Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A28 F11 I0 R1
|
246 |
10296.8 |
9866480 |
98.4% |
9708616 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,394,287 |
T→G |
17.0% |
N115T (AAC→ACC) |
chuS ← |
hematinate‑forming heme oxygenase ChuS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,394,287 | 0 | T | G | 17.0%
| 370.2
/ 23.1
| 245 | N115T (AAC→ACC) | chuS | hematinate‑forming heme oxygenase ChuS |
| Reads supporting (aligned to +/- strand): ref base T (90/106); new base G (46/2); total (136/109) |
| Fisher's exact test for biased strand distribution p-value = 1.86e-11 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 258 total aligned reads displayed.
GTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394149‑2394423
|
gTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGtt < 7:608766/140‑1 (MQ=255)
gTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGtt < 3:490597/140‑1 (MQ=255)
ttCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGgtttg > 3:76882/1‑139 (MQ=255)
aTCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCATTgt > 4:1200403/1‑139 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt < 7:805292/140‑1 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATTATCAAAGAACTGAATACACTGGCGTTCGCCACGAGCCGTTTTTTATTTGa > 6:178995/1‑138 (MQ=255)
tGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGAATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTgg > 3:1054561/1‑140 (MQ=255)
tGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAAATTTTAGTAATGCATCGCCCTGATGATCTAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGAtgttt > 7:373505/1‑138 (MQ=255)
gATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGa < 8:250989/140‑1 (MQ=255)
aCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGGCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAaca < 2:643939/140‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCCCGAGCCGTGTTTTATTTGTAGTGGAAAACACAgg > 7:118392/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTCTTTGATGTGGTAAACACAgg > 2:378244/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTATTTGAAGTGGAAAACACTgg > 2:841818/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACAgg > 3:1092713/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTTTGTGGAAAACACTgg > 1:1258662/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGTAAACACAgg > 4:254782/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAacacatg > 2:1271895/1‑137 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTATGATGTGGATAACACggg > 8:185907/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTTATGTGGTAAacacgtg > 3:553840/1‑137 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTTATGTGGAACACAGTgg > 8:688953/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGaaaccccatg > 4:661660/1‑133 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACACTgg > 8:428066/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGAATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACTgg > 2:420892/1‑140 (MQ=255)
ggCCAGAAGCGCACTCCATGCCGACATATCGGTATTGGCGGTGTCATAAACTTTTCGTAATGCATAGCCCTTCTGATCAAAGAACTGAATACTCTGGCGGTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTgg < 1:545678/139‑1 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGcc < 4:459952/140‑1 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTCTTTTATGTGGAAAACACTGGcc > 2:724347/1‑140 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCAAAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGGTTTGGTTAACACAgg > 5:245188/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATAGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTGCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGcc < 8:86998/140‑1 (MQ=255)
aGAAGCTCACTCCATGCCTCCATATCGGTATTGTCTGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCa < 2:589915/140‑1 (MQ=255)
aCTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTTTTTTATTTGGGGAAAACAGGCCCattgattgg > 7:1119165/1‑139 (MQ=255)
aCTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATAATCTGGCGTTCGCCACGAGACGTGTTTTGTTTGATTTTGAAAACACTGGCCCtgtgattgt > 1:234174/1‑139 (MQ=255)
aCTCCATGCCGCCATATCGGTATTGTCGGGGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGGTTGTTTGTGGGGGAACACACTGGCCCaatggtttg > 1:160133/1‑138 (MQ=255)
tCCATGCCGCCATTTCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGAAAAACCTGGCCCATTGATTgaga > 2:1223742/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTATTGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGaaa < 6:138894/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGGAAACACTGGCCCATTGATTGAGAAACa > 7:993552/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 8:628263/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa > 7:521056/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGGAAAACACAGGCCCCATGATTGACaaaaa > 2:254719/1‑138 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCCCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCATTGATGTGGAAAACACAGGCCCATTGATTGAAAAACa > 3:1007872/1‑140 (MQ=255)
tGCCGCCATATCGGTACTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTTATGTGGAAAACACTGGCCCATTGATTGAGAAACa > 2:583552/1‑140 (MQ=255)
ccgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGGTTTATTTGTTGTGGCAAAAACAGGCCCCTAGATTGAGAAAcc > 5:1203452/1‑137 (MQ=255)
gccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACg < 8:521056/140‑1 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTa > 4:708245/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCGTTGATTTGGTAAACACTGGGCCAATGATTGAGCAACAGACGtt > 2:1072023/1‑139 (MQ=255)
atCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTaa < 6:1198636/138‑1 (MQ=255)
gTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTTTTTTATGTGGTAAACACTGGCCCATTTATTTTGAAAAAGACGTaaaaacaa > 1:1178123/1‑135 (MQ=255)
aTTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGGTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACTCTGGCCCATTGATTGAGAAACAGACGTAAATCCAg < 6:1069004/138‑1 (MQ=255)
tctgtgtCATAAACTTTTTGTAATGCTTCGACCTTATGATCAAATAAATGAATACTCTGGCGTTCGCCAAGATCCGTGTTTTCTTTGATGTGGTAAACACTTGCCCATTGATTGAGAATCAGTCGTAAATCCTgcgcg < 5:408203/135‑1 (MQ=255)
tctgTGGCATAAACTTTTAGTAATGCATAGCCCTGATGATCAAAGAACTGAATACGCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGACACAGACGTAAATCCAgcgcgcg < 3:1164048/137‑1 (MQ=255)
taggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTAGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcg < 6:381732/136‑1 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 1:1206857/140‑1 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAAAACTGGCCCCTTTATTTAGAAAAAGACGTAAATACAgcgcccc > 6:949147/1‑135 (MQ=255)
tGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGa < 4:145720/140‑1 (MQ=255)
tGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGa < 3:201641/140‑1 (MQ=255)
ggaaTAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGGAAATCCAGCCCGCCCCGAt > 4:1015860/4‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTTTTGTGGAAAACACAGGCCCCGTGATTGAGAATCCGACGTAAATACAGCCCGCGCgggt > 1:377873/1‑138 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACCTAAATCCAGCGCGCGCGGAt > 4:733373/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCATTGATGTGGAAAACACAGGCCCAATGAATAAAAAACAGACCGAAAAAAAGCGCGCGCAGAt > 1:104358/1‑140 (MQ=255)
cATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGTAAACACATGGCCATTGATTGAGAAAAAGCCGTAAATCCCGCGCACCCGGAt > 6:828786/1‑138 (MQ=255)
tAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAg < 2:93512/140‑1 (MQ=255)
atcTTTTAGTAATGCATCGCCCTGATGATCAAAGAAATGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGa < 3:234243/138‑1 (MQ=255)
ttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 1:850178/105‑1 (MQ=255)
tAATGCATCGCCCTGATGATCAACGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCgg < 3:661660/140‑1 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGGAAACACTGGGCCATTGATTGTGAAAAAGACGTAAATCCAGCGCGCGCGGATTGAGGATAAATCCGGCaa > 8:440342/1‑139 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCTCCACGAGCCGTGTGTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAAAAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTc < 1:735893/140‑1 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATg < 6:571116/138‑1 (MQ=255)
cccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAAACCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGtt > 4:1237678/1‑140 (MQ=255)
cccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTTATGTGGCAAACACTGGCCCCTTGATTTAGCACAAGACGTAAATCCAGCGCGCGCGGATTGAGGGACAATCCGGCATGTGCggt > 8:8014/1‑138 (MQ=255)
ccTGATGATCAAAGAACTTAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTGTATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTc < 8:775336/140‑1 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGTTGTGGAAAACACGGGCCCATTGATTGAGAAAAAGACGTAAATCCAGCCCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAAATCTgg > 7:326452/1‑140 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATTTGGAAAAAACAGGCCCAATGATTGAGAAACATACGTAAAAACCGCGCCCGCGGATTGAGGATAAATACGGCAATTACGTTCAAATGCTgg > 8:402949/1‑140 (MQ=255)
cAAAGAACAGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATGTGGAAAACACAGGGCGATTGAATGAGAAACACACGGAAATACAACGCGCGCGGATTGTGGATCAATCCGGCAAGTCCGGTGAAAAGcatg > 2:744196/1‑137 (MQ=255)
aGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGTTGTGGTAAACACTGGCCCATTGATTGAGAAACAGACGTAAAAACAGCCCGCGCGGCATGAGGAGCCAACCCGCAAGTCCGTTCAAATTCTGGt > 6:59237/1‑138 (MQ=255)
aaCTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGGGGAAAAAACTGGCCCATTGATTGAGAAACAGACGTAAATCCAACGCCACCGGATTGAGGTACAAACCCGGAAGTCAGTTCAAAAGCTggatagt > 8:287976/1‑135 (MQ=255)
tGAATACTCTGGCGTTCGCCACGAGCAGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAAGAGACGTAAAGCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATTCTGGTTTGTGaa < 2:770706/140‑1 (MQ=255)
tGAAAACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGaa < 8:1063185/140‑1 (MQ=255)
gAATACTCTGGCGTGCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGa < 5:264107/138‑1 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTTGAAAACAATGGCCCATTGATTTAGAAACAGACGTAAATACAGCGCGCGCGGATTGAGGATCAATCCGGCAAGTACGTTCAAATTCAGGTTTGTGAACg > 8:545248/1‑140 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGGAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTTTGAACg > 8:974553/1‑140 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTTATGGGGAAAAAACGGGCCCCTTGATTTTGAAACAGACGTTAATTCAGCGCGCGCGGTTTTAGGATAAATACGGCATGTCCGTTCAAAAGGTGGTTtgtttacg > 4:379511/1‑135 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTTCTGTGGGAAACCCGGGCCCCTTGATTTAGAAACAGACGTAAATGCCGCGCGCGCCGCTTGAGGGTCAATCCGGCCAGTCCGTTGAAATGCTGGTTTGTGATCg > 2:662297/1‑140 (MQ=255)
ctctGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCa < 5:505555/138‑1 (MQ=255)
ctctGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCa < 5:689682/138‑1 (MQ=255)
tGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAAc < 2:1183496/140‑1 (MQ=255)
gtcgatCGCCACGAGCCGTGTATTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 6:889278/133‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTTAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:1190091/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCCGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGGTTGTGAACGCACCaa < 5:726359/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:703093/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 4:924207/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:438639/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 1:666446/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:310750/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGATTTCTTTGATGTGTAAAACACTGGCCCATTGATTGAGACACAGACGTAAATCCAGCGCGCGCGGATTGAGTATCAATCCGGCATGTACGTTCAAATGCTGGTTTGTGAACGCACCaa < 6:866068/138‑1 (MQ=255)
ttCGCCACGAGCCGTGGTTTGTTTGATGTGGAAAACACTGGCCCCTTGATTGAGAAACCGACGGAAATCAAGCGCGCGCGGATTGAGGCTCAATCCGGCCTGTCCGGTAAAATGCTGGTTTGTGAACGCCCCAACTTGtt > 8:209097/1‑140 (MQ=255)
cGCCACGAGCCGTGTTTTGGTTGATGTGGAAAACACTGGGCCCTTGGTTGAGAAAAAGACCGAAATACAGCGCGCGCGGATTGATGATCAATCCGGGCTGTCCGTTGAACTGCGGGGTTGTTGACGCAGCAACGTGtt > 6:449622/1‑138 (MQ=255)
ccACGAGCCGTGTTTTGTTTGTTTTGGTAAAAACGGGCCCATTGAGTGTGGAAAAGACGTTAATACAGCGCGCGCGGATTGAGGCTCAATCCGGCATGTACGGTCAAATGGTGGTTTGTGTACGCCCCCAGGTGTTCa > 6:406359/1‑138 (MQ=255)
ccGAGCCGTGTTTTCTTTGATGTGGATAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 2:1007296/139‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATg < 5:949147/138‑1 (MQ=255)
gagaCGTGTGTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGGCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACt < 7:1150363/140‑1 (MQ=255)
gtgtTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCg < 5:562552/138‑1 (MQ=255)
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GTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394149‑2394423
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
