Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,357,324 |
A→C |
21.2% |
N37T (AAC→ACC) |
dcrB → |
phage sensitivity protein DcrB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,357,324 | 0 | A | C | 21.2%
| 314.5
/ 30.6
| 222 | N37T (AAC→ACC) | dcrB | phage sensitivity protein DcrB |
| Reads supporting (aligned to +/- strand): ref base A (107/63); new base C (4/48); total (111/111) |
| Fisher's exact test for biased strand distribution p-value = 4.70e-13 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 225 total aligned reads displayed.
TTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGCAGAAAG > NZ_CP022686/2357185‑2357461
|
tATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAAAATGTCGGAATTGGCCTGCAGGATATGGGGCATGCGGCCAGTGATGATAAATCCACTAACGCTATGGCCCAGGGTTAGGTCGCAGAAAGTAAc > 6:381838/1‑140 (MQ=255)
aTGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAAcg > 6:591940/1‑140 (MQ=255)
tATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGa > 8:1123762/1‑140 (MQ=255)
ggAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGCGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTc > 6:712400/1‑140 (MQ=255)
agacgTCACTGCGAAATCTGGTTAAATATTGCGGAATGGGCCGGGTGGTTAGGGGGCGTGCGGCTGGTGATTAAAACGACACTACCGCTATGGCGCTGGGTGCGGGCGCAGAACGTAACGCGACCGGGAATCCCGTCAAc < 2:1267007/140‑1 (MQ=255)
agaagTCAATGCGCATTCTGGTTAAATATGTCGGAATTGGCCGGCGGGTTCTGGGGCTTGCGGCGTGTGATTAAAAACACAATAACGCTCTGGCGCCGGGTTCGGTCGCATAAATTACCGCGACCGGGAATCCCGTCa < 4:1097525/138‑1 (MQ=255)
tGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCTGAAAGTAACGCGCCCGGGAATCCCGTCAACCTGCTTGag > 2:354510/1‑139 (MQ=255)
tGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt > 5:162387/1‑140 (MQ=255)
cgcAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt > 3:804809/1‑138 (MQ=255)
gcAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACAAACGCTATGGCGCTGGGTTCGGTCGCATAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGc < 8:1029711/140‑1 (MQ=255)
gcAAGCTGGTTAAATATGTCGGAATTGGCCTGCGGGATTTGGGGCTTGCGGCCTTTCATGATAAACCCACTCCCGCTATGGCGCCGGGTTCGGCCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGc < 8:1152787/140‑1 (MQ=255)
aTCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCaag > 1:483109/1‑140 (MQ=255)
tCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCGGTGATGATAAAGCCACTACCGCTATGGCGCAGGGTTCGGTCGCAGAAAGTACCGCGACCGGGAATCCCGTCACCCTGCTGGATGGCaa > 4:700924/1‑138 (MQ=255)
ggTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCaagttaa > 5:1013575/1‑140 (MQ=255)
ttAAATATATCCGAATTGGCCAGCTGGTGATGGGGATTGAGGCCGGGAATGATAAAGCCCCTACCGCTCTGGCTCACGGTTCCGTCGCAGAAAGTAACGCGAGCGGTATACCCTTCAGCCTGGTTGATGGCaagataagt > 8:392441/1‑140 (MQ=255)
aaaTATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCaagttaagt > 4:489804/1‑138 (MQ=255)
tCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTg > 5:306949/1‑140 (MQ=255)
tCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGATATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCACCCTGCTTGATGGCAAGTTAAGTTTCTCGCTg > 1:1148158/1‑140 (MQ=255)
tCGGAATTGGCCTGCTGGTTATGGGGCGTGCGGCCTGTGATGAGAAAGCCACTAACGCGATGGCGCAGGGTTCGGTCGCAGAAAGTACCGCGCCCGGGAGTCCAGTCACCCTGCTTGCAGGCAAGTGAAGTTTATCGCTg > 8:761311/1‑140 (MQ=255)
cGGAATTGGCCTGCTGGTTATGGGGCTTGAGGCCTGTGATGATAAAGACACGAACGCTATGGCGCAGGTTTCGGTCGCAGCATGTAACGCGACCGGGAATCCCGTCTACCTGCTTGATGGCACGTTATGTTTCTCGCTgg > 7:758932/1‑139 (MQ=255)
ggAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTAGCTg > 4:537176/1‑138 (MQ=255)
tattgggCCTGCTGGTTCGGGGGCTGCCGCCCGGTTATGAAAAATCCACTACCGCTATGGCGCTGGGTTCGGCCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGc < 3:1098183/133‑1 (MQ=255)
tatgtGGCGTGCGGGTTCTGGGGCTTGGGGCCTGTTATTATAAAGACACTAACGCTATGGCGCTGGTTGCGGCCGCAGAAAGACACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 1:1053750/136‑1 (MQ=255)
tatatGGCCTGCGGGTTATGGGGCTTGCGGCCGGTGATTATAAAGACACAAACGCTATGGCGCAGGGTTCGGTCGCATAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGc < 4:152982/134‑1 (MQ=255)
taaTTGGCGTGCTGGGTAGGGGGTGTGCGGCCGGGTATTATACACCCAGTAACGCTCTGGCGCCGGGTGGGGGCGCATAAAGTAACGCGACCGGGAATCCCGTCATCCTGATTTATGGCAAGTTAAGTTTCTCGCttgaa < 2:67964/139‑5 (MQ=255)
taaTTGGCCTGGTGGTTTTGGGCCTGGCGGCCTGTGATGATAAACACACTACCGCTATGGCGCAGGGTTGGGTCGCATAAATTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 7:1092892/139‑1 (MQ=255)
taaTTGGCCTGCTGGTTAGGGGGCTGGCGGCCTGTGATGATAAACACACTAACGCTATGGCGCAGGGTTCGGGCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGc < 4:406193/137‑1 (MQ=255)
gatttGGCCTGCGGGTTAGGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCTGGGTTCGGTCGCATAAATTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 2:696427/137‑1 (MQ=255)
gAATTGGCCTGCTGTTTAGGGGGCTTGCGGCCGGGTATCATAACCCCACTACCGCTAGGGCGCCGGGGTCGGGCGCAAAAATTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 1:475141/140‑1 (MQ=255)
gAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTTATTATAAACACACTACCGCTATGGCGCAGGGTTCGGGCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 7:855927/140‑1 (MQ=255)
cttttGGCCTGGTGGTTTGGGGGGTTGGGGCCTGTTATGAAAAATACACTAACGATTTGGCGCTGGGTTCGGGGGCATAATGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 6:170914/137‑1 (MQ=255)
ccTGCTGGTTATGGGGCTTGCGGCCTGTGATTATAAACACACTAACGCTATGGCGCCGGGGGCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGata < 6:738498/140‑1 (MQ=255)
gctgGTTATGGGGCGTGCGGCCGGTTGTGATACAGACACTACCGCTTGGGCGCTGGGTGCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATga < 6:804145/140‑1 (MQ=255)
ctgGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgac > 1:132370/1‑140 (MQ=255)
ctgGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgac > 1:1008024/1‑140 (MQ=255)
ctgGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCAACCGGGAATCCCGTCAACCTGCTTGATGGCAAGATAAGTTTCTCGCTGCCAGCGGATATgac > 8:190638/1‑140 (MQ=255)
ggTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCTCTGCCAGCGGATATgac > 3:702223/1‑138 (MQ=255)
tttgggggATTGCGGCTTGTGATTATAAACAAAATACCGCTATGGCGCTGGGTTCGGTCGCATAATGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgaccgac < 7:811038/136‑1 (MQ=255)
ttggggcttggggctTGTTTTTATAAAGACACTAACGATTTGGCGCTGGGTTCGGTCGCATAAATTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCa < 8:897751/139‑1 (MQ=255)
ttGGGGTTTGCGGCATTTCATGATAAATACAATAACGCTATGGCGTAGGTTTGGGTCTAATAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgaccgac < 4:639720/137‑1 (MQ=255)
ttGGGGCTTGCGGCCTGTTATTATAACGACACTAAGGCTTTGGCGCCGGGTTCGGTCGCAGAAATTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCa < 2:1295744/139‑1 (MQ=255)
tgggggCGTGCGGCCTGTGATGATAAAGACACTACCGCTATGGCGCAGGGTGCGGTCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgaccgac < 4:242264/136‑1 (MQ=255)
ggttggCGGGCTGTGATTATAAACACACTACCGTTAGGGGTCAGGGGTGGGTCGCATAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCATGTTAAGTTTCTCGCTGCCAGCGGAGATGACCGCCCAGAGc < 1:1077204/135‑1 (MQ=255)
ggCTTGCGGCTTGTGATTAAAAATACACTAACGTTAGGGCGCTGGGTTCGGTCGCATAAATAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGc < 5:1068485/140‑1 (MQ=255)
ggCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGc > 2:216474/1‑140 (MQ=255)
ttccGGCGTGTTTTGATAAAGACACTATCGTTATGGGGAAGTTTGCGGTCGCAGTAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCTAGTTAAGTTTCTCGCTGCAAGCGGATATGACCGACCAGAGCGGt < 8:508730/137‑1 (MQ=255)
ttGCGGCGGGTTATGATAAATACACTACCGCTATGGCGCAGGGTGCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt < 5:877335/140‑1 (MQ=255)
ttGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt > 8:305677/1‑140 (MQ=255)
ttGCGGCCTGTGATAAAAAAGACACTAACGCTAGGGCGCTGGGGTCGGGCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt < 2:870389/140‑1 (MQ=255)
ttGCGGCCGGTGATGATAACCACACTACCGCTAGGGCGCCGGGGGCGGGCGCAGAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCg < 3:864464/138‑1 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGAGGGCAAGTTAAGTTTCTCGATGCCAGCGGATTTGACCTCCCAGAGCGGTa > 5:554812/1‑140 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCACCCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTa > 1:1122504/1‑140 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTa > 5:806346/1‑140 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTa > 2:309111/1‑140 (MQ=255)
gCGGCCTGTGATTAAAACCACACTAACGCTATGGCGCTGGGTTCGGTCGCATAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTaa < 1:224447/140‑1 (MQ=255)
gCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGCCCAGAGCGGTaa > 7:484151/1‑140 (MQ=255)
gCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt > 3:335176/1‑138 (MQ=255)
cGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCTGTa > 3:413556/1‑138 (MQ=255)
cGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTa > 3:1190892/1‑138 (MQ=255)
cGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCGTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAg > 2:987727/1‑140 (MQ=255)
attatAACGACAATACCCCTATGGCGCTGGGTGCGGGCGCAGAAAGCACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACg < 5:596573/137‑1 (MQ=255)
attatAAAGAAATTAACGCTTTGGCGCAGGGTTCGTTCGCATAAAGAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACg < 1:659596/137‑1 (MQ=255)
attaaaaaGACACTAACGCTTTGGGGCTGGGGTCGGTCCCATAAAGACCCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACg < 1:71957/135‑1 (MQ=255)
attaaaaaCACACTACCGCTAGGCCGCCGGGTGCGGCCCCACAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACg < 5:375059/135‑1 (MQ=255)
atgatAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGaa < 4:1140502/138‑1 (MQ=255)
atcaaaaaGACCCAACCGCTATGGCGCCGGTGGCGGGCGCACACAGTCCAGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCGGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACg < 1:957146/135‑1 (MQ=255)
atAAAGACAATAACGCTATGGCTCAGGGTTCGGTAGCAGAAAGTAACGCGACCGGGAATCCCTTCAGCCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGCCCAGAGAGGTAAGCTGGGTCCGCAg > 8:627453/1‑140 (MQ=255)
aaaaGCCACTAACGCAATGGCCCAGGGTGCGGTCACACAACGACCCGCGACCGGGAATCCCGTCAACCTACTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCa < 4:1310453/137‑1 (MQ=255)
aaaCACAATAACGCTATGGCGCAGGGTGCGGCCGCAGAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGc < 7:562635/140‑1 (MQ=255)
aaGACACTACCGCTTGGGCGCCGGGTGCGGGCCCACAACGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAgg < 3:221368/138‑1 (MQ=255)
aaGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGCGCGGTAAGCTGGGAACGCAgg > 4:945062/1‑138 (MQ=255)
aaGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAgg > 3:137010/1‑138 (MQ=255)
cacacTACCGCTATGGCGCAGGGTTCGGGCGCAGAAAGTCACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCaa < 8:339716/139‑1 (MQ=255)
cactcccGCTAAGGCGCAGGGTGCGGCCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATa < 2:1352266/134‑1 (MQ=255)
cacTACCCCTATGCCGCAGGGGGCGGCCCCACAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGAACATAGCGGTAAGCTGGGAACGCAGGcgatta < 2:1135589/140‑6 (MQ=255)
cacTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATa < 7:413505/140‑1 (MQ=255)
aacaaccGCTATGGCGCCGGGTTCGGCCGCACAAAGAACCGCGACCGGGAATCCCGTCAACCTGCATGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCaa < 3:1169775/132‑1 (MQ=255)
acTAACGCTCGGGCGCAGGGTGCGGTCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATaa < 1:1371691/140‑1 (MQ=255)
acTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATaa > 8:772405/1‑140 (MQ=255)
tAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAca > 2:552880/1‑140 (MQ=255)
cccctttGGCGCTGGGTTCGGGCCCAAAAACAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAcatg < 7:226996/134‑1 (MQ=255)
ccGCTTTGGCGCTGGGTGGGGTCGAACAAATAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAcatg < 1:376727/139‑1 (MQ=255)
ccGCTAGGGCGCTGGGTGCGTTCGCAGAAAGACACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAcatg < 5:647630/139‑1 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATga < 6:815592/93‑1 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 6:347137/1‑140 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 6:1120239/1‑140 (MQ=255)
gcgcAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGCGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTg > 6:672569/1‑140 (MQ=255)
gggTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTc > 3:521477/1‑138 (MQ=255)
gggTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTc > 3:242410/1‑138 (MQ=255)
cGGTCGCAGAAAGTAAAGCGACCGGGAATCCAGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCgccgcc > 7:521246/1‑140 (MQ=255)
gggcGCATAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCca < 5:697659/137‑1 (MQ=255)
ggTCGCCGAAAGAACCGCGACCGGGAATCCAGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCca < 7:1144260/140‑1 (MQ=255)
ggTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa > 1:1038410/1‑70 (MQ=255)
ggtcaataaaGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATTGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCcac < 5:191592/133‑1 (MQ=255)
gcGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCcaca < 1:979055/139‑1 (MQ=255)
cAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgacc > 6:308427/1‑77 (MQ=255)
aataaaGTCACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAggg < 5:1224527/137‑1 (MQ=255)
aaGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTATCTCGCTGCCAGCGGATATGACCGACCAGAGCCGTAAGCTGGGAACGCAGGCCAATAACAAGCATGTCTGGTCCGACGCCACAGGGCa > 4:1188225/1‑138 (MQ=255)
aaaCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGCAGAAAg < 5:969892/139‑1 (MQ=255)
aaaCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGGCTGGTCCGACGCCACAGGGCAGAAAg < 2:1193086/139‑1 (MQ=255)
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TTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGCAGAAAG > NZ_CP022686/2357185‑2357461
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
