Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A30 F36 I0 R1
|
275 |
10897.2 |
10515506 |
98.4% |
10347257 |
135.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,357,324 |
A→C |
18.2% |
N37T (AAC→ACC) |
dcrB → |
phage sensitivity protein DcrB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,357,324 | 0 | A | C | 18.2%
| 395.5
/ 36.9
| 234 | N37T (AAC→ACC) | dcrB | phage sensitivity protein DcrB |
| Reads supporting (aligned to +/- strand): ref base A (131/56); new base C (3/44); total (134/100) |
| Fisher's exact test for biased strand distribution p-value = 3.26e-16 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 239 total aligned reads displayed.
TATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGCAGAAAG > NZ_CP022686/2357186‑2357461
|
aTGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTaa > 2:1293930/1‑138 (MQ=255)
gcccGTTTATCGAACGGACCACGTCAATGCGCAATCTGGTTAAATATGGCGGATTTGGCCTGCTGGTTATGGGGCTGGCGGCCTGGGATGATAACGACACTAACGCTATGGCGCCGGGTTCGGTCGCAGAAAGTACcg < 2:883731/136‑1 (MQ=255)
ccGTTTATCGAATGTAACACGTCAATGCCCAAGCTGCTTAAATTTGTCGCAAGTGGCCTGCTGTTTCTGGGGCTGGCGGCCTGTGATGATAAACACAAAAACGCTATCCCGCAGGGTTGGGTCGCACAAAGTAAcgcg < 4:1279398/138‑1 (MQ=255)
tttATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTTGCCTGCTGGTTATGGGGCTTGAGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTAGGTCGCATAAAGTAACGCGACCgg > 6:231127/1‑140 (MQ=255)
agcGAAAGGAAGACGCCACTGCGCAAGCTGGTTAAATATGTCGGAATGGGCCGGCTGGTTATGGGGCTTGCGGCGTGTGATCAAAAAGACAATACCGCTATGGCGCAGGGGGCGGCCCCATAAAGAACCGCGACCggg < 2:682536/136‑1 (MQ=255)
aTCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGCCCggg > 1:135597/1‑138 (MQ=255)
aaGTAAGAAGTCAATGCGCAATCTGTTTAAATATGTCGTAATTGGCCGGCTGGTTATGGGGCTTGCGGCCTGTTATGAAAAACACACTACCGCTAGGGCGCAGGGTTCGGACGCAGAAAGAAACGCGACCGGGAATcc < 2:992362/138‑1 (MQ=255)
tCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGATTGCGGCCTGGGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCt > 8:907298/1‑140 (MQ=255)
aTGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGa > 7:37466/1‑140 (MQ=255)
tGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt > 5:65097/1‑140 (MQ=255)
tGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt > 5:964979/1‑140 (MQ=255)
tGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt > 7:569001/1‑140 (MQ=255)
ggcgcAATCTAGTTAAATATGTCGCATTGGGCCTGGGGGTTAGGGGGCGTGCGGCGGGTGCTGATAACCACACTACCGCTATGGCGCAGGGTTCGGGCGCAGAACTTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt < 8:889205/139‑1 (MQ=255)
gcgcAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTACCGCTATGGCGCAGGGTGCGGGCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATg < 8:520758/140‑1 (MQ=255)
atatGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCACCCTTCTTGATGGCaat > 7:1150087/4‑139 (MQ=255)
aaaTATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCaagttaagt > 1:943251/1‑138 (MQ=255)
aaaTATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCaagttaagt > 4:913077/1‑138 (MQ=255)
ttatGTCGTAATGGGCCTGCTGGTTAGGGGGCTTGGGGCCTGTGATTATAAAGACACTCACGCTATGGCGCAGGGTTCGGTCGCAGACCTTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTtct < 8:229029/139‑1 (MQ=255)
tatGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTtc > 1:912412/1‑138 (MQ=255)
tCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTg > 7:260873/1‑140 (MQ=255)
tCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTg > 5:161427/1‑140 (MQ=255)
tCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAACTTAAGTTTCTCGCTg > 6:567965/1‑140 (MQ=255)
ggAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTg > 2:743964/1‑138 (MQ=255)
ggAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTg > 3:1250214/1‑138 (MQ=255)
ggAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTg > 1:436095/1‑138 (MQ=255)
ggAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGATAAGTTTCTCGCTg > 3:1328400/1‑138 (MQ=255)
ggAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTAGGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTGGAGGGCAAGTTAAGTTTCTCGCTg > 4:832077/1‑138 (MQ=255)
tatttGGCGTGCGGTTTATGGGGCTGGCGGCCGGTGTTTATAAACACACTACCGCTATGGCGCAGGGTGCGGTCGACGAAAGAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 7:1072635/137‑1 (MQ=255)
taaTTGGCGGCCTGGTTTTGGGGCTTGCGGCATGTGATCATAAAGACACAAAGGGTATGGCGCGGGGTTCGGTCTCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGc < 2:1204501/137‑1 (MQ=255)
taaTTGGCCTGCTGGTTATGGGGCTTGCGGCGTGGGATGATAAAGACACAACCGCTATGGCGCAGGGTTCGGGCCCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 8:313005/139‑1 (MQ=255)
gAATTGGCCTGCTGGTTAGGGGGCTTGCGGACTGTTATTATAAACACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAATGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGc < 2:1269073/138‑1 (MQ=255)
aactgggCCGGCGGGTTTGGGGGCGTGGGGCCTGTGATGATCACCACACAACCGCTTGGGCGCTGGGGGCGGTCCCACAATGTCCCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 7:643110/135‑1 (MQ=255)
ggCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGCCACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCg > 1:1126921/1‑138 (MQ=255)
ggCCTGCTGGTTAGGGGGCGTGCGGCCGGTGAAGATACCGACACTACCCCTAGGCCGCAGGGTTCGGTCGCACAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGa < 7:137530/140‑1 (MQ=255)
ggCCTGCGGGTTCTGGGGCTGGCGGCCGGTGATGATAAAGACACTAACGCTATGGCGCCGGGTTCGGGCGCAGAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGa < 8:573549/140‑1 (MQ=255)
ccTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGa > 1:994888/1‑138 (MQ=255)
gctgGTTTTGGGGCTTGCGGCCTGTGATTATAAATACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATga < 8:792030/140‑1 (MQ=255)
ggTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgac > 3:888015/1‑138 (MQ=255)
ggTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTACGGTCGCAGAAAGAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGATAAGTTTCTCGCTGCCAGCGGATATgac > 3:1094218/1‑138 (MQ=255)
ctgtggCTGGCGGCCTGTGATTATAAATACACTATCTCTATGGAGATGGGTTCGGCCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgaccgac < 4:725891/134‑1 (MQ=255)
tttGCGGCCTGTTATTAAAAAGACAATAACGCTATGGCGGCGGGTGCGGTCGCATAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGc < 3:487384/137‑1 (MQ=255)
tggCGGCCTGTGATGATAAAGCCACTAACGCTATGGCGCAGGTGTCGGTCCCATAAATTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt < 8:71527/138‑1 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACTCTATGGCGCAGGGTTCGGTAGCAGAAAGTAACGCGACCGGGAATCCCGTCAAACTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGCGCGGTa > 5:1284639/1‑140 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATg > 5:883526/1‑124 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATg < 6:883526/124‑1 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTa > 5:1072015/1‑140 (MQ=255)
gCGGCCTGTTATTATAACCACAATCCGGCTAGCGCGCCGGGTGGGGGCGAATAAAGTCCCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTaa < 7:881539/140‑1 (MQ=255)
gCGGCCTGTGATGATAAAGACCCTAACGCTCTGGCGCCGGGTTCGGTCGCACAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt < 4:1098614/138‑1 (MQ=255)
gCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGTCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt > 1:767288/1‑138 (MQ=255)
gCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt > 3:63943/1‑138 (MQ=255)
gCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTaa > 7:705712/1‑140 (MQ=255)
gCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTaa > 7:1061123/1‑140 (MQ=255)
cGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCATCCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTa > 3:990361/1‑138 (MQ=255)
ggCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGc > 6:685100/1‑140 (MQ=255)
gtgATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGa > 6:340828/1‑140 (MQ=255)
gtgATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTATCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGa > 8:759149/1‑140 (MQ=255)
ttgatACAGACCCTAACGCAATGGCGCTGGGTGCGGTCGCAGAACGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGaa < 1:566692/137‑1 (MQ=255)
ttgatAAAGACACAACCGCTAGGGCGCGGGGTGCGGTCGAAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACg < 5:808944/139‑1 (MQ=255)
atcatAACGACACACACGCTCGGGCGCAGGGGTCGGGCGAACAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGaa < 4:185233/135‑1 (MQ=255)
aggatAAAGACACTAACGCTAGGGCGCAGGGTGCGGGCGCAGAAAGAAACGCGACCGGGAATCCCGGCAACCTGCGTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGaa < 4:572824/136‑1 (MQ=255)
tgatAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGCCCGGGCATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAAc > 1:823173/1‑138 (MQ=255)
tgaaAAACACACACACGCTCTGCCGCCGGGTGCGGTCGCATAACGTCCCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGc < 6:816989/140‑1 (MQ=255)
taaaaaGACACAAACGCTAGGGCGCAGGGTGCGGTCCCAGAAAGAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCa < 6:1067100/137‑1 (MQ=255)
aaaGACACTAACGCTATGGCGCAGGGATCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAg > 1:313919/1‑138 (MQ=255)
cccacTACCGCTATGGGGCCGGGTGCGGTCCCACAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGcc < 3:992262/136‑1 (MQ=255)
acacAAACGCTATGGCTCAGGGTGCGGTCGCATAAAGTACCGCGACCGGGACTCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAAt < 6:329103/140‑1 (MQ=255)
cccaaaCGCCATGCCGCGGGTGCCGTTCGCAGAAATAACCGCGACCGGGAATCCCGGCAACCTGCTTGATGGCAAGGTAAGTTTCTCGCTGCGAGCGGATATGACCGACCAGAGCGGTAAGATGGGAACGCAGGCCAATa < 8:1248196/136‑1 (MQ=255)
cacTAACGCTATGGCGCAGTGTTCGGTCGGACAAAGTAACGCGACCGGGACTACCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCAGCCAGCGGATATGCCCGAGCAGAGCGGTACCCTGGGAACGCAGGCCac > 4:586113/1‑137 (MQ=255)
cacTAACGCTATGGCGCAGGGTGCGGGCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCGTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCaa < 4:1180367/138‑1 (MQ=255)
aacTACCGCTATGGCGCAGGGTTCGGCCGCCTAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCaa < 1:371693/137‑1 (MQ=255)
aacTAACGCTATGGCGCAGGGTTCGGGCGCACAAAGAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTCAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCaa < 2:1118699/137‑1 (MQ=255)
acTACCGCTATGGCGCTGGGTGCGGGCGCAGAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCGGGGAACGCAGGCCAATaa < 8:1068172/140‑1 (MQ=255)
acTAACGATAGGGCGCAGGGTGCGGCCCCACAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAAt < 3:466178/138‑1 (MQ=255)
tAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCTTCAACCTGCTTTATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATaaaa > 7:989222/1‑138 (MQ=255)
tAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGTTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAca > 6:437382/1‑140 (MQ=255)
aCGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCTAGTTAAGTTTCTCGCTGCCAGCGGATATGCCCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAca > 1:1063153/1‑138 (MQ=255)
aCGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAca > 4:608285/1‑138 (MQ=255)
aCGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAca > 3:1015912/1‑138 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 7:906185/1‑140 (MQ=255)
gcgcAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 1:1108232/1‑138 (MQ=255)
gcgcAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 3:440074/1‑138 (MQ=255)
tgggTGCGGTCTAACAATGTACCGCGACCTTGAATGCCGTCATCCTGCTTGTTGGCAAGTTAAGTTGCTCGCTGACAGAGGATATGAGCGACCAGAGGGTTAAGCTGGGAACGCAGGCCATTAACATGCATGTCTGGt < 2:91504/137‑1 (MQ=255)
ggTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAca > 5:66852/1‑124 (MQ=255)
ggTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGa > 6:163946/1‑140 (MQ=255)
ggTGCGGTCGCAGAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGa < 7:55377/140‑1 (MQ=255)
ttCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGCCCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCAGACg > 5:723478/1‑140 (MQ=255)
cGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACg > 3:396170/1‑138 (MQ=255)
ggTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCca > 7:853235/1‑140 (MQ=255)
gTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGcc > 1:248/1‑138 (MQ=255)
tCGCACAAATAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAATCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCcaca < 6:88941/140‑1 (MQ=255)
gggCACAAAGTACCGCGACCGGGAATCCCGTCATCCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCca < 2:274573/136‑1 (MQ=255)
cAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCCAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAggg > 5:490573/1‑140 (MQ=255)
cAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCTACCAGAGCGGTAAGCTGGGAACGCAGGCCAAGAACATGCATGTCTGGTCCGCCGCCACAggg > 6:1012241/1‑140 (MQ=255)
cAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGATCGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAggg > 5:1034062/1‑140 (MQ=255)
cAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAggg > 5:1220294/1‑140 (MQ=255)
ataacgaaaCGCGACCGGGAATCCCGGCAACCTGCTTGAGGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGc < 5:520242/133‑1 (MQ=255)
aGATAGTAACGCGACCGGGAAGACCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGATCGCAGGCCAATAACATGCATGTCTGGTCCGACGCCAAAgg < 4:398530/138‑1 (MQ=255)
gAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt < 2:777890/39‑1 (MQ=255)
gAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGaa < 1:1290322/97‑1 (MQ=255)
aaaCGCGACCGGGAATCCCGTCAACCTGCTTGCTGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGCAGaa < 1:1337243/137‑1 (MQ=255)
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TATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGCAGAAAG > NZ_CP022686/2357186‑2357461
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
