Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F2 I0 R1
|
233 |
6461.8 |
9239822 |
98.3% |
9082745 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,797,493 |
G→T |
12.6% |
G134C (GGT→TGT) |
CIW80_RS19065 → |
LacI family DNA‑binding transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,797,493 | 0 | G | T | 12.6%
| 302.1
/ 7.8
| 138 | G134C (GGT→TGT) | CIW80_RS19065 | LacI family DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (29/87); new base T (18/4); total (47/91) |
| Fisher's exact test for biased strand distribution p-value = 7.22e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 141 total aligned reads displayed.
TATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGACCGA > NZ_CP022686/3797357‑3797632
|
tATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCCCCCCGGCGGCGGTTGTTTTTTTTTGtt > 8:28989/1‑140 (MQ=255)
tATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGtt < 1:59749/140‑1 (MQ=255)
tATGCAGGCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGtt < 8:1010949/140‑1 (MQ=255)
aTGCAGACGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTACTTATTTTTTGttg > 1:555249/1‑139 (MQ=255)
tGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTTTTTTTTGttgt > 3:290618/1‑138 (MQ=255)
tGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGAGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTATATTATTTTTgggtgg > 1:762911/1‑136 (MQ=255)
tCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTATGTATTTTTTGTTCTGAGtt > 4:235395/1‑140 (MQ=255)
tCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGTTTTTTTTGGTTGTCAGtt > 3:726880/1‑140 (MQ=255)
cGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGt < 6:989578/138‑1 (MQ=255)
cGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTg < 7:115381/140‑1 (MQ=255)
gTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTATTTTTGGTTCTCatgt > 5:1137426/1‑135 (MQ=255)
gTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTgg < 1:108832/140‑1 (MQ=255)
ttGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTg < 6:878174/138‑1 (MQ=255)
gcagcaGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGATTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGTCAACCCGGCGGCGTTATTTATTTTTTGTTAGCAGTTggggg > 1:743171/1‑137 (MQ=255)
gcagcaGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGGTg > 4:260074/1‑140 (MQ=255)
gcagcaGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGGTTTTTTTGGTTCTCAGTTGGcgg > 8:764695/1‑138 (MQ=255)
cagcagGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGa < 7:302899/140‑1 (MQ=255)
gcagGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTGAGTTTTTTTTTGTTATGAGTTGGGTggtt > 2:1005493/1‑137 (MQ=255)
tGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTATTTTTGGTTATCAGTTGGCTGATaaaa > 6:153030/1‑138 (MQ=255)
ttAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCAc > 8:653425/1‑140 (MQ=255)
taataaAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTGTAAGTTGGCGGATAAAACTCAcc > 4:1058608/1‑140 (MQ=255)
taataaAAATGAAATCCATCGACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCAGAAAATCTGATGACGCTTCATCAAGGCAACCCCGCGGCGTTATTTAATTTTTGTTCTCACGTTGCTGATAAAACTCa < 6:752429/138‑1 (MQ=255)
aaaTGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAATTTTTTTTGGTTCTCATGTGGGGGATAAAACACACCAGCTaa > 2:362789/1‑139 (MQ=255)
aTGAATTCCAGATACTGCTTGGGTGTCTTGAGTATAATCCTCTCAAAGACTCTGAAATTCTGATGTCGCTTCTTGAAGGCAACCCGGCGGCGTTAGTTATTTTTGGGTCTCAGTTGGCTGATAAAACTCACCAGTTAc < 6:924089/138‑1 (MQ=255)
ttCCATCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGAGGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 4:514896/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCAGCAGATACTCGAGaa < 2:1146443/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCgag < 5:542980/138‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 2:424637/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 2:1079739/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:585216/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:665208/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGAAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 7:835170/140‑1 (MQ=255)
ttCCAGATACTGAGTGGGTTGCATGAGTATAATCAGCTAAAAGAATCTGAAATTCTGATGAGTCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTACGTTGGCTGATAAAAATCACCAGATACTCGAGaa < 8:738313/140‑1 (MQ=255)
ttCAAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAACGAAGCTTAAATTCAGATGACGCTTCTTCAAGTCAACCCGTCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCgag < 6:2652/138‑1 (MQ=255)
ccAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAACGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 5:87607/138‑1 (MQ=255)
aGCTACTGCGTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACa < 3:1142142/140‑1 (MQ=255)
cTACTGCTTGGGTGTCATGAGTATACTCAGCTCAAATAAGCTGAAATTCTGATGACGCTTCTTCCAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACaaa < 2:81993/140‑1 (MQ=255)
cTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACaaa < 3:1106850/140‑1 (MQ=255)
cTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACaaa < 8:112008/140‑1 (MQ=255)
gCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTTTTTTTTGTTGTCAGTTGGCCGTTAAAACTCACCATCAACGCGAGAAAACcaaaaata > 1:333884/1‑135 (MQ=255)
cTTGGGTGTCATGAGTCTAATCAGCTAAAATAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 3:1039208/140‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGACGCGGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTAACCAGATACTCGAGAAAACAAAtata < 6:823064/138‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAAtata < 6:933941/138‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAAtata < 6:52979/138‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 7:558185/140‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 2:522193/140‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCGCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 4:3821/140‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAAtata < 5:155059/138‑1 (MQ=255)
tGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAAc > 4:129129/1‑108 (MQ=255)
tGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAAc < 3:129129/108‑1 (MQ=255)
gcATGAGTATAATCAGCGCCAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTa < 8:1007161/139‑1 (MQ=255)
aTGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAAc < 1:250898/140‑1 (MQ=255)
aTGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTTTTTTTTGTTGTGATTTTGCGTTTAAAAAACACCAGAATCACGAAAAAACAAAAAtaactacaggttaa > 3:310510/1‑133 (MQ=255)
gAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGGTATTTTTGGTTGTCAGTTGGCTGCTAAAACTCACCAGATTCTCGAGAAAACAAATATACCTACCGGTAAc > 6:393097/1‑138 (MQ=255)
aGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACg < 5:186936/138‑1 (MQ=255)
tataATCAGCTCAACGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGt < 8:814562/140‑1 (MQ=255)
aaaTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCg < 7:719702/139‑1 (MQ=255)
aaTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGTTTTTTTTTGTTGTCAGTTGGCTGATAAAACTCACCAGATTCTCGCGAAAAAAAATATACCTACCGTTAAAGTTTTCgg > 3:731369/1‑140 (MQ=255)
aTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGACAACAAATATACCTACCGTTAACGTTGTCGGt < 2:142522/140‑1 (MQ=255)
aTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCggg < 3:979865/140‑2 (MQ=255)
aTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGt < 7:255517/140‑1 (MQ=255)
tCAGCTCAAAGAAGCTGAAATTCTGATGCCGCTTCTTCAAGGCAACCCGGCGGCGTGTGTTATTTTTTGGTTTGAGTTGGCTGAAAAAACTAACCCGCTACTCGAGAAAACCAAAATACCTACCGTTAACCGTTTCGGtt > 3:635027/1‑140 (MQ=255)
tCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGtt < 1:68908/140‑1 (MQ=255)
aGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTTTTTTTTTTTGTTGTAAGTTTGGTGATAAAAAGACACAGTAACTCGGGTAAACAAAAATAACGACCGTTAACGTTGTCgggt > 5:154135/1‑136 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTATTTTTGGTTCTAAGGTGGGTGATAAAACACACCCGATACTAGAGAAAAAAAATATACCTACCGTTAAAGTTGTAGGTTacc > 8:690088/1‑140 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGTTTTTTTTGGGTGTCAGTTGGGGGGTAAAACTCCCCACATAAAAGAGAAAAAAAATATACCGTCCGTTTACGTTTTGGGGTccc > 4:399841/1‑140 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGGTTTTTTTGGTTGTCAGTTGGGGGCTAAAACGCCCCAGATACGCGAGAAAACAAAAATTCCTACCGGTAACGGTGTGGGTTgcc > 3:687632/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTATCAGTTGGCTGATAAAACTCACCAGATTCTCGAGAAAAAAAATATAACTACCCTTAACGTTGTCGGTTaccc > 4:808109/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGTTTTTTTTGGGTGTGAGTTGGCGGATAAAAATCACCAGAGACTAGAGAAAACCAATATACCTACCGGTAAAGTTGTAGGTTcccc > 8:63609/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACACACCAGCTTCTCGAGAAAACAAATATACCTACCGTTAACGTTGTAGGTTcgcc > 8:285505/1‑140 (MQ=255)
cAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTGTCAGTTGGCGGATAAAACTGACCAGGTACTCGAGAAAACAAATATAACTACCCTTAACGGTGTGGGTTgccc > 6:161600/1‑138 (MQ=255)
agaagCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGATTTTTTTGGTTATCATTTGGCTGATAAAACACACCACAAACAAGAGCAAAAAAAAATAACAACCGCTATAGTTGTCGGTTGCCCattga > 1:308803/1‑138 (MQ=255)
cgCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTc < 4:1135159/139‑1 (MQ=255)
cTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTTTTTTTTGTTATCAGTTTGGGGATAAAACTCACCCACTAAGAGCGAAAACAAAAATACCAACCCTTAACCTTGTCGGGTGCCCGGTGAGTCCg > 7:85113/1‑140 (MQ=255)
cTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTATTTTTTGTTGTCAGTTTGCGGATAAAACTCACCAGATACTCGAGAAAAAAAATATAACAAACGTTAACGTTGTAGGTTACCCGTTCAGTccc > 4:927550/1‑139 (MQ=255)
cTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTATTTTTTTTTTGGTCTCAGGTTGGAGATAAAACACACCAGAGACTCGCGCAAACCAAAATAACAAACCGTAACTGTTTCGGGTACCCTTTccggacg > 1:711055/1‑134 (MQ=255)
aaaTTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCt < 2:948480/140‑1 (MQ=255)
aaaTTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCt < 7:147654/140‑1 (MQ=255)
cAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACa < 5:821084/138‑1 (MQ=255)
aCCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTg > 4:920173/1‑35 (MQ=255)
cccGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTg < 8:300008/140‑1 (MQ=255)
cccGGCGGCGTTAGTTATTTTTGGTTCTCAGGTGGATGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTGCCCCTTTCAGTACGGCTCAAATTACCATCGAAACAGCAttttt < 6:211438/138‑1 (MQ=255)
gctgcgTTAGTTATTTTTGGGTCTCAGTTGGCGGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:483515/137‑1 (MQ=255)
gcggggTTAGTTATTTTTGGTTCTCAGTTGGGTGATAAAACTCACGAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:26558/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTTGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACATATATACGTACAGTTATCGTTGTGGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:588282/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGaa < 6:986282/138‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:787187/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 2:362821/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 2:26593/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAAAGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTAACATCGAAACAGCATTTTTTGaa < 5:364435/138‑1 (MQ=255)
gcggagTTAGTTATTTTTTGTTCTCAGTTGGCTGATAAAACTCACCAGTTACTCTAGAAAAAAAATATACCTACCTTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACAATAGAAACTGCATTTTTTGAAGc < 8:558216/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 7:178918/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 4:767284/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCCGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 3:947943/140‑1 (MQ=255)
ttttttGGTTCTCAGTTGGCTGATAAACCTCACCAGATACTCGAGAAAACAAATATACCTACCGTTATCGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATaaa < 5:33325/137‑1 (MQ=255)
ttttGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGa < 1:282696/140‑1 (MQ=255)
tGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGAc < 6:64082/138‑1 (MQ=255)
tGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGAc < 6:779753/138‑1 (MQ=255)
ggTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGAcc > 5:546011/1‑138 (MQ=255)
ggTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGACCGa < 2:761037/140‑1 (MQ=255)
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TATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGACCGA > NZ_CP022686/3797357‑3797632
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
