Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I0 R1
|
230 |
5035.0 |
9125430 |
98.4% |
8979423 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,049,089 |
T→G |
11.9% |
N256T (AAC→ACC) |
deaD ← |
ATP‑dependent RNA helicase DeaD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,049,089 | 0 | T | G | 11.9%
| 370.0
/ 16.8
| 184 | N256T (AAC→ACC) | deaD | ATP‑dependent RNA helicase DeaD |
| Reads supporting (aligned to +/- strand): ref base T (15/143); new base G (23/2); total (38/146) |
| Fisher's exact test for biased strand distribution p-value = 3.87e-17 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 187 total aligned reads displayed.
GTCGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAA > NZ_CP022686/2048951‑2049227
|
gtcgCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGtg > 5:446216/1‑139 (MQ=255)
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTa < 6:451565/140‑1 (MQ=255)
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTa < 3:881076/140‑1 (MQ=255)
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTa < 2:419336/140‑1 (MQ=255)
gATGGCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTacg < 7:770410/138‑1 (MQ=255)
acgacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTTGTTCGAAAGAAGCTaa > 5:662293/1‑140 (MQ=255)
cgacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGTTCGAAAGAAtata > 8:39101/1‑138 (MQ=255)
cgacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTTTTTCGAGCGAAGAttaa > 3:581716/1‑137 (MQ=255)
ccATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATcgc < 3:749911/140‑1 (MQ=255)
ccATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTGCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATc < 7:1049725/138‑1 (MQ=255)
tCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTAGCAAGAATATAATagcccc > 1:428202/1‑138 (MQ=255)
acTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGGGAGAACGAAaataataacc > 7:792241/2‑134 (MQ=255)
cAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTTGTTCGGACGCAGATAATagccgccggaa > 5:756941/1‑135 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCCCCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGGTCGCACGAAGGTAATGGCCGCCTCaacaacgg > 6:203359/1‑134 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTTGTTCGGAAGAAGATAAACGCCGCGACAAAATCtt > 6:953050/1‑140 (MQ=255)
gccAGTGTCTGCTCACGCAGCGCCTGTTTCAGGGCACCGATCAGCGCTGCGCTGTTGTATCCGTTCCGCTCCAGAGCTGCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACTAAGATAATCGCCGCATCAAAATCt < 8:64782/137‑1 (MQ=255)
cTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 2:694782/140‑1 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCAGCAAAATCTTCCGCTTCCAgg < 5:912596/140‑1 (MQ=255)
cTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGTTCCAACGAAGATAAATGGCGGATCAAAATATAACGCGTCCAggg > 1:861539/1‑139 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑aaa < 5:906047/140‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑a < 7:742637/138‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑a < 8:1035240/138‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTGCAGCGCGGCGCTGTTGTAGCCGTTACGCTCTATAGCTTCTCCCACTTCCAGAGTCGAGTTTTTGGTACGAACGAAGATAATCGCCGCAGCAAAATCTTCCGCTTCCAGG‑aaa < 5:410022/140‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGGCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCATCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑aaa < 3:612471/140‑1 (MQ=255)
cACGCAGCGCCTGGTGCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑aaa < 3:740399/140‑1 (MQ=255)
cAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGGTAGAACGGAGATAAAAGCCGCATCAAAATCTTACGCCTCCAAG‑aaaacta > 4:527921/1‑136 (MQ=255)
cAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGGACGGACGAAGATAATAGCCCCATCAAAATCTTACGCGTACAGG‑CAAcc > 8:69105/1‑137 (MQ=255)
cgcCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCa < 2:559129/140‑1 (MQ=255)
gcCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTGTTTGTAGCCACAAAAATAATACCCCCATAAAAATACTCCGCATCCAAG‑TCACGGACCaa > 6:857786/1‑139 (MQ=255)
gcCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTTGTTAGCAAGTAGATAATATCCGGCTCAAAATATTGCGCTTGATGG‑GAACGTAGCac > 2:146840/1‑139 (MQ=255)
ggTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCTTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTg < 7:724728/138‑1 (MQ=255)
ggTTCATGGCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCt < 4:457547/140‑1 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGc < 7:220640/138‑1 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTGGAACGAAGAAAATAGCCGCCTCAAAATCTTACGCCTCCAGG‑AAACCTAACAAGGCGTAGtttt > 3:235894/1‑140 (MQ=255)
tCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGttttt < 3:468800/140‑1 (MQ=255)
cggtCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGACACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCATG‑AAACGTACCAGTGCTTCGTTTTTAc < 7:451145/135‑1 (MQ=255)
cGTTCAGCTCGGCGCTGTTGTAGCAGTTACGCGCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCTCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 3:1020263/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTCGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 8:167011/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGTTAGAAAGAATATAATCGCCGCATCAAAATATTACGCTTCCCGG‑AAACGTACCAGTGCGTCGTTTTTACGc > 4:729285/1‑140 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGTACGAACGAAGCTAAACGCCGCCTCCAAAACTTCAGCATCCAGG‑AACCGTACCACGGCGTCGGTTTTACGc > 6:554137/1‑140 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 6:1018135/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 4:585178/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:1171387/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 3:777370/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 1:661458/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 1:77198/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 5:57386/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 1:838425/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:815845/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 1:939630/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:1040284/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:347792/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:215700/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTGCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCAGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 8:513203/138‑1 (MQ=255)
cGTGCATCGCGGCGCTGTTGTAGCCGTTACTCTCAAGAGCTTCTGCCACTTACAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 8:886508/138‑1 (MQ=255)
cGTGCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 6:163370/140‑1 (MQ=255)
cGTGCAGCGCGGCGCTGTTGTAGCCGGTACGCTCACGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 8:546424/138‑1 (MQ=255)
gcAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATa < 4:352411/139‑1 (MQ=255)
gcggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 1:22554/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCTCTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:877612/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCTTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 3:426380/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCTCCTCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:113521/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:404510/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 8:239411/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 8:41291/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:1160229/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:1099485/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:605456/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 3:1149151/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 2:938113/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGAATCAAAATCTTCCGCTTCCAGG‑AAACGTTCCAGTGCTTCGTTTTTACGCTTACCCCa < 7:376653/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCGGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGT‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:768538/140‑1 (MQ=255)
ggcgCTGTTGAAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:642390/138‑1 (MQ=255)
cgcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTCGAACGAAGATAATAGCCGCATCCAAATCTTGCGCGTCCAGG‑AAACCTACCCGTGCTTGGTTTTTAGGCCTACCCCAGAcc > 6:410470/1‑139 (MQ=255)
ttgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCa < 3:194156/140‑1 (MQ=255)
ttgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAAAGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCa < 5:306243/140‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 3:27269/140‑1 (MQ=255)
gTTACGCTCAAGAGCTTCTGCCACTTCCAGGGTCGCGGTTTTGGTACGAACGAAGATAATCGCCGCATAAAAATCTTCCGCGTCCAGG‑CAACGTACCAGTGCTTCGTTTTTAAGCATACCCCAGACAGTCCAGTAGcggt > 2:573646/1‑137 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTCGAACGAAGATAATAGCCGCCTCAAAATATTACGCGGCCCGG‑TAACGGTCCAGGGCTTAGTTTTTTGGCATACCCCAGACAGTCCAGGAGGTCTgg > 4:125433/1‑140 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTGCGAACGAAGATAATAGCCGCCTCAAAATCTTGCGCATCCAGGCAAACG‑ACCAGTGGGTCGGTTTTACGCAAACCCCAGACCGTCCCGGAGCTCggg > 2:672105/1‑140 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 1:345040/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTACGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 4:283961/140‑1 (MQ=255)
aaGAGCTTCTGCCACTTCCAGAGTAGCGTTTTTGGTACGAACGAAGATAATAGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGt < 4:10279/140‑1 (MQ=255)
agagCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTc < 2:1111699/140‑1 (MQ=255)
agagCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTc < 4:228936/140‑1 (MQ=255)
agagCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTc < 5:186317/140‑1 (MQ=255)
gCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAgg < 5:1110289/140‑1 (MQ=255)
tCTGCCACTTCCAGAGTCGCGTTTTTTGTTCGAACCAAGATAAAAGCCGCCGCAAAATAAACCCCGTCCACG‑AAACATACCAGTGCTTGGTTTTTTAGCAAACCCCAGCCCAAACAGGTGCTCTGGCGGGTGTGAGGACg > 6:709000/1‑140 (MQ=255)
cTGCCACTTCCAGAGTCGCGGTTTTTGGACGAACGCAGATAATCGCCGCATCAAAAAATTCCGCGGCCACG‑AAAACTACCACTGCTTAGGGTTTAAGCAAACCCCCCACAGTCCAGTATCTCTGGCTGAGGTCAGGACgg > 4:875030/1‑140 (MQ=255)
cagctCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 5:212021/136‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 6:662293/140‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 2:191186/140‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 2:1038150/140‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCGTCGTTTTTACGCATACCCCAGACAGGCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 3:71074/140‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGTACGAAAGAAGATACTCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 8:305876/138‑1 (MQ=255)
aCTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCCGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGt < 1:159885/140‑1 (MQ=255)
gTCGCTTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACTTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTg < 8:854892/138‑1 (MQ=255)
tCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 6:179227/140‑1 (MQ=255)
tCGCGGTTTTGGTACGAACGAAGATAATCGCCGCATCAACATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTGTTTACGCAGACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 4:783671/140‑1 (MQ=255)
gTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGaa < 6:1071209/140‑1 (MQ=255)
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GTCGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAA > NZ_CP022686/2048951‑2049227
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
