8V:1:1102:26169:20026/250‑1 (MQ=60)
CGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACA > M01186:129:000000000‑A5M8V:1:2105:13620:11905/1‑188 (MQ=60)
CTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCTCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGAACTGACATCACCCTGCTGTGTAACCAGTTCGCTAATACCGTTGTGACGTTGTGTTTGTTctttctcttatacacatt > M01186:129:000000000‑A5M8V:1:2114:5759:18329/1‑233 (MQ=60)
CTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTT > M01186:129:000000000‑A5M8V:1:1103:19432:5645/1‑233 (MQ=60)
CTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAA > M01186:129:000000000‑A5M8V:1:1107:26312:24189/1‑209 (MQ=60)
tttttccctcggtttggggcgccttgcgatggtgcccggggtttTTAACCGAACTGGAAGGGCCCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAA < M01186:129:000000000‑A5M8V:1:1107:14472:12678/207‑1 (MQ=60)
GGTCTGGATGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTACGGGCTGACGGAGAAATGCTCTCCCAGTTCTTCGGAACTGACATAACCCTGCTGTTTAACCAGTTTGTTAATACCGTTGTGACGTTGCGTTTGTTTATTTTTTAAATCCCTGGAATTATTTTCGT > M01186:129:000000000‑A5M8V:1:1101:20483:15148/1‑251 (MQ=60)
GGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAA > M01186:129:000000000‑A5M8V:1:2114:22538:11737/1‑226 (MQ=60)
TGGGATCGGGCCACGGGGTTTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAG < M01186:129:000000000‑A5M8V:1:1111:15908:6315/251‑1 (MQ=60)
GTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGATTCA > M01186:129:000000000‑A5M8V:1:2102:19662:15085/1‑251 (MQ=60)
tgtTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATGTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCC < M01186:129:000000000‑A5M8V:1:1101:14127:7944/247‑1 (MQ=60)
GTTTTAACCGAACTGGAGGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCC < M01186:129:000000000‑A5M8V:1:1110:5967:14993/250‑1 (MQ=60)
GTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCTTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCA > M01186:129:000000000‑A5M8V:1:1114:14969:21955/1‑251 (MQ=60)
GAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAA > M01186:129:000000000‑A5M8V:1:2105:23966:6009/1‑250 (MQ=60)
CTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATAATTTTCGTTTTCCGCCATTGAGCGATTCAACAAAAGCAATCGTTAAACCCA > M01186:129:000000000‑A5M8V:1:1114:19115:17379/1‑251 (MQ=60)
AGGCAGCCCCGCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTGCGGTACTGACATAACCCTGCTGTTTAACC < M01186:129:000000000‑A5M8V:1:1103:4669:8515/139‑1 (MQ=60)
cgcccgcCACCGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACC < M01186:129:000000000‑A5M8V:1:1111:27467:20703/244‑1 (MQ=60)
CGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATTCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTG < M01186:129:000000000‑A5M8V:1:1111:25805:7340/251‑1 (MQ=60)
CGCCATGATG‑‑G‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTG < M01186:129:000000000‑A5M8V:1:2103:25776:7106/251‑1 (MQ=60)
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TTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATG‑‑G‑C‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTG > NC_000913/3560212‑3560693
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |