Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A29 F36 I0 R1
|
179 |
9550.8 |
8038540 |
98.3% |
7901884 |
136.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,357,324 |
A→C |
19.3% |
N37T (AAC→ACC) |
dcrB → |
phage sensitivity protein DcrB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,357,324 | 0 | A | C | 19.3%
| 264.8
/ 22.6
| 168 | N37T (AAC→ACC) | dcrB | phage sensitivity protein DcrB |
| Reads supporting (aligned to +/- strand): ref base A (97/35); new base C (2/34); total (99/69) |
| Fisher's exact test for biased strand distribution p-value = 4.57e-14 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 169 total aligned reads displayed.
TTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGCAGAA > NZ_CP022686/2357185‑2357459
|
ttATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGGTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTaa > 7:324666/1‑140 (MQ=255)
aTGGCCTTTTATCTAAAGGAATAAGTAAATGCGAAATCTGTTTAAATAGGGCGGAATTGGCTTGCTGGTTATGGGGCTTGCGGCCGGTTATGATAAACACACTAACGCTATGGCGCTGGTTTCGGTCCCAGAAAGAAAcg < 2:488285/140‑1 (MQ=255)
gCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGa > 2:798699/1‑140 (MQ=255)
gTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGCCCg > 5:499884/1‑140 (MQ=255)
gTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCg > 2:440649/1‑140 (MQ=255)
gTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCg > 7:278286/1‑140 (MQ=255)
gTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCg > 2:1017459/1‑140 (MQ=255)
tCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGCCCGGGAATCCCGTCAACCTGCt > 2:932084/1‑140 (MQ=255)
aaTGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTg > 3:188353/1‑140 (MQ=255)
tGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt > 3:338546/1‑140 (MQ=255)
tGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt > 3:233320/1‑140 (MQ=255)
tGCGAAATCTGGTTAAATATGTCGGAATGGGCCGGCTGGTTTTGGGGCTTGCGGCCGGTGATGATAAACACACTAACGCTATGGCGCAGGGTGCGGGCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGAt < 4:399336/140‑1 (MQ=255)
gaattCTGTTTAAATATGTGGGAATTGGCCTGATGGTTATGGGGATTGCGGCCTGTGATGATAAAGAAACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAATTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGc < 8:484826/136‑1 (MQ=255)
aTCTTGTTAAATATGTAGGAATTTTAATTCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCaag > 8:886651/1‑140 (MQ=255)
gTTAATTATGTCGGAATTGGCCTGCGGGTTTTGGGGCTTGGGGCGTGTTATTATAAAGACACTACCGCTATGGCGCTGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCaagttaag < 6:300775/140‑1 (MQ=255)
ttAAATATGTCGGAATTGGCCTGGTGGTTATGGGGCTGGCGGCCTGTGATGATAAAGACCCTACCGCTATGGCGCAGGGTTCGGCCGAAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCaagttaagt < 8:75207/140‑1 (MQ=255)
aaTATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTtc > 6:484773/1‑140 (MQ=255)
atatGGCGCAATTGGCCTGGGGGTTATGGGGCTGGCGGCCTGTGATGATAAACACACTAACGCTATGGCGCAGGGGTCGGGCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTtct < 8:703495/140‑1 (MQ=255)
tCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCACCCTGCTTGATGGCAAGTTAAGTTTCTCGCTg > 5:169800/1‑140 (MQ=255)
tCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTg > 6:460342/1‑140 (MQ=255)
tatttGGCGTGATGTTTTTGGGGCTGGCGGCCTGTGATTATAACCACACTACCGCTTTGGCGCAGGGTTCGGGCGCATAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 2:508747/137‑1 (MQ=255)
tatttGGCCTGTGGGTTATGGGGCTTGCGGCCTGGTATGATAAAGACACTAACGCTCTGGCGCTGGGTGCGGTCGCACAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 8:278286/137‑1 (MQ=255)
taatggtccTGCTGGTCATGGGGCTTGCGGCCTGTCTTTCTAAACACACAAACGCTTTGGCGCAGGGTTCGGGCCAAGAAAGAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 6:599038/133‑1 (MQ=255)
taaTTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGGCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 7:386585/139‑1 (MQ=255)
taaTTGGCCTGCGGGTTATGGGGGTTGCGGCCTGTTCTGATAAACACACAACCGCTAGGGCGCTGGGGGCGGGCGCATAAACTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 7:592812/139‑1 (MQ=255)
gacctGGCCGGCTGGGTAGGGGGCTTGCGGCCTGTGATTATAAACACACTAACTCTTTGGCGCCGGGTGCGGCCGCAGAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 8:97658/136‑1 (MQ=255)
gAATTGGCCTGCTGGTTAGGGGGCTTGCGGCCTGTGATGAAAAAGACACTACCGCTAGGGCGCAGGGTTCGGGCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 4:981105/140‑1 (MQ=255)
caaatGGCCTCCTGGTTATGGGGCGAGCGGCCTGTGATGATAAACACAATACCGCTATGGCGCAGGGGTCGGTCGCATAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCa < 8:56265/136‑1 (MQ=255)
ctgGTTATGGGGCTTGCGGCCTGTGATGATAAATACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACTCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATtac > 4:675206/1‑140 (MQ=255)
ctgGTTATGGGGCTTGCGGCCTGTGATGATAAAGCCACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgac > 6:25510/1‑140 (MQ=255)
ctgGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgac > 3:439212/1‑140 (MQ=255)
ctgGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgac > 5:744126/1‑140 (MQ=255)
gggtttgggggGTGGCGGCGTGTTATGATAACTACACTACCTCTTTGGCGCTGGGGTCTGGCGCAGAATTTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATgacc < 1:744365/133‑1 (MQ=255)
ttGGGGCTTGCGGCCTGGCTTTATAAAGACACTAACGCTATGGCGCTGGGGTCGGTCGAATAATGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCa < 1:999614/139‑1 (MQ=255)
ggCTTGCGGCCTGTGATGATAAAGACACTACCGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGc > 7:537290/1‑140 (MQ=255)
ggCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGc > 3:972864/1‑140 (MQ=255)
ttGGGGCTTGTGTTCATAAATACACTAACGCTCTGGCTCTGTTTGCGGGCTAAGAAAGAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt < 7:201608/140‑1 (MQ=255)
ttGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt > 6:397919/1‑140 (MQ=255)
ttGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGt > 5:243752/1‑140 (MQ=255)
ttGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCGGCTTGATGGCAAGTTAAGTTTCTCGATGCCATCGGATATGACCGACCAGAGCGGt > 4:689036/1‑140 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGCTATGACCGCCCAGAGCGGTa > 2:147014/1‑140 (MQ=255)
tGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTa > 3:469891/1‑140 (MQ=255)
tGCGGCCTGTGATGATAAAGACAATAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACAGTTAATACCGTCAACCTGATAGATGGCAAGTTAAGATTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTa > 6:624227/1‑140 (MQ=255)
ggCGGCTTGGTATGATAAAGACACAACGGCTTTGGCGCAGGTTTCGGTGGCATAACGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTa < 4:526740/139‑1 (MQ=255)
gCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTaa > 1:33924/1‑140 (MQ=255)
gCGGCCTGGTATGATAAAGACACTAACGCTATGGCGCTGTGTTCGGTCGAATAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTaa < 8:336519/140‑1 (MQ=255)
tgtgATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTggg > 2:353382/1‑140 (MQ=255)
tgtgATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTggg > 2:37908/1‑140 (MQ=255)
tgtgATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTggg > 8:213393/1‑140 (MQ=255)
tgtgATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTggg > 5:163696/1‑140 (MQ=255)
gtgATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTggta > 8:725407/1‑138 (MQ=255)
ttgatAAAGACACTAACGCTATGGCGCAGGGTTCGGGCGCAGAAAGAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACg < 4:469891/139‑1 (MQ=255)
atgatAAACACACAAACGCTATGGCGCAGGGTGCGGTCGCAGAAAGAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCCGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACg < 4:171946/140‑1 (MQ=255)
atcaaaaaCACACTACCTCTTGGGGGCTGGGGTCGGTCGCATAACTACCCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCTAGTTAAGTTTCTCGCTGCCAGCGGATATGCCCGACCAGAGCGGTAAGCTGGGAACg < 7:204756/135‑1 (MQ=255)
taaaaaGACACTACCCCTATGGCCCAGGGTTCGGTCGCAGAAAGTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCa < 5:736225/137‑1 (MQ=255)
atAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAg > 8:657870/1‑140 (MQ=255)
tAAAGACACTAACGCTATGTCGCAGGGTTCGGTCGCATAAAGTAACGAGCCCGGGAATCCAGTCAAACTGCTTGATGGCAAGTTAAGTTTATCTCTGACAGCGGATATTACAGACCAGAGCGGTAAGCTGGGAACGCAgt > 8:432013/1‑139 (MQ=255)
tAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAAGCCCGTCAAACTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGACCGCAgg > 4:44233/1‑140 (MQ=255)
aaacccacTCACGCTAGGCCGCTGGGTCCGGGCGCACAAACTCACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGc < 5:990121/135‑1 (MQ=255)
aaaGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGc > 6:301047/1‑140 (MQ=255)
aaaGACAAAAACGCAATGGCGAAGGGTTGGGGCGCTGAAAGAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGc < 3:1023984/140‑1 (MQ=255)
gACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCaa > 8:678032/1‑140 (MQ=255)
cacaaccGCTTTGGCGCTGGGTGCGGGCGAAAAAATAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATa < 2:60471/134‑1 (MQ=255)
cacTACCGCTAGGGCGCTGGGTTCGGGCGCAGAAACAACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATa < 1:798699/140‑1 (MQ=255)
cacTAACGCTATGCCGCAGGGTTGGGGCGCATAACTTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATa < 8:885715/140‑1 (MQ=255)
acTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATaa > 3:222748/1‑140 (MQ=255)
tAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAca > 7:693435/1‑140 (MQ=255)
ccccTATGGCGCTGGGTTCGGTCGCAGAAATTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAcatg < 8:493837/137‑1 (MQ=255)
aCGCTAGGGCGCTGGGTGCGGTCGCAGAAATTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAcatg < 6:798191/140‑1 (MQ=255)
cGCTATCGCGCTGGGTTCGGTCCCAGAAAGCACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAcatgc < 3:117383/140‑1 (MQ=255)
cTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCGGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGACCGCAGGCCAATAAcatgcat > 6:570785/1‑140 (MQ=255)
tATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAAcatgcatg > 8:647806/1‑140 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGCCCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 5:683552/1‑140 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGta > 1:786682/1‑139 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 1:532569/1‑140 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 7:188845/1‑140 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 3:592309/1‑140 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 4:31471/1‑140 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 2:884898/1‑140 (MQ=255)
tGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTGGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGAGATGACCGCCCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTc > 5:663856/1‑140 (MQ=255)
cAGGGTTCGGTCGCAGCAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTc > 5:814671/1‑140 (MQ=255)
cAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTc > 3:829812/1‑140 (MQ=255)
aGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTgg < 4:775616/137‑1 (MQ=255)
ggTTGGGTCGCAGAAAGTAACGCTACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGa < 1:619221/140‑1 (MQ=255)
ggTGCGGTCGCAGAAATAAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGa < 3:198972/140‑1 (MQ=255)
ttgggTCCCAGAAAGTAACGCGACCGTGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGTTATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACg < 4:632439/137‑1 (MQ=255)
ttCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACg > 3:860490/1‑140 (MQ=255)
ggTCGCATAAATTACCGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCca < 6:654747/140‑1 (MQ=255)
ggTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGCCCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCca > 2:538098/1‑140 (MQ=255)
ggTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCca > 2:346850/1‑140 (MQ=255)
ggTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAAACTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCTCCCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACCTGCATGTCTGGGCCGACGccc > 4:380561/1‑139 (MQ=255)
tcgactaaaGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCcaca < 6:243752/134‑1 (MQ=255)
tCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCcaca < 1:952093/140‑1 (MQ=255)
gcGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCcaca < 4:910338/139‑1 (MQ=255)
cAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGGAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAggg > 8:92123/1‑140 (MQ=255)
cAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGACCGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAggg > 2:629747/1‑140 (MQ=255)
cAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTACGACGCCACAgtg > 3:111646/1‑138 (MQ=255)
cAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGATAAGTTTCTCTCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAggg > 1:327657/1‑140 (MQ=255)
atcacctAACGCGACCGGGACTCCCGGCACCCTGCTTGATGGCAATGTAAGTTTCTCGCTGCCAGAGTATACGACCGACCCCAGAGGTAAGCTGGTCAAGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGc < 5:516216/134‑1 (MQ=255)
aGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGc > 1:712397/1‑140 (MQ=255)
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TTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTATGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACAGGGCAGAA > NZ_CP022686/2357185‑2357459
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
