Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F13 I0 R1 150 9496.0 7621532 98.4% 7499587 136.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NZ_CP022686 1,547,110 G→C 19.4% intergenic (+22/‑12) CIW80_RS07710 → / → CIW80_RS07715 tRNA‑Met/tRNA‑Met

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0226861,547,1100GC19.4% 84.7 / 3.9 58intergenic (+22/‑12)CIW80_RS07710/CIW80_RS07715tRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base G (31/13);  new base C (8/4);  total (39/19)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTTATTAGAATGCTGACAAACCGCAAAGCTGCTATT  >  NZ_CP022686/1546971‑1547235
                                                                                                                                           |                                                                                                                             
cGCAATCAATTATAATTTTATGAAGTTACTCAGTACGGGGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAg                                                                                                                               <  5:521474/140‑1 (MQ=17)
cGCAACCAATTATATTTTGATGAAGTATTGCCTTACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAg                                                                                                                               <  2:289446/140‑1 (MQ=17)
cGCAACCAATTATAATTTTATTAAGTTAAGCAGTACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAg                                                                                                                               <  4:58529/140‑1 (MQ=255)
     cgaaTAAAAATTTGATGTAGTAAAGCATGACCGTGACGCGGGTTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTa                                                                                                                          <  8:413349/138‑1 (MQ=17)
        aTTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCCGTTCAACTCCGGCCCCCGCAACCAATCAAAAAAAGAAGAAAAAAAGCTGTACgc                                                                                                                       >  4:375930/1‑139 (MQ=14)
         ttAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATATAAAATTATGGAGAAAAAGCAGAACGGt                                                                                                                      >  8:89471/1‑140 (MQ=11)
             attttGATGAAGTAACTCATTACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGAcg                                                                                                                  <  5:122793/138‑1 (MQ=255)
             actttcttgaATTAAATCAGTACTGTGACGCGGGGTGGAGCAGCATGTTAGCTCGTCGGGCTAATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACGAATCAAAATTTGATGAAATAAAGCAGTACGGTGAcg                                                                                                                  <  6:807004/133‑1 (MQ=14)
                 tgatgaAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACAAAAAAAATTTAAAGGAAACAAACCAGAAAGGTGaaactgg                                                                                                              >  4:174269/1‑134 (MQ=11)
                       aGTAAAGCATTACGCGGACGAGGGGTGGTGCAGCCTGGTAGCTCGTCTGTCTCAAAACGCGAAGGTCGGCGGTGCAAATCCGGCCCCCTCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGag                                                                                                        <  7:879779/140‑1 (MQ=11)
                       aGTAAACCAGTCCGGTGACGCGGTGTGGAGCAGCCTTGTAGCGCGTCGGGCTCATAACCCGAAGGTCGTCTGTTCAAATCCGGCCCCCGCAACCAATAAAAATTAGATGAAATAAAGCAGTACGGTGACGCGGGGTGGag                                                                                                        <  6:910246/140‑1 (MQ=11)
                         actcgCAGGACGGTGACGAGCTGCGGAGCAGAATGGTCGCTCGGCGGGCTAATAACCCGAAGTGCGTCGGGTGTAATCCGGCCCCCGCCATCAATCAAAAATTGCTGAACTAAATCAGTCCGGTGACGCGGGGTGGagca                                                                                                      <  8:450524/136‑1 (MQ=9)
                              cattACGGTGACGCGGGGGGGAGCAGCATGGTAGCTCGGCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTg                                                                                                 <  3:303866/137‑1 (MQ=255)
                                 tACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCACCCAATCAAAATTAGATGAAAGAAAGCAGAACGCTGACGGGGGGTGGAGCAGCCTGGTa                                                                                              >  3:361906/1‑140 (MQ=14)
                                 tACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAATATTTGATGAAATAAAGCAGTACGGTGCCGCGGGGTGGCGCAGCATGGtt                                                                                              >  3:271219/1‑139 (MQ=255)
                                 tACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAATTTGATGATAAAAAGCAGAACGGTGCCGCGGGGTGGAGCTGCATGGtt                                                                                              >  1:536193/1‑139 (MQ=11)
                                 tACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAATTTGATCATAAAAACCAGTACGCTGCCTCTGGGTGGAGCAGCCTGGtt                                                                                              >  7:618974/1‑139 (MQ=14)
                                 tACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTGCAAATCCGGCCCCCGCAGCCAATATATATTTGTTGAAAAAAAGCAGTACGGTGCCGCGGGGTGGAGCAGGCTGGtt                                                                                              >  2:413053/1‑139 (MQ=14)
                                 tACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTAGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAATTTGATGATATAAAGCAGTACGGTGAAACTGGCTGGCGCAGACTGGtt                                                                                              >  6:281193/1‑139 (MQ=14)
                                  ccccggccgcgGGGTTGAGCAGCATGCTAGCGCGTCGTCCGCATAAACCCAAGGTAGGCTCGTCACATGCGGCACACGCAACCAATAAAAATTCCATGTAATTAACCCTTCCTGGGACGCGGGGTGGAGCAGCCTGGTAg                                                                                             <  8:631087/133‑1 (MQ=255)
                                      tGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGAATATTTTATGTAAGAAAGCAGTACGGTGACGAGGGGTTGAGCTGCATGGTATCtag                                                                                         >  7:5796/1‑138 (MQ=11)
                                      tGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAATTTGAGGATAAAAACCAGTACGGTGACGCGGGGTGGCGGAGCGTGGTTGCtat                                                                                         >  2:114615/1‑138 (MQ=11)
                                           cgGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAATATTTTAGGAAAAAAACCAGTACGGTGCCGCGGGGTGGAGCAGACTGGTTGCtggggggg                                                                                    >  4:139710/1‑133 (MQ=14)
                                           cgGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCACTACGGTGCCGAGGGGTGGAGCAGCCTGGTAGAtcgtcgtg                                                                                    >  5:202263/1‑138 (MQ=14)
                                           cgGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGAGGAAATAAAGCAGTACGGTGACGCTGGGTGGCGCAGCCTGGTAGCTCGGCggg                                                                                    >  3:888838/1‑140 (MQ=255)
                                               gTGGAGAAGCCTGTTAGATTGGCGCTCTCTAAACCCGAAGGTCTGAGGGGCCAATCCTGCCCCCTCAACCAATCATCTTTTGATGAAATTAAGCAGTACGCTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCa                                                                                <  6:385062/140‑1 (MQ=2)
                                               gTGGAGAACGATGGTTGCTCTGCGGGATCATAACCCGAAGGTCTTCGGGTCATAACACGCCCCAGCAACCAATCAAACTTTTATGAAATCTCTCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCa                                                                                <  2:237480/140‑1 (MQ=9)
                                                gggAGCAGCCTGGTTGCTCTGAGGGCACATAACCCGAAGGTCGGAGCTGCCAATCCGGCCCCCGCCACCAATAAAATATTCATGAAAAAAAGCCGTCCGGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCAt                                                                               <  5:687446/139‑1 (MQ=2)
                                                gggAGAAGCCTGGTCGCTCGTCGCGCTCATAACCCGCAGGCCGTCGGTGCAAATCCGGCCCCCGCAAACAATCATAATTTGATGTATTAAACCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCAt                                                                               <  4:364931/139‑1 (MQ=11)
                                                        caTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAATATGTGATGATATAAAGCAGTACGGTGCCGCGGGGTGGAGCAGCCTGGTAGATCAGCGGGCTGAAAACCCGaa                                                                       >  2:456817/1‑140 (MQ=14)
                                                        caTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGAcg                                                                                                                  <  5:92885/97‑1 (MQ=39)
                                                        caTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGAcg                                                                                                                  >  6:92885/1‑97 (MQ=39)
                                                        caTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAAATTGTTGAAATAAAGCAGTACGGTGCGGCGGGGTGGCGCAGGCTGGGTGCTCGTCGGGCGGATCACCCGaa                                                                       >  3:107759/1‑140 (MQ=14)
                                                        caTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATATAATATAGATGAAAGAAAGCAGTACGGTGCCGCTGGGTGGAGCATAATGGTAGGTAGACGTGCTCATACCCAGac                                                                       >  4:360153/1‑139 (MQ=11)
                                                          tGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTTGATGAAAAAAACCAGAACGGTGCCGCGGGGTGGGGCTGCATGGTAGATCGGCGGGCAAATAAccggtcgg                                                                     >  1:550598/1‑134 (MQ=11)
                                                             tAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCTATATTTGATGTAATAAAGCACTACGGTGCGGCGGGGTGGAGCAGACTGGTTGGTGGACGGGCAATTAACCCGAATgtcg                                                                  >  4:150182/1‑140 (MQ=11)
                                                             tAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTTGATGAAATAAAGCAGTACGGTGCCGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGgtcg                                                                  >  5:109856/1‑140 (MQ=255)
                                                              cgatcgtcgGTCTATTAACCCGTAGGTCGTCGGTTCATAACCTCCAGCCGCAACCAATAAAATATTTATGAAATAAACCATTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGgtcgt                                                                 <  7:903600/137‑1 (MQ=11)
                                                                cTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCACATCCGGCCCCCGCAACCAATCAAATTGTTATGAGAAAAACCGGAACGGTGCCGCGGGCTGGAGGAGCGTGGTAGATGGACCGGCTCATACCCCGTAGgtccgcc                                                               >  2:842702/1‑136 (MQ=2)
                                                                cTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAACTCCGGCCCCCGCAACCAATCAAAATTTGGTGAAATAAAGCAGAACGCTGACTCGGGGTGGAGCAGCCTGCTAGATCTTCGGGCAGATAACCCGGAGgtcgtgg                                                               >  5:329684/1‑138 (MQ=11)
                                                                cTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAAAAAAAAATTGATGAAAGAAAGCAGTACGGTGACGCGGGCTGGAGCAGCCTGGTAGCTAGACGGGCGGATAACCCGAAGGtcgtcg                                                               >  1:106624/1‑140 (MQ=11)
                                                                 tcgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGag                                                                                                        <  8:333869/98‑1 (MQ=37)
                                                                 tcgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGag                                                                                                        >  7:333869/1‑98 (MQ=37)
                                                                  cgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAATATTTGATGTAAAAAAGCAGTACGGTGACGCGGGGTTGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCggg                                                             >  7:347352/1‑139 (MQ=255)
                                                                  cgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAAAAAACCACTACGGTGCAGCGGGGTGGCGCAGCCTGGTAGCTAGTCGGGCTCAGAACCAGAATGTCCTCGGt                                                             >  7:479986/1‑140 (MQ=11)
                                                                     cgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAATATGTGATGAAAGAAAGCAGTAAGGGGCCGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGTATGTCGTGGGTTcc                                                          >  7:203744/1‑139 (MQ=11)
                                                                                    aaGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTAGATGAAATAAAGCAGTACGGTGACGAGGGGTTGAGCAGCCTGGTAGCTAGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGTCCCCCGcc                                           >  3:29849/1‑139 (MQ=11)
                                                                                     aGGGCGTAGGTGCCAAACCGTCCCCGGCAACCAATCAAACTTTGATCAACAAAACCAGTCCTGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTAGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCaa                                          <  3:903696/140‑1 (MQ=11)
                                                                                      ggTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGACTCGGGGTGGAGCAGCCTGGTAGATCGTCGGGCTCATAACCCTAAGGTCGTCGGTTCAAATACGGCCCACGCaaa                                         >  5:878887/1‑139 (MQ=11)
                                                                                          gtcgGTTCAAATCCGGCCCCCGCACCCAATCAAAAATTTATGAAAAAAACCTCTACGGTGAAGAGGGGTGGAGCAGCATGGTAGCTCGGCCGGCTCATCCCCGGTCGGTCGTCGCTTCAAAACAGGCCACAGCAAGCAAt                                     >  2:574227/1‑140 (MQ=2)
                                                                                           tcgGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGc                                                                                   <  3:359753/93‑1 (MQ=40)
                                                                                                  aaaTCCGGCCCCCGCAACCAATCAAAATTTTATGATATAAAGCAGTACGGTGACGCTGGGTGGAGCAGCCTGCTAGCTCGTGCGGCTCATAACCCGACGGTCGTCGGTTCAACTCCGGCCAACGCAACCAATTAATTAGa                             >  6:719166/1‑140 (MQ=14)
                                                                                                         gCCCCCGCAACCAATCTAAATTTGATGAAAAAAAGCAGTACGGTGACGCTGGGTGGAGCAGACTGGTAGCTCTTCGGGCTCATCACCAGAAGGTCGTCGGTTCAAATCCGGCCACCGCATCAAATTGAATAGATTGCTGa                      >  8:291359/1‑140 (MQ=14)
                                                                                                         gCCCCCGCAACCAATCAAAATTTGATGTAAAAAAGCCGTACGCTGCCGCGGGGTGGAGCAGCATGGTAGCTCAGCGGGCTCAAAACCCGAAGGTCTTCGGTTCAAATCAGGCCACCGCAACAAATTTATTAGAAttcata                      >  1:245509/1‑135 (MQ=14)
                                                                                                         gCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCAGAACCAGAAGGTCGTCGGTTCAAATCCGGCCCCAGCAAACAATTTAATAGAAAGCTGa                      >  7:241249/1‑140 (MQ=14)
                                                                                                         gCCCCCGCAACCAATCAAAATTAGATGATATAAAGCAGTACGGTGACGCGGGGTGGCGCAGCATGGTAGATAGACGGGCTCATAACCAGAAGGTCGTCGGTTCGAATCAGGCCACCGCAACCAATTAATTAGATtgatga                      >  1:783277/1‑140 (MQ=11)
                                                                                                                  aCCAAACAAAATTGTTTGAAATTAAGGATTACGGTGTCGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGTAGGTCGTCGGTTCATATCCGGCCCCCGCAACCAATTTATTAGAATGCTGACAAACCGCa             <  1:938795/140‑1 (MQ=18)
                                                                                                                     aaTCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTTATTAGAATGCTGACAAACCGCAAAg          <  7:89471/140‑1 (MQ=255)
                                                                                                                      aTCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCAAAACCCGAAGGTCGTCGGTTCAAAGCCGGCCCCCGCAACCAATTTATTAGAATGCTGACAAACCGCAAAgc         >  6:867550/1‑140 (MQ=255)
                                                                                                                       tCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTTATTAGAATGCTGACAAACCGCAAAgca        >  4:722753/1‑139 (MQ=255)
                                                                                                                             tttGATGAAATAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTTATTAGAATGCTGACAAACCGCAAAGCTGCTAtt  >  3:476480/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                             
CGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTTGATGAAATAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTTATTAGAATGCTGACAAACCGCAAAGCTGCTATT  >  NZ_CP022686/1546971‑1547235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A