Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F9 I0 R1
|
89 |
94.4 |
2603848 |
74.4% |
1937262 |
227.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,560,455:1 |
+G |
100% |
intergenic (‑2/+1) |
glpR ← / ← glpR |
pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,560,455 | 1 | . | G | 96.8%
| 184.0
/ ‑3.6
| 60 | intergenic (‑2/+1) | glpR/glpR | pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base G (37/20); total (39/21) |
| Fisher's exact test for biased strand distribution p-value = 5.44e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| Rejected as polymorphism: E-value score below prediction cutoff. |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
ATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGC‑C‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCC > NC_000913/3560218‑3560673
|
aTCAAGGTGTTAGCACGGTTGATATTGTTGGTGACAATGCGCAATTTGCTGTGATGGAGCATTGCGTGCGCTACCGCTTCGGGCGTGGTGCCGATATCGATAACCGGCGTCGAGCCATTGGGGATTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGcg < 1:716550/239‑2 (MQ=255)
cAACGTGTTCGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGCTATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGGCTGGTTGGCCTTGCGATCGTGCCACAGCGCGTTAACGGAAATTGAAGGAGGCGCACCACCGCCATGATGGcgca > 2:10067/1‑236 (MQ=255)
aGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCAACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGAGTTAACCGACCTGCAAGGCAGCTCCGCCCCGCCTTGTTGGc‑ccaggacaaggt > 1:617561/1‑228 (MQ=255)
ttGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GAATCAGGTTTTGCt > 1:1179583/1‑238 (MQ=255)
ttgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTc > 1:17469/1‑239 (MQ=255)
ttgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGGTTTGCTCCGCCAGCTc > 1:1218866/1‑239 (MQ=255)
tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTcg > 1:288508/1‑239 (MQ=255)
cTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGGTAAACAGCGTCGAGCCATTGGTGATTTGCTCCGCCCCTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAATGCAGCGCGGCACCCCCTTAATGGC‑CAA‑GGATCAGGGTTTTCTCCCCCAGCCACATGAGGCCGGGGCGacaatt > 2:475927/1‑234 (MQ=255)
tgATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGACCAGGGTTTGCTCCGCCAGCTCATTGAGGGCGCCGAGAAAAGtggg > 2:823013/1‑236 (MQ=255)
gAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGCCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGCTTTGCTCCGCCAGGCCATTGAGGTCCCGGCGAATAGCCTGCggcc > 1:698382/1‑237 (MQ=255)
aGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGcg > 1:382664/1‑238 (MQ=255)
gcgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCCTCATGGCGC‑C‑GGAACCGGTTTTTCTCCCCCAGCCCCTTGAGGGCCCGGCGAAAAGTCTGCGGGGCGACggg > 2:9611/1‑238 (MQ=255)
cgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCCTTACGGTCGCGGCGAATAGTCTGCGGGCTGACGgag > 1:692735/1‑239 (MQ=255)
tACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTAGAGCCGTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTATTTTTCTTCGGTCTGGGCGGCCTTGCGATCGTGCCACGCCGGGTTGACCGCACTGGCAGGCCGCGTCACACCGCCATCATGGCGT‑A‑GCATCCAGTTTTGATCGCCTCGCCCATTGAGGTCCGCGCAAACAGTCTGCCGGGCGACgggggaacat > 2:1204010/1‑230 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGCTGGCGC‑A‑GGATCAGGTGTTGCTCCACCAGCACATCGAGGTCGAACAGAACAGCATGCGGCCTCACGGAaaaagggcc > 2:289514/1‑234 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCTCCAGCTCATTGAGGTCGCGGCGAAAAGGCTGCGGGCGGAGGGAGAAATGct > 2:178175/1‑238 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCAGCGAACAGGCTGCGGGATGCCGGGGAAATGcg > 2:929405/1‑237 (MQ=255)
tCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCa > 1:601369/1‑238 (MQ=255)
ccGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGCCGGAGAAATGCTCTACCAg > 1:154260/1‑238 (MQ=255)
cccattatCGATAAACAGCGTCGAGCCTTGGGGGATTGGCCCCGCCACTTGGCGGGCGATGCGCTCTTTTTCTCCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTa < 1:178175/233‑1 (MQ=255)
atatCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACGGAc > 1:402131/1‑239 (MQ=255)
gATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCCCTACCAGCCCTTCGGTACTGCCATaa > 1:538673/1‑238 (MQ=255)
actgCGTCGTGCCATTCGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGAAAGCGCCTCACCGCCATGAGGGC‑G‑ACGGATCAGGTTTTGCTCCGCCGGCTCATTGGGGTCGCGGCGAAGAGTCCGCGGGCTGCACGCGAAAGTGTCTACACGGGCTTCGGTACGAACATaaaacagc > 2:212398/4‑233 (MQ=255)
cGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtt > 1:512369/1‑239 (MQ=255)
cGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCGGtt > 1:372480/1‑239 (MQ=255)
tCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCTAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAACAGTCTGCGGGCGTACGGGGAAATGCTCTCCCCGCCCTTGGGCACTGACATAACCCGCCCGTTTa > 2:929590/1‑239 (MQ=255)
tCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAAAGGGCTCGGGGCTTGCGGGGGAATCCTACACCAGCCTTTCGGGGCTGCCACACCCCTGCTGTTTa > 2:886258/1‑239 (MQ=255)
cGAGCCTTTGGGGTTTGCCCCCGCCACTTTGCGGGCGATGCGCTTTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCAGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTa < 1:823013/238‑1 (MQ=255)
atttGGGGTTTTGCCCCGCCACTTGGCGGGCGATGCGCTCTTTTTCTGCGGTCTGGGTGGCTTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGt < 1:262897/237‑1 (MQ=255)
ttgggtttttttCTCCTCCCCTTTGGGGGCTGTGGCCTTTTTTTCTTGTGGCGGGGTGGCCTGGCACTCGTGCCAGGGGGTTTTAACCAAAGTGGAGGGCAGCCCCGCACCGCCATGATGGCGT‑A‑GGATGAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGtt < 2:538140/231‑1 (MQ=255)
gttGGGGTTTTCCCCCGCCATTTGGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCAGGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGtt < 1:759847/238‑1 (MQ=255)
ttGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGACGGCCGCGCCGCACCGCCATGTTGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGTTCGCGGCGAATAGCGTGCGGGCTGACGGAGAAATGCTTTAACAGCCCTTCGGTACTGCCTTAACCCCGCGGtttcgccatcac > 2:262897/1‑230 (MQ=255)
ttGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCTCTACCAGCTCTTCGGAACTGACATAACCCTGCTGTTTAACAAGTTc > 1:538140/1‑239 (MQ=255)
ttGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGCCATAACCCTGCTGTTTAACCAGTTc > 1:1293575/1‑239 (MQ=255)
aTTTGCCCCGCCACTTTGCGGGCGATGCGCTTTTTTCCTTCGGTCTGGGTGGCTTTGCGATCGTGCCACGGCGGGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGataa < 1:1139600/238‑1 (MQ=255)
tttGCCCCGCCCTTTTGCGGGCGATGCGCTTTTTTTCTGCGGTCTGGGTGGCTTTGCGATCGTGCCACGGCGTGTTAACCGAACGGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGataata < 1:164521/239‑1 (MQ=255)
gccccGCCCTTTTGGGGGCGATGCGCTCTTTTTCCTCGGTCTGGGTGGCCTTGCGATCGGGCCCCGGGGTGTTACCCGAACGGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCg < 1:252667/236‑1 (MQ=255)
gCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGCAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGACGCGGCGACTAGTCTGCGGGCTGACGGCGAAATGCTCTACCAACTATTCGGTACTGACATAAACCTTCTGTTTAACCAGTTAGATAATAACg > 2:244871/1‑239 (MQ=255)
cTCCGCCACTTTGCGGGCCAGGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTGTCTCAGCCAGCTCATTGAGGGCGCAGAGAAAAGTCTCCGGGGGGACGGAGAAATGCTCAACCTGTCCGTAGGTATTAACTAAACCCTGCTGTTTAAAAAGTTTAATAAAACCGt > 2:263506/1‑239 (MQ=255)
cccccTTTGGGGGGGATGCGCTTTTTTTTTTGGGTTGGGGTGGCCTTGGGATCGGGCCAGGGGGTTTTAACCGAACTGGAAGGCAGGGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTtgtg < 1:9611/235‑1 (MQ=255)
ttGCGCTTTTTTGCTCGGGTTGGGGGGGCCTTGCGATCGTGCCACGGGGTGTTAACCGAACGGGAAGGCGGCGCGGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGtgtttgtt < 1:475927/237‑1 (MQ=255)
tGCGGTCTTTTTCTCGGGTCGGGTTGCCCTGGCGATCGTGCCACGGGGTGTCAACCGACTGGGAAGGCAGCGCCGGACCGGCATGATGGCTC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTc < 1:273168/239‑1 (MQ=255)
gcgcTTTTTTTCTGCGGTCTGGGTGGCATGGCGATCGGGCAACGGCGTTTTAACCAACCTGGAATGAAGCGCGCCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCAGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCa < 1:1137506/239‑1 (MQ=255)
ttttCTTGGGCTGGGGTGGCCTTGGGTGCGGGCCCGGGTGTGTTAACCGAACTGGAGGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATaa < 1:886258/239‑1 (MQ=255)
tgcggtggtggTGGCCTGGCGCTCGGCGCTGGGCGTGTTGACCGCACCGGAAGGCGCCGCGGCACCGCCATGATGGCGC‑A‑GGAGCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATccc < 2:17469/230‑1 (MQ=255)
gTCTGGGTGGCTTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAAc < 1:328899/185‑1 (MQ=255)
gTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGa > 1:299153/1‑239 (MQ=255)
ccTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGTTGACGGAGAAATGCTCTACCAGCCCTTCGGTCCGGACATAACCCTGCTGGTTAACCAGTTCAata > 2:328899/1‑185 (MQ=255)
ccTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCTCTACCCGCTCTTCGGGCCTGACTAAACCCTGCGGTTTCACCAGTTCGATAATCCCTTTTTGC‑CTCTGtgtttgt > 2:140054/1‑209 (MQ=255)
tGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGCGGTCGCGGCGAATAGTCTGCGGGCTGACGGCGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATACAACCGTTTGGG‑CGTTGTGTTTGTTTCATTTTTAAATCACCGGAATTTtttttgttt > 2:1262506/1‑239 (MQ=255)
cGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGGGTTTGTTTCATTTATAAATCCCTGGAATTAttttcgttttc > 1:903620/1‑239 (MQ=255)
gTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCCTTTTTAAATCCCTGGAATTATTTTCGTTTTCGCGCa > 1:888663/1‑239 (MQ=255)
aCGGCGTTTTACCCGAACGGGAAGGGCGCGCTGGACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAg < 1:1111124/239‑1 (MQ=255)
gtggtaaaCCGAACGGGAAGGCAGGCCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGa < 1:929590/232‑1 (MQ=255)
tgtaacccGAACGGGAAGGCAGCCCGGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAAt < 1:805159/232‑1 (MQ=255)
tgtTAACCGAACTGGAAGGCAGCGACGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGAGGCGAACAGTATGCGGGCGGCCGGAGAAATCAACTACCAGCTATTCGGGACTGACTGAACCATGCTGTTTAACCACTTCGATAAAACC‑TTTTGACCATTGCGTTGGTGTCATTTTTAAAACCATGGACTAATTTTAGTTTTCCCGCAtgaagtgatta > 2:131492/1‑229 (MQ=255)
gtttAACCGAACTGGAAGGCAGCGCCCGCCCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAAt < 1:156276/236‑1 (MQ=255)
acgggAAGGCACGCCCCCTCCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGcc < 1:405315/236‑1 (MQ=255)
aCTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGc > 1:302410/1‑224 (MQ=255)
aCTGGAAGGCAGCGCCGCACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGcc > 1:1186387/1‑239 (MQ=255)
cgccgcACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGCCATAACCCTGCTGTTTAACCAGTTCGATAATACCGATGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGTGCGAATCAACAAAATCCATCGCTAAAcac > 1:299936/1‑237 (MQ=255)
cgccgcACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAAt > 1:149337/1‑179 (MQ=255)
cgccgcACCGCCATGATGGCGC‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAAt < 2:149337/179‑1 (MQ=255)
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ATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGC‑C‑A‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA‑CGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCC > NC_000913/3560218‑3560673
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCA > NC_000913/3560217‑3560674
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cataagggtgttagcacgtTTGAGTTTGTTGGTGACAATGCGCAAATTGCGTTGATGGAGCAGGGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCTATAACCAGCGTCGGGCCTTTGGGGATTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGT < M01186:129:000000000‑A5M8V:1:1110:4471:15531/232‑1 (MQ=60)
caaaagcttgttgacaagtgtgagtttttgggggccatggcgcaatttgctgtgtttgagaggggcgtcCGCTACCGTTTCGGGGGTGGTGCCGATATCGATAACCGGCGTCGACCATTTGGGGTTTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGT < M01186:129:000000000‑A5M8V:1:2111:12261:11942/182‑1 (MQ=60)
CATCAAGGTGTTAGCACGGTTGATATTGTTGGTGACAATGCGCAATTTGCTGTGATGGAGCATTGCGTGCGCTACCGCTTCGGGCGTGGTGCCGATATCGATAACCGGCGTCGAGCCATTGGGGATTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGT < M01186:129:000000000‑A5M8V:1:2102:12325:14965/251‑1 (MQ=60)
CAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACCGGAAGTCAGGGCCGCACCGCCCTGATGGCgacggaccagggttt > M01186:129:000000000‑A5M8V:1:2107:9209:22266/1‑236 (MQ=60)
TGTTATCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGAATCAGGTTTTGCTC > M01186:129:000000000‑A5M8V:1:2112:5127:13944/1‑250 (MQ=60)
CGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCA > M01186:129:000000000‑A5M8V:1:1101:12928:12608/1‑251 (MQ=60)
CGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGGTTTGCTCCGCCAGCTCA > M01186:129:000000000‑A5M8V:1:2113:13348:10182/1‑251 (MQ=60)
tgagttgtttgggaacaatgggcaaattgtggtgatggatcggtgcgtggcctacctctcccggcggggtcgcgcTATCGATAAACGGCGTCGCGCCTTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGTTCTTTTTCT‑‑TCGGTCTGGGTGGCTTTGCGATCGCGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTG < M01186:129:000000000‑A5M8V:1:2107:16116:18380/176‑1 (MQ=60)
tttttgggggaaaaggcgaaagttgctggaatgagggggtggtggcgatccgatttcgggggggtggccgatacggataacaggcgcgggcccttgGGGGATTTGCCCCGCCATTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGGGTGTTACCCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG < M01186:129:000000000‑A5M8V:1:2114:24699:18878/154‑1 (MQ=60)
GTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGG > M01186:129:000000000‑A5M8V:1:1107:10484:11351/1‑251 (MQ=60)
TTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGCCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGCTTTGCTCCGCCAGGCCATTGAGGTCCCGGCGAATAGCCTGCGGccg > M01186:129:000000000‑A5M8V:1:2102:12636:5620/1‑248 (MQ=60)
TGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCGG > M01186:129:000000000‑A5M8V:1:1109:15883:11691/1‑251 (MQ=60)
ATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCCTTACGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGA > M01186:129:000000000‑A5M8V:1:2101:18433:25698/1‑251 (MQ=60)
tggacgggggggggcgtccccgtttcggggtggggccctatatgtaaaaccggcgtgggtccttgggggtttgGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA < M01186:129:000000000‑A5M8V:1:1107:19549:23029/178‑1 (MQ=60)
GAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCCCCGCACCGCCATCATGGCGCCGGACCAGGTTTTGCTCCGCCAGCTCATTGAGGTCCCGGCGAATAGTCTGCGGGCTGACGGAGAAAT > M01186:129:000000000‑A5M8V:1:2103:22439:23331/1‑251 (MQ=60)
cggtggcagcgcttcctcttggggcggggggccgtttgcaataaaacgggctgacctatggggaattttccccgccctTTTGCGGGGGATGCGCTCTTTTTCT‑‑TCGGTCTGGGGTGCCTTGCGTTGGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCAGCGAATAGTCTGCGGGCTGACGGAGAAATGC < M01186:129:000000000‑A5M8V:1:2101:20420:26674/172‑1 (MQ=60)
catgggagcgtatccgcgtcccgggctgttgccagtatgagtaaccagcgcgggacagtggggaatttcccCCGCCACTTAGCGGGCGTTGCTCTCTTTTTCA‑‑GCGGTCGGGGTGGCCTTGCGTGCGTGCCACGGTGTGTTAACCGACCTGCAGGGCAGCGCCGCCCCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGC < M01186:129:000000000‑A5M8V:1:2114:28288:13368/179‑1 (MQ=60)
cgtgcgtgaccgcttccgggtgtggcccatgttcaATAAACAGGGTCGAGCTATGGGGGATTTGCCCCGCCATTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTAC < M01186:129:000000000‑A5M8V:1:1106:20854:4401/215‑1 (MQ=60)
gggggctcccggtgcgggggggggccaaatatcgaaaaacagcgtggaccttggggggtTTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACC < M01186:129:000000000‑A5M8V:1:1103:21900:10211/191‑1 (MQ=60)
GCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAG > M01186:129:000000000‑A5M8V:1:1113:18211:25590/1‑250 (MQ=60)
CGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGCCGGAGAAATGCTCTACCAGC > M01186:129:000000000‑A5M8V:1:1104:25040:13589/1‑250 (MQ=60)
gctgccgtttcgggcggggtgccgatacagaaaaacagcggcgggctagTGGGGTTTTGCCCCGCCACTTGGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCGGGGGGGCCTTGCGATCGTGCCACGGGGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCT < M01186:129:000000000‑A5M8V:1:2112:18066:8084/201‑1 (MQ=60)
ttaccgtttcggggggggggccgttttcgaaaaacagcgtcgggcactgggggtTTTGCTCCGCCATTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTACCCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCT < M01186:129:000000000‑A5M8V:1:1105:13360:14971/197‑1 (MQ=60)
ccgcctcccgtggggggctcatttcgaaaaaacgggtgaggcccttgggggttttcgcCCGCCATTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGGGGCTTGGCGATCGGGCCACGGGGTGTTACCCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTC < M01186:129:000000000‑A5M8V:1:1109:9087:8817/193‑1 (MQ=60)
TTCCGGGGTGGTGCCGTTGTCGATAAACGGCGTCGGGCCTTGGGGGATTTGCCCCGCCACTTGGCGGGCGATGCGCTTTTTTTCT‑‑TCGGTCTGGGTGGCCTGGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTAC < M01186:129:000000000‑A5M8V:1:2109:17582:23085/251‑1 (MQ=60)
GCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACGGACA > M01186:129:000000000‑A5M8V:1:1109:13709:20423/1‑251 (MQ=60)
tgtggggcgGATATCGATAAACAGCGCCGAGCATTTGGGGTTTTCCTCCGCCCTTTTGCGGGCGTGGCGCTTTTTTTCT‑‑TGGGTCTGGGGGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAGGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACA < M01186:129:000000000‑A5M8V:1:2103:12651:17951/241‑1 (MQ=60)
cggtgtgcattagcggataaacaggtttggccttgtggtgtttgcccccgcatctttaggggcggtgggaTCTTTTCCT‑‑TCGGTCGGGGTGGCTTTGCGAGCGTGCCACGGCGTGTTAACCGAACTGGATGCCAGCGCGGCTCCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACA < M01186:129:000000000‑A5M8V:1:2110:16896:1649/180‑1 (MQ=60)
GTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCCCTACCAGCCCTTCGGTACTGCCATAAC > M01186:129:000000000‑A5M8V:1:1112:23618:17128/1‑250 (MQ=60)
ttagaagacccaaaacctgccgtgagccctggggattttccgCCGCCACTTTGCGGGCTATGCGCTTCTTTTCT‑‑CCGGTTGGGGTGGCCTTGCGATCGTGCCACGGCGTGTTACCCGACCTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCC < M01186:129:000000000‑A5M8V:1:1104:2363:15512/209‑1 (MQ=60)
tcccatTATCGATAAACAGCGTCGAGCCTTGGGGGATTGGCCCCGCCACTTGGCGGGCGATGCGCTCTTTTTCT‑‑CCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACC < M01186:129:000000000‑A5M8V:1:1104:15664:25868/244‑1 (MQ=60)
gaccagtgaaaaaccagcctcgagcatttggggatttcccccgccatttgggGGGCGTTGCGCTTTTTTTCT‑‑TCGGTCGGGGGGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCCCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCAGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCC < M01186:129:000000000‑A5M8V:1:2110:16268:27287/197‑1 (MQ=60)
gccgtttcgaataaacacggtggggctattggggtttttcccccccattttgggggcgttgcgctcttttctttcgtttgGGGTGGCTTTGCGATCGGGCCACGGGGTGTTACCCGACCTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCC < M01186:129:000000000‑A5M8V:1:2103:16658:16795/170‑1 (MQ=60)
tcgtcgccacgtgttggaacagatattttgagatgagtgtttgttgtttttataaagcaaaagacggcacacgagatttctgcctgtctcgtgggctcggatatggatataagagacagGGAAGGCATCGCCGCACCGCCATGATGGCGCAGTATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCC < M01186:129:000000000‑A5M8V:1:2111:8492:5248/130‑1 (MQ=60)
TCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTA > M01186:129:000000000‑A5M8V:1:1112:8167:3569/1‑251 (MQ=60)
TCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCGGTTT > M01186:129:000000000‑A5M8V:1:1109:25191:6454/1‑251 (MQ=60)
aatacgggtctgcGCCATTGGGGTTTTGCTCCTCCTTTTTGCGGGCTATGCGCTCTTTTCCT‑‑TCGGTCTGGGGGGCCTTGCGTTCGTGCCAGGGGGTGTTAACCGAACTGGAAGGCCGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACC < M01186:129:000000000‑A5M8V:1:2101:8981:22969/238‑1 (MQ=60)
gtgttgcggcaggtcgcgtggtctcggagatgtgtagaaggagcagaggcgctgtttttcttcgctgggggtgcccttcggatcgtgcaccggggtgataccctAACTGGAAGGCCGCGCCGACCCGCCATGATGGCGCAGGATCAGGTTTTGCGCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACC < M01186:129:000000000‑A5M8V:1:2108:7537:25426/146‑1 (MQ=60)
GCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCTCTACCAGCTCTTCGGAACTGACATAACCCTGCTGTTTAACAAGTTCA > M01186:129:000000000‑A5M8V:1:1112:13458:16874/1‑251 (MQ=60)
GCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGCCATAACCCTGCTGTTTAACCAGTTCG > M01186:129:000000000‑A5M8V:1:2114:11403:22469/1‑251 (MQ=60)
TCGAGCCTTTGGGGTTTGCCCCCGCCACTTTGCGGGCGATGCGCTTTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCAGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGAT < M01186:129:000000000‑A5M8V:1:2104:24054:24697/250‑1 (MQ=60)
cgtcagTTGGGGATTGCCTCCCCCACTTTGCGGGCGATGGGTTTTTTTTCT‑‑TGGGCCTGGGTGGCATGGCGACCGTGCCACGGGGTGTTAACCGAACTGGAAGGCAGCCCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAA < M01186:129:000000000‑A5M8V:1:2110:19377:25376/244‑1 (MQ=60)
cgccatttggggtttgcccccccccgtttggggacagttgccttTTTTTCC‑‑TCGGTCTGGGTGGCCTTGCCATCGTGCCCCGGCTTGTTAACCGAACTGGAAGTCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTTATTGAGGTCGCAGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATATCCCTGCTGTTTAACCAGTTCGATAA < M01186:129:000000000‑A5M8V:1:1102:26770:15719/206‑1 (MQ=60)
caccttgggggttggcccccgcccttttggGGGCGAGGCGTTCTTTTTCT‑‑TCGGTCGGGGTGGCCTTGCGATGGGGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAAT < M01186:129:000000000‑A5M8V:1:2109:19688:15122/220‑1 (MQ=60)
ggcgcttggggttgtggcgccgctacttggcggtggatgcgttctttttctgggtgCTGGGTGGCATTGGGATCGGGCCACGGCGTGTTAACGGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAA < M01186:129:000000000‑A5M8V:1:2112:5434:11464/194‑1 (MQ=60)
catTTGGGGTTTTGCCCCGCCACTTGGCGGGCGATGCGCTCTTTTTCT‑‑GCGGTCTGGGTGGCTTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACC < M01186:129:000000000‑A5M8V:1:1106:26015:20605/248‑1 (MQ=60)
cgttggggttttcccccgccatttgGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCAGGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCG < M01186:129:000000000‑A5M8V:1:2103:8271:15008/226‑1 (MQ=60)
ttgttttttttttttaaagcagaagccggcatacgagttttccgccgggccggggggctgggagatgggtataagaggcagtgtTTAACCGACCTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC < M01186:129:000000000‑A5M8V:1:1104:16492:6092/166‑1 (MQ=60)
ttttggccccggctttttgggggcgtcgcacttTTTTTCT‑‑TCGGTCGGGGTGGCCTGGCGATCGTCCCACAGCTTGTTAACGGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA < M01186:129:000000000‑A5M8V:1:1101:12569:9095/217‑1 (MQ=60)
GATTTGCCCCGCCACTTTGCGGGCGATGCGCTTTTTTCCT‑‑TCGGTCTGGGTGGCTTTGCGATCGTGCCACGGCGGGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGA < M01186:129:000000000‑A5M8V:1:2111:14549:17564/250‑1 (MQ=60)
ttttgccccgccctTTTGCGGGCGATGCGCTTTTTTTCT‑‑GCGGTCTGGGTGGCTTTGCGATCGTGCCACGGCGTGTTAACCGAACGGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACG < M01186:129:000000000‑A5M8V:1:1104:15778:18294/237‑1 (MQ=60)
TGCCCCGCCCTTTTGGGGGCGATGCGCTCTTTTTCC‑‑TCGGTCTGGGTGGCCTTGCGATCGGGCCCCGGGGTGTTACCCGAACGGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTG < M01186:129:000000000‑A5M8V:1:1106:11854:15867/251‑1 (MQ=60)
cccccctttgggggggatgcgcttttttttttgggttgGGGTGGCCTTGGGATCGGGCCAGGGGGTTTTAACCGAACTGGAAGGCAGGGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTT < M01186:129:000000000‑A5M8V:1:1101:13800:8876/213‑1 (MQ=60)
tatgttgggcgtgagcgtcttttttgccttgttcggggtgcctttgcgatcggtccggGGCGTGTTAACCTAAGTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTT < M01186:129:000000000‑A5M8V:1:1112:18094:4793/193‑1 (MQ=60)
ccgttggcggggctggccctttttttcttggggcgGGGTGGCCTTGCGGTCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCAGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTT < M01186:129:000000000‑A5M8V:1:2107:15616:9011/216‑1 (MQ=60)
gggggtgcggagatggtaaaaaggggcagggttgGGGTGGCCTTGCGATGGTGCCAGGGCGTTTTACCCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTT < M01186:129:000000000‑A5M8V:1:1104:24926:6669/216‑1 (MQ=60)
tcggggggatggctttTTTTTCT‑‑CCGGTCGGGGTGGCCTGGCGATCGTGCCCGGGCGTGTTAACCAACCTGGAAGGCAGCGCCCCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATT < M01186:129:000000000‑A5M8V:1:1103:13040:19189/235‑1 (MQ=60)
tggcggggcttgccctctgtttcctcggtctgggtggtcttgcgtggcTGCCAGGGCGTGTTAACCGACTTGGACGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTCGCTCCGCCAGCTCATGGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTCCGATAATACCGTTGTGACGTTGTGTTTGTTTCAT < M01186:129:000000000‑A5M8V:1:1107:19493:26331/203‑1 (MQ=60)
gttgcgcttttttgctcgggttgggggGGCCTTGCGATCGTGCCACGGGGTGTTAACCGAACGGGAAGGCGGCGCGGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAA < M01186:129:000000000‑A5M8V:1:1111:14438:10343/223‑1 (MQ=60)
TGCGCTTTTTTTCT‑‑GCGGTCTGGGTGGCATGGCGATCGGGCAACGGCGTTTTAACCAACCTGGAATGAAGCGCGCCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCAGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCC < M01186:129:000000000‑A5M8V:1:2111:5122:16611/251‑1 (MQ=60)
ttgcggtctttttctcgggtcgggttgccctgGCGATCGTGCCACGGGGTGTCAACCGACTGGGAAGGCAGCGCCGGACCGGCATGATGGCTCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATC < M01186:129:000000000‑A5M8V:1:1106:19348:27162/219‑1 (MQ=60)
tccgctgttttttgccggtctgtggggccgttctgtgttgccgagggttgtaacacagagtgaaaggcgcgGCCGCACCGGCATGCTGGCGCAGGATCAGGTTTTGCGCCGGCAGCTCATTGAGGTCTCAGCGAATAGTCTGCGGGCTGACGGATAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAACTCC < M01186:129:000000000‑A5M8V:1:2111:5105:16599/180‑1 (MQ=60)
GTCTTTTTCTGCTCGGTCTGGGTGGCCTTGCGTTCGTGCCCGGGGGTGTTAACCGAAGGGGAGGGCAGACCCGCACCGCCATGAGGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCC < M01186:129:000000000‑A5M8V:1:1103:20468:11739/250‑1 (MQ=60)
CTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAA > M01186:129:000000000‑A5M8V:1:1107:21118:16160/1‑251 (MQ=60)
tttttcttgggctggggtggccttgggtgcgggcccgggtGTGTTAACCGAACTGGAGGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAAT < M01186:129:000000000‑A5M8V:1:2106:18661:10453/211‑1 (MQ=60)
GGTCTGGGTGGCTTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAA < M01186:129:000000000‑A5M8V:1:1108:20835:8672/197‑1 (MQ=60)
GGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGGGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCG > M01186:129:000000000‑A5M8V:1:2106:18791:18277/1‑251 (MQ=60)
GCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCCTTTTTAAATCCCTGGAATTATTTTCGTTTTCGCGCAT > M01186:129:000000000‑A5M8V:1:2106:14122:11571/1‑251 (MQ=60)
ATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGAACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTAATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTCCTGACATAACCCTGCTGTTTAACCAGTTCGATACTACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATCATTTTCGTTTTAGCACATTGAGCGAA > M01186:129:000000000‑A5M8V:1:1112:6447:22923/1‑251 (MQ=60)
CACGGCGTTTTACCCGAACGGGAAGGGCGCGCTGGACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAA < M01186:129:000000000‑A5M8V:1:2111:11878:3097/251‑1 (MQ=60)
ggtggtaAACCGAACGGGAAGGCAGGCCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAG < M01186:129:000000000‑A5M8V:1:2107:14191:9108/243‑1 (MQ=60)
tgtTTAACCGAACTGGAAGGCAGCGCCCGCCCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCC < M01186:129:000000000‑A5M8V:1:1104:18577:14524/247‑1 (MQ=60)
GTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCA > M01186:129:000000000‑A5M8V:1:2112:6384:16832/1‑251 (MQ=60)
GTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCG > M01186:129:000000000‑A5M8V:1:1107:20174:17617/1‑236 (MQ=60)
GTGTAACCCGAACGGGAAGGCAGCCCGGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCC < M01186:129:000000000‑A5M8V:1:2104:15168:15718/250‑1 (MQ=60)
aacgggaaggcacgccccctCCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACC < M01186:129:000000000‑A5M8V:1:1109:20800:21983/231‑1 (MQ=60)
CTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGCCATAACCCTGCTGTTTAACCAGTTCGATAATACCGATGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGTGCGAATCAACAAAATCCATCGCTAAACACA > M01186:129:000000000‑A5M8V:1:1107:3003:16509/1‑251 (MQ=60)
CTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTA > M01186:129:000000000‑A5M8V:1:1104:23256:11338/1‑201 (MQ=60)
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CATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCT‑‑TCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCA > NC_000913/3560217‑3560674
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
