Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A30 F36 I0 R1
|
275 |
10897.2 |
10515506 |
98.4% |
10347257 |
135.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,546,394 |
A→C |
12.6% |
V95G (GTT→GGT) |
waaG ← |
glycosyltransferase family 4 protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,546,394 | 0 | A | C | 12.6%
| 353.5
/ 11.6
| 197 | V95G (GTT→GGT) | waaG | glycosyltransferase family 4 protein |
| Reads supporting (aligned to +/- strand): ref base A (103/60); new base C (2/28); total (106/91) |
| Fisher's exact test for biased strand distribution p-value = 4.50e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 205 total aligned reads displayed.
CAGCAGCTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGTTCAAA > NZ_CP022686/2546255‑2546533
|
cagcagCTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATACCAAACATCAGCGGCATAATaaa > 8:1106945/1‑140 (MQ=255)
cagcTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGt > 8:762372/1‑140 (MQ=255)
gcTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGt > 1:324110/1‑138 (MQ=255)
gtgtCGGCTTGCCATGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAAAGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTccc > 3:1021985/1‑137 (MQ=255)
tgtCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCCCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGcc > 8:445453/1‑140 (MQ=255)
gtCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGccc < 7:275368/140‑1 (MQ=255)
ttGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGCTAACGTGACTTCAGGCGATAGAAAAAGACTTTCTCCTGCGCTACTTAATCGGCATAACAAACATACACGGCATAATAAA‑CGTCCAGACCCGGc > 1:1029026/1‑138 (MQ=255)
ttGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGc < 1:171216/138‑1 (MQ=255)
ttGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGc < 4:202279/138‑1 (MQ=255)
cTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCAtttt > 4:216848/1‑138 (MQ=255)
cTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCAtttt > 1:847404/1‑138 (MQ=255)
cTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTGTCTCGGCATAACAAACATCAGCGTCATAATAAA‑CGTCCAGCCCCGGCAttgt > 3:97471/1‑136 (MQ=255)
gTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTttatta < 6:38717/140‑1 (MQ=255)
gTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTttat < 4:499335/138‑1 (MQ=255)
ttCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTaa > 7:982768/1‑140 (MQ=255)
ttCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGAATAATAAA‑CGTCCAGCCCCGGCATTTTATTaa > 6:97392/1‑140 (MQ=255)
cGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCTGCATAACAAACATCAGCGGCATAATAAA‑CGTCCCGCCCCGGCATTTTATTaa > 2:28308/1‑138 (MQ=255)
cGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTaa > 2:1081551/1‑138 (MQ=255)
aaGGTTGGCCGATAAATGGCGGCATATTGGCGAAAACGGGAGGTCTGGCTATATAAAATGCGTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCCGGGCCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAAt < 4:801305/138‑1 (MQ=255)
ggCCGGCTGAAAGGCGGATTATTGGCGATTAGGTGAGGTCAGGCGATAGAAAATGCCTTTCACCTGCGCTATTTTCTGGTCATAACAAACATCTGCGGAATAATAAA‑CGTCCTGCCCCGGCATTTTATTAAATCCAACGa < 8:924863/139‑1 (MQ=255)
gCCCGCTCAAAGGCGGCATAATGGCGATAACGTGCCGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCCACgcc > 8:1049500/1‑138 (MQ=255)
gCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGAc > 5:1022858/1‑140 (MQ=255)
gCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGAGAGAAAAAGCCTTTCTCCTGAGCTACTGTCTCGGCATAACAATCATCAGCGCCATAATAAA‑CGTCCAGCCACGTCATTTTATTAATTCCAACGag > 6:949255/1‑139 (MQ=255)
ccGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGAc > 1:312554/1‑138 (MQ=255)
ccGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGAc > 4:597176/1‑138 (MQ=255)
ccGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGAc > 1:342104/1‑138 (MQ=255)
ccGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGAc > 4:922983/1‑138 (MQ=255)
ccGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGAc > 1:515945/1‑138 (MQ=255)
ccGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGAc > 2:177104/1‑138 (MQ=255)
cAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGccc > 2:501198/1‑109 (MQ=255)
gcATAATGGCGATAACGTGACGTCAGGCGATAGAAAACGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCACCGACTCTATCGACGGGgtg > 6:22920/1‑140 (MQ=255)
gcATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGgtg > 6:625757/1‑140 (MQ=255)
aTAATGTCGATAACGTGACTTCCGGCGATAGAAAAACCCTTTCCCATGCGCTAATTTCGCTGCATAAAAACCATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGtt < 6:303071/140‑1 (MQ=255)
tAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAAACCAACGACTCTATCGACGGGgtgt > 3:467392/1‑138 (MQ=255)
aattGGCTATACCGTGACGTCCGGCTATATAAAAACCGTTTATCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAAAAAC‑CGCCCCCCCCCGGAATTTTATTAAAACCCACGACTCTATCGACGGGgtgt < 2:406386/135‑1 (MQ=255)
tGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAC‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACg > 8:1141021/1‑140 (MQ=255)
ggCGATAGCGTGACGACAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTAGCGACGGGGTGTTCAc > 3:722272/1‑138 (MQ=255)
gCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACg > 2:1002793/1‑138 (MQ=255)
aTAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAAt > 7:65502/1‑140 (MQ=255)
aaCGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGCCTGTATCGCCGGGGTGTTCCAGTAAAt > 3:320774/1‑138 (MQ=255)
aaCGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAAt > 4:1075791/1‑138 (MQ=255)
aaCGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCACGGCATTTTATTAAATCCAACGACTCTATCGACGGTGTGTTCACGTAAAt > 2:725052/1‑138 (MQ=255)
aCGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTTTCGACGGGGTGTTCACGTAAATGTATATGc > 7:827919/1‑140 (MQ=255)
gTCAGGCGATCTAAAAAGCCTTTCTCCTGCGCTAATTTCTCGGCAAAAAAAACATCACCGCAATAAAAAC‑CGCCCAGCCCCGGAATTTTATTAAAACCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGc < 1:587722/138‑1 (MQ=255)
cAGGCTATATAAAAAGCTTTTATCCTGCGATCCTTTCGCGGAAAAACAAACAGCCGCGGCATAATAAC‑CGGCCAGCCCGGGCATTTTATTAAATCCAACGACTCTATCGACGGGGGGTTCACGTAAATGTTTTTGCAccc < 6:847909/140‑1 (MQ=255)
cAGGCGATATAAAACGCCTTTCTCCTGCGCTACTTCCTCGCCAAAACAAACACCCGCGGAATAATAAC‑CGTCCAGCCCCGGAATTTTATTAAACCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCAccc < 6:1169460/140‑1 (MQ=255)
ggCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACAACAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAg > 5:1159507/1‑140 (MQ=255)
tAGAACAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGGCCAGCCACGGCATTTTATTAACTCCACCGACGCTATCGACGGGGTGTACACGTAAATGTTTTTGCACCCAGGCaaa > 8:504985/1‑140 (MQ=255)
tAGAAAACGCCTTTCACCTGCGCTACTTTCAGGGCAAACCAAACATCCCCGCCAAAATAAC‑CGCCCCGCCCCGGCATTTTATAAACTCCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCaaa < 6:66324/140‑1 (MQ=255)
aaaaaGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCaaaa > 3:770426/1‑138 (MQ=255)
aaccatttCTACTGCGCTACTTTCTCGCCATACAAACCATCAGCCGCATAAAACA‑CGCCCCGCCCGGGCATTTTATAAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTc < 6:1051809/135‑1 (MQ=255)
aaGCCTTGATCCTGCCGAACTCTCTCTGCATAAAAACCTGAAGGGGCATAAAAAC‑CGTCCCCCCCCGGATTTTAATAAAAACCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAatat < 2:875457/138‑1 (MQ=255)
aGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGCCGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATAtt > 1:560394/1‑138 (MQ=255)
ttttCACCTGCGATACTTTCCCGCAAAAACAACCACCAGGCCCAAAAAAAC‑CGCCCCCCCCCGGCATTTTAAAAAACCCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCg < 3:209972/137‑1 (MQ=255)
cTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCa > 8:128570/1‑66 (MQ=255)
tcCTGCTCTATTTTCTCGGAATAAAAAACTACCCCGGAAAAAAAAA‑GGCCTACCCCCGTCTTTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTTCACCCAGGCAAAATATTCCGCATTgcg < 6:1261307/140‑1 (MQ=255)
tcCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTg > 3:1299603/1‑138 (MQ=255)
ccttGCGATACTTGATCGGCAAAAAAAAAATCCGCGCCATAAAAAA‑CGTCCCCCCCCGCAATTTTATTAAACCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTg < 4:447235/135‑1 (MQ=255)
ccgtccgcTACTTCCCCGCCAAAAAAAACAGCCGGGCCAAAAAAAA‑CGCCCCCCCCCGGAATTTTATTAAATCCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTg < 3:1084273/133‑1 (MQ=255)
gcgcTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCg > 6:716254/1‑140 (MQ=255)
cgcTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCAtt < 5:729718/58‑1 (MQ=255)
cgcTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCAtt > 6:729718/1‑58 (MQ=255)
cgcTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCgg > 8:373361/1‑139 (MQ=255)
ctactaTCTCGGCATAACAAACATCAGCGGCATAATTAA‑CGTCAAGCACAGCCATTTTATTAAATCCAACGACTCTTTAGACGGGGTGTTCACGTAAATGTTTTTGACCCCAGGCAAAATATTACTCAGTgcgacagg > 2:46627/1‑133 (MQ=255)
caaatttCTCGGAAAAACAACCATCAGCGCCA‑AATAAACCGCCCAGCCCCGGCATTTTATAAAAACCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGa < 7:460166/136‑1 (MQ=255)
taatttCTCGCAATAAAAAACATCAGCGGAATAATAAC‑AGTCCAGCCCCGGCATTTTATTAAAACCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGAt < 7:1246679/137‑1 (MQ=255)
tACTTTCTCGGAATAAAAAACATACGCGGAATAATAAA‑CGACCCGCCCCGGAATTTTATAAAATCCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGAt < 6:276845/140‑1 (MQ=255)
aaCTTACTCGGCATAACAAACTTCAGCGGCATAATAAA‑CGACCAGCCCCGGAATTTTATTAAATCCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTg < 4:557333/137‑1 (MQ=255)
cTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTCCGCCCGTGATTg > 5:936112/1‑140 (MQ=255)
ggCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATg > 4:1275176/1‑138 (MQ=255)
gCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGa > 5:203149/1‑140 (MQ=255)
aacaaacaTCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTa > 5:330856/1‑140 (MQ=255)
aacaTCCGCGCCATAATAAC‑CGTCCACCCCCGGCATTTTATTAAAACCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCg < 7:414130/140‑1 (MQ=255)
aacaTCACCGCAATAATAAA‑CGACAAGCCCCGCCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCATGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAAc < 1:20378/138‑1 (MQ=255)
aacaTCACCCTCATAATAAA‑GGTCCCGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAAc < 4:722048/138‑1 (MQ=255)
aTCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGACCGTGATTGGTATGCGATTTAACCgg > 1:1147215/1‑138 (MQ=255)
cAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACACAGGCAAAATATTCATCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCa > 1:1225282/1‑138 (MQ=255)
cGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTg > 8:949135/1‑140 (MQ=255)
cGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTg > 7:1200097/1‑140 (MQ=255)
gCATAATAAA‑CGTCCACCCCCGCAATTTTATTAAATACCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTg < 4:43417/138‑1 (MQ=255)
ccATAATAAT‑CGTCCAGCACGGGATTTAAATAAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGGTTTTGCAACCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTg < 3:174385/137‑1 (MQ=255)
ccATAATAAC‑CGTCCCGCCCCGCCTTTTTTTTAAAGCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGGATGCGATTTAACCGGCACTTTg < 1:477608/137‑1 (MQ=255)
caaaatacA‑CGACCCGCCCCGGCATTTAATTAAAACCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 5:612082/137‑1 (MQ=255)
caaaaaaaa‑CGTCCAGCCCCGGCTTTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 8:554894/134‑1 (MQ=255)
cATAATAAA‑CGTCCAGCCCCGGATTTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGa < 3:261912/138‑1 (MQ=255)
cATAAAAAC‑CGGCCCGCCGCTGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 5:835286/140‑1 (MQ=255)
aataaaaAA‑CGCCCCCCCCCGTCATTTTATTAAAGCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGa < 2:690450/137‑1 (MQ=255)
aaaaataaC‑CGCCCACCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 5:1183648/137‑1 (MQ=255)
aaaaataaA‑CTGCCCGCCCGGCCATTTTAAAAAAACCAACGACTCTATCGACTGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 5:170386/137‑1 (MQ=255)
aatacA‑CTTCCCGCCCCGGCATTTTATTATCTCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGt < 7:3333/140‑1 (MQ=255)
aataaC‑GGTCCTCCCCCGGTATTTATAAAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGt < 7:761481/140‑1 (MQ=255)
aataaC‑CGTCCACCCCCGGAATTTTATTAAATCCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCa < 2:903355/138‑1 (MQ=255)
aataaC‑CGCCCGGCCCCGGATTTTTATTAAATCCCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCa < 4:1194108/138‑1 (MQ=255)
aaaaaa‑CGTCCACCCCCGTCATTTAATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCa < 3:550894/135‑1 (MQ=255)
ataaA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCTCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAg > 3:43417/1‑138 (MQ=255)
ataaA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAg > 2:780998/1‑138 (MQ=255)
ataaA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAg > 4:670292/1‑138 (MQ=255)
taaA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGGGAGTGGTATGCGATGTAACCGGCACTTTGCTCAGttg > 7:743372/1‑139 (MQ=255)
aa‑CGTCCAGCCCCGTATTTTAATTAATTCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGTTc < 2:1225282/138‑1 (MQ=255)
a‑CGACCAGCACCGGATTTTTTTTAAATCAAACGACTCTATAGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGTTCaaa < 5:257657/140‑1 (MQ=255)
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CAGCAGCTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAA‑CGTCCAGCCCCGGCATTTTATTAAATCCAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGTTCAAA > NZ_CP022686/2546255‑2546533
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
