Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F36 I0 R1
|
107 |
8366.7 |
6299831 |
98.3% |
6192733 |
135.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,049,089 |
T→G |
17.4% |
N256T (AAC→ACC) |
deaD ← |
ATP‑dependent RNA helicase DeaD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,049,089 | 0 | T | G | 17.4%
| 189.0
/ 8.9
| 116 | N256T (AAC→ACC) | deaD | ATP‑dependent RNA helicase DeaD |
| Reads supporting (aligned to +/- strand): ref base T (13/80); new base G (21/2); total (34/82) |
| Fisher's exact test for biased strand distribution p-value = 2.76e-12 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 118 total aligned reads displayed.
GTCGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTG > NZ_CP022686/2048951‑2049225
|
gtcgCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑Gtg > 7:100883/1‑139 (MQ=255)
aTCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑Gtttttt > 4:367676/1‑137 (MQ=255)
aTCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTg < 4:665760/138‑1 (MQ=255)
aTCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTTGt > 6:294390/1‑140 (MQ=255)
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTa < 6:640389/140‑1 (MQ=255)
gATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTacgaa < 5:525896/140‑1 (MQ=255)
tGTCCATACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTacgaacg < 8:280395/140‑1 (MQ=255)
tGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCCTGTCCCCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGGTTTTGTtcgac > 3:371865/1‑137 (MQ=255)
tGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTacgaacg < 5:484651/140‑1 (MQ=255)
tGTCCAGACGACCATCTTTCAGGCGTTCCAGTGGCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGACGTTACGCTCAAGAGCTTCTGCCAATTCCAGAGTCGC‑GTTTTTGGTacgaacg < 6:55495/140‑1 (MQ=255)
tCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGGTAcgaacgaa > 8:676285/1‑140 (MQ=255)
cAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGGAcgaaccaa > 1:36430/1‑138 (MQ=255)
cAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGGTTTTGTCagaacgaa > 3:75650/1‑138 (MQ=255)
gacgacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTGTTTGTTCGGACGAAGATa > 6:464369/1‑140 (MQ=255)
gacgacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCACAAGAGCTTCTGCCACGTCCAGAGTCGCGGGTTTTTGT‑CGAACGAAAATa > 8:689708/1‑140 (MQ=255)
cgacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTTGTTCGAACGAAGATa > 2:311798/1‑138 (MQ=255)
ccATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATcgc < 5:42777/140‑1 (MQ=255)
cATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTTTTAAGAACCAATATAATagcc > 6:4059/1‑140 (MQ=255)
tCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTACGCACGAAGAGaaactcc > 1:169245/1‑133 (MQ=255)
aGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCTCATCAAAATCTTCCGc < 8:322210/140‑1 (MQ=255)
gtgtCTGCTCACGCTGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTTTTGTATCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCt < 6:606798/140‑1 (MQ=255)
gtCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGGTTCGGACGAAGATAATAGCCGCCTCAAAATAGTCCGcg > 2:383655/1‑137 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 1:679286/138‑1 (MQ=255)
gCTCAAGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCTCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAgg < 5:548238/140‑1 (MQ=255)
tCACGCCGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCAACTTCAAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGaa < 7:189752/140‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑TTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGa < 4:571441/138‑1 (MQ=255)
cAGCGCCTGGTTCATGTCCCCGTTCAGCGCGGCGCGGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTGTTGGGACGGTGGCAGATAATCGCCGCAGCAAAATCTTACGCGTCCCGGAACCg > 1:562373/1‑138 (MQ=255)
ccTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTTGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGCAACGTAcaa > 4:312761/1‑136 (MQ=255)
ggTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTg < 4:29966/138‑1 (MQ=255)
ggTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCGTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTg < 4:109008/138‑1 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTAAGAACCAAGATAAAAGACCCATCAAAAAATTCCGCTTACAGGAAACGAAcccatgcaa > 8:476426/1‑133 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTTAGGACGAAGATAATAGCCGCAGCAAAAAATTCCGCATCCAGGCAAAGTACCACTgg > 4:763784/1‑137 (MQ=255)
tCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGGTTCGCACGAAGATAATAGCCGCAACAAAAAATTACGCTTACAGGAAAACTACCACTGCtt > 4:351424/1‑138 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAATATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGtt < 1:400599/138‑1 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGtttt < 5:66281/140‑1 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGtt < 1:400597/138‑1 (MQ=255)
cggtCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 3:39321/135‑1 (MQ=255)
cGTTCAGCGCGGCTCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 1:798836/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 3:491628/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 3:413097/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:4059/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:452420/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:148750/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:135201/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 6:353425/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 6:388225/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTTCGGACGAACATAATAGCCGCAACAAAATCTTACCCGTCCACGAAACCAACCAGGGCGTCGttttttagc > 5:229919/1‑136 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTTCGCACGAAACTAATAGCCGCCTCAAAATCATACCCGTACAGGAAACCTACCAGGGGTTCGttttttagc > 8:675334/1‑136 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGGTACGCTCAAGAGCTTCTGCCTCTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCTCAGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 7:109978/140‑1 (MQ=255)
cGTGCAGCGCGGCGCGGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGTAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 2:695648/138‑1 (MQ=255)
ttCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTTGGAAGGAAGAAAATAAAAGGCCCATGAAAATATTCAGCTTACAGGAAAACTTCCAGTGCTTCGTTTTTACGc > 4:376607/1‑138 (MQ=255)
ttCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTTCGGACGAAGAAAATAGCCGCCACAAAAAATTACGCGTGCACGAAACCGACCCCGGCTTGGttttttagc > 2:136146/1‑134 (MQ=255)
aGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATa < 3:763785/138‑1 (MQ=255)
cggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTTCGAACGAAGATAATAGCCGCAGAAAAATAGTCCGCGTCCAGGCAACGTACCACTGCGTCGGTTTTACGCATAcccc > 4:441692/1‑138 (MQ=255)
cggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTAGGAACCAAGAAAAAAGCCGCATAAAAATAATACGCTTCCAGGAAACGTTCCACTGCTTAGTTTTTTAGCAAAcccc > 2:455100/1‑138 (MQ=255)
cggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGTTTACAACCAAAAAAATAGCCCGAACAAAATCTTCAGCGTACAGGAAAAGGTCCCATGCTTCGTTTTTTAGCATACACCaa > 6:135120/1‑139 (MQ=255)
ggctCTGTTGTAGCCGTTACGCTCACGAGCTTCTGACTCTTCCAGAGTCGC‑GTTTTTGTGACGACAGAAGATAATCGCCGCCTCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 2:780237/138‑1 (MQ=255)
ggcgCTGTTGTCGCCGGTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGCAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACTCATACCCCAGa < 8:250834/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAATAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 7:432607/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGATTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 3:325232/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 1:1969/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 2:412073/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 1:426769/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 4:575383/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 4:518213/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 1:430868/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 1:742179/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:368234/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 7:313237/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 7:648675/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 8:179013/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 8:523322/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 8:674608/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGGTTTGGTTAGAACGCAGTAAAAATCCGCATAAAAAACATACGCATGAAGGATACGTAACAGTAGGTTGTTTTTAAGAATAACCCAgc > 8:324421/1‑139 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTTGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCTCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 4:406463/138‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTGTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 1:30675/138‑1 (MQ=255)
cTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTgg > 2:281126/1‑55 (MQ=255)
cTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTgg < 1:281126/55‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 5:761402/140‑1 (MQ=255)
gacaGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTcc < 3:754509/135‑1 (MQ=255)
gtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCa < 1:405988/138‑1 (MQ=255)
ccGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGct < 6:660244/140‑1 (MQ=255)
ccGGTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAg < 2:504280/138‑1 (MQ=255)
cGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGGGTCGAACGAAAATAATAGCCGCCTCAAAATCGTACGCGTCCCGGGAACGTTACAGGGGTTGGGTTTTTGGCAGACCCCCGCCAGTGCAGGAgg > 2:936/1‑137 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTacgaacg < 5:177317/50‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCTCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTATGGCt < 7:642098/140‑1 (MQ=255)
ctgcTGACACTTCCAGAGTCGC‑GTTTTAGGAAAGACCGAATATAATCGCAGCAGCAAAATCTTCCGCTTCCAGTAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCGAGTAGCTCTGGCTGATGTCAGGa < 6:331544/137‑1 (MQ=255)
cTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAg < 1:319697/138‑1 (MQ=255)
cTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGAc < 3:324048/138‑1 (MQ=255)
ggCCACTTCCAGAGTCGC‑GGTTATGGTACGAACGAAGATAATCGCCGCATCAAAATCATCCGCTTCAAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGAct < 2:509467/137‑2 (MQ=255)
gCCACTTCCAGAGTCGC‑GTTTTTTGTACGCACCAAGAAAATAACCCCATAAAAATCATACCCGTACAGGAAACGTACCCATTAGTAGTTTTTACGCAGACCCCACACAGTCCAGTATCGCTGGCTGCGGTCAGGACgg > 2:609818/1‑138 (MQ=255)
gCCACTTCCAGAGTCGC‑GGTTTTGGTTCGAACCAAGATAATAGCCGCCTCAAAATATTCCGCGTCCAGGAAAACTAACAGTGCTTGGGTTTTTAGCCTACCCCACCCACTCCAGTAGCTCGGGCGGATGTCAGGACgg > 4:130232/1‑138 (MQ=255)
cACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 5:772146/140‑1 (MQ=255)
ccAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCTCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCa < 1:331209/138‑1 (MQ=255)
ccAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCTCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCTAGACAGTCCAGTAGCGCTGGCTGATGTCAGGACGGGTAGTCACg < 7:236097/140‑1 (MQ=255)
ccAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 5:736554/140‑1 (MQ=255)
ccAGAGTCGC‑GTTTTTGGGACGACCGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 5:474445/140‑1 (MQ=255)
tCGC‑GTTTTTGGTACGACCGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACTTACCAGTGCATCGTTTTTACGCATACCCCCGCCAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGATGGAc < 6:723933/140‑1 (MQ=255)
gcgc‑tTTGTTGGTACGCACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCATCGTTTTTACGCATACCCCAGACAGTCCCGGAGCTCTGGCTGATGACAGGACGGGTAGTCACGCTGGAc < 8:294468/139‑1 (MQ=255)
gc‑gGTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTCGACTg < 7:6149/140‑1 (MQ=255)
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GTCGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTG > NZ_CP022686/2048951‑2049225
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
