Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F36 I0 R1
|
179 |
8076.5 |
8499890 |
98.3% |
8355391 |
135.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,049,089 |
T→G |
15.0% |
N256T (AAC→ACC) |
deaD ← |
ATP‑dependent RNA helicase DeaD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,049,089 | 0 | T | G | 15.0%
| 317.7
/ 20.3
| 171 | N256T (AAC→ACC) | deaD | ATP‑dependent RNA helicase DeaD |
| Reads supporting (aligned to +/- strand): ref base T (15/127); new base G (26/3); total (41/130) |
| Fisher's exact test for biased strand distribution p-value = 4.42e-17 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 176 total aligned reads displayed.
GTCGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGA > NZ_CP022686/2048951‑2049226
|
gtcgCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGtt < 1:126546/140‑1 (MQ=255)
gtcgCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGtt > 5:443757/1‑140 (MQ=255)
gtcgCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGtt > 1:794370/1‑140 (MQ=255)
cgCAATCAGGATGTCCAGAAGACCATGTTTCAGGCGTTCCAGGTTCTGCTCACTCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTAAAGAGCTTCTGCCACTTCCAGAGTCTCGtt < 8:821524/138‑1 (MQ=255)
tCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTT‑GTAtgaacgaa > 1:689144/1‑140 (MQ=255)
tCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTT‑GTTggaaagaa > 6:168955/1‑140 (MQ=255)
tCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTT‑GTAcgaacgaa > 2:750083/1‑140 (MQ=255)
tCCAGACGACCATCCTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTG‑GTtcgaacgga > 4:918536/1‑138 (MQ=255)
cgacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTT‑GTGAGAACAAAAATa > 7:235881/1‑138 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGGTTT‑GTTCGGACGAACATTATCGCCG‑CCTCaaaaaagt > 6:802337/1‑136 (MQ=255)
tCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTc < 3:1059155/140‑1 (MQ=255)
tCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTc < 2:558471/140‑1 (MQ=255)
tCCAGTGTCTGCTCACGCAGCGCCTGGTTAATGTCACCGTTCAGAGAGGAGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTc < 1:90922/140‑1 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTTGGAAACAAGTTAATAGGCG‑CCTCCAAATATTACGCttgaagg > 5:695208/1‑135 (MQ=255)
tCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTG‑GGACGCACGAAAATAATCGCCG‑CATAAAAATCTTACGCGTACAggga > 6:499647/1‑138 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGaaa < 2:337541/140‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGaaa < 5:1002599/140‑1 (MQ=255)
cGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGCGCTTCTGCCACTTCCAGAGGCGCGGGTTTT‑GGACGGACGCAGATTATAGGCG‑CCGACAAAAATTCCGCTTGCAgggagcg > 3:434915/1‑135 (MQ=255)
cAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTG‑GTTGGAAAGAAGATAATCTCCG‑CATAAAAATCTTACGCGTGCACGaaaagga > 3:170522/1‑136 (MQ=255)
aGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGt < 7:902770/138‑1 (MQ=255)
aGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTAc < 1:309900/140‑1 (MQ=255)
aGCGCCTGGTTCATGTCACCGGTCAGCGCGGCGCTGTTGTAGCCGGTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTAc < 3:328597/140‑1 (MQ=255)
cTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTg < 6:466465/140‑1 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGc < 7:828931/138‑1 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCtt < 4:943688/140‑1 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCtt < 6:6623/140‑1 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTT‑GTa > 1:569281/1‑76 (MQ=255)
tCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGttttt < 4:751103/140‑1 (MQ=255)
cGTTCATCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 8:441529/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 7:491698/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 4:710710/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 1:152092/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:197464/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:311643/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:168955/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 6:449245/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 6:682744/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:777342/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:884478/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:582265/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:499036/140‑1 (MQ=255)
cGTTCAGAGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 8:536715/138‑1 (MQ=255)
cGTTAAGCGCGGCGCTGTTGTAGCCGTTACGCTCAATAGCTTCTGCCACTTCCAGACGCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGATTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:563045/140‑1 (MQ=255)
gTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTTCCACTTCCAGAGTCTCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACg < 7:387763/138‑1 (MQ=255)
gTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCa < 3:736681/140‑1 (MQ=255)
gTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCa < 3:673497/140‑1 (MQ=255)
ttCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCAt < 1:474311/140‑1 (MQ=255)
gcggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCGAGAGTCGCGGTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAATTCTTCCGCTTCCAGGAAACGTACGAGTGCTTCGTTTTTACGCATACCCCa < 5:88761/140‑1 (MQ=255)
gcggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 5:1001145/140‑1 (MQ=255)
gcggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 6:443757/140‑1 (MQ=255)
cggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTG‑GTTAGAACCAAGATAATCGCCG‑CAACAAAAACTTCCGGTTCCAGGAAACGTAACAGTGAGTAGTGTTTAGGCAAAaccc > 8:281927/1‑138 (MQ=255)
cggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTT‑GTACGAACGCAGATAAAAGCCC‑CAGAAAAATATTCCGCATCAAGGAAACCGAACACAGCGTGGGTTTTAAGCAGAcccccc > 6:1004631/1‑138 (MQ=255)
cggcgCTGATGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAAAGAAAAAAATCGACG‑CCACAAAAAATTCAGAGTACAGCAAACGTAACACTCCATCGTTTTTAACCAAAcccaaa > 2:712385/1‑137 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCTCTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 2:136627/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:357713/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 4:482063/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 2:1035346/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:1024579/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 4:46196/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTG‑GTTCGCACGAAGATAATAGCCG‑CATCAAAATATTGCGCGTCCAGGACACGTACCAGGGCTTGGTTTTTAAGCCAAcccccgc > 4:241662/1‑137 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTGCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 5:451001/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTACTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:243762/138‑1 (MQ=255)
cgcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTG‑GTTCGAACGCAGATAATAGCCG‑CCTCAAAATCTTACGCGTACAGGAAAACTACCACGGCTTCGTTTTTACGCATAccccccacc > 6:79317/1‑135 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAg < 4:861947/140‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAg < 5:996157/140‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAg < 3:731765/140‑1 (MQ=255)
gcTGTGGTAGCCGTTACGCTCACGAGCGTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAg < 2:440856/140‑1 (MQ=255)
ttgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCa < 2:385772/140‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 4:331738/140‑1 (MQ=255)
ggtAGCCGTTACGCTCAAGAGCTGCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 1:527709/139‑1 (MQ=255)
gCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGc < 3:768052/140‑1 (MQ=255)
ccGTTACGCTCAAGAGCTGCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGct < 2:689144/140‑1 (MQ=255)
cGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTTGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CCTCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGc > 8:664367/1‑138 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTTGGAACGAAGATTATAGCCG‑CATAAACATATTACGCGTCCAGGGAACGAAGCAGTTCGTAGGTTTTTAGCGTACCACAAACAGAACACTATCTCTgg > 2:882888/1‑140 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTG‑GTTAGAACGAAGAAAATAGCCG‑CATCAAAATAATACGGGTCCAGGCAACGTACCAGGGGGTCGTTTTTTGGCCTACCCCCGCCACTCCCGTAggtgagg > 6:769707/1‑134 (MQ=255)
cGCTCCAGAGCTTCTGCAACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCATAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 2:1013279/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAATCGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 1:379439/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 5:769707/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTG‑GTTCGAACGAAGATAATAGCCG‑CATCAAAATCTTACGCTTCCAGGAAACGTTCCAGTGCTTCGTTTTTAAGCATACCCCAGCCAGTACAGGATCTGTgg > 8:911129/1‑138 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGGTTG‑GGGCGAACGAAGATAAACGCCG‑CCGCAAAAACTTACGCGTCCAGGAAACCGACCAGGGCTGAGGTTTTTAGCCTCCCCCCGACCGGCCAGTAGcggggg > 8:861630/1‑133 (MQ=255)
gCTTCTGCCACTTCCAGATTCGCGTTTTTT‑GTACGAACGAATATAATCGCCG‑AATAAAAATCTTCCGCTTCCAGGAATCGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGTCTGATGTCAgg < 5:1019051/140‑1 (MQ=255)
gCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAgg < 4:192907/140‑1 (MQ=255)
cTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGa < 6:847133/140‑1 (MQ=255)
cTTCTGCCACTTCCAGAGTCGCGGTTTTG‑GTACGTACGAATATAATAGACG‑CATAAAAATAGTCCGCTTCCAGGAAACGTACCCGTGCGTGGTTTTTTAACATAACCCAGAAACTCCAGGAGCTCTGGGGGATGTAAggg > 6:884274/1‑139 (MQ=255)
cTGCCACTTCCAGAGTCGCGGTTTTGTGTA‑GAAAGAAGAAAAAAGCCGCCAACAAAA‑ATTAAGCGTGCAGGAAACGTACCAGTGGATGGGTTTTTCGCATACCCCCCACACGCCCGTAGCACTGGGTGAGTTCAGGGCgg > 4:101934/1‑140 (MQ=255)
cACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 7:134495/138‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 8:440322/138‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 7:698362/138‑1 (MQ=255)
cACTTCCAGAGGCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 1:443693/140‑1 (MQ=255)
cACTTCCAGACTCTCGTTTTTG‑GTACGAACGAAGATAATCTCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGCCGGGTAg < 4:366243/140‑1 (MQ=255)
ccatcgTCGCGTTTTTG‑GTAAGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTTCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCGCTGGCTGATGTCAGGACGGGTAGTCACg < 6:274609/135‑1 (MQ=255)
ccAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 6:1028655/140‑1 (MQ=255)
ccAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 2:1065903/140‑1 (MQ=255)
ccAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 6:117312/140‑1 (MQ=255)
ccAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACAGGTAGTCa < 7:687517/138‑1 (MQ=255)
cAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGc < 5:414194/140‑1 (MQ=255)
cAGAGTAGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGAGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCAc < 7:566299/138‑1 (MQ=255)
tCGCGTTTTTG‑GTACGAACGAAGTTAATAGCAG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTATTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTgg < 8:819524/138‑1 (MQ=255)
gcgcgTTTTTT‑GTACGAACGAAGATAATCGCCG‑CAGCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 5:19423/139‑1 (MQ=255)
gcgcgTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 1:336876/139‑1 (MQ=255)
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GTCGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTG‑GTACGAACGAAGATAATCGCCG‑CATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGA > NZ_CP022686/2048951‑2049226
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
