Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
7 2 3
8 2 3
9 2 3
10 2 2
11 2 3
12 2 3
7 13 18

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 22 42
Multiple Base Substitutions 0 0
Deletions 6 24
Insertions 0 0
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 28 66

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 14 0 39.3 2006784 93.7% 1880356 127.6
A7 F35 I1 R1 9 0 49.8 2429418 95.8% 2327382 130.9
A7 F90 I0 R1 112 0 62.4 3167598 93.7% 2968039 127.8
A7 F90 I1 R1 14 0 61.3 3130248 93.6% 2929912 127.1
A8 F51 I1 R1 12 0 63.2 3083448 95.8% 2953943 130.8
A8 F128 I0 R1 85 0 47.3 2421524 93.4% 2261703 127.3
A8 F128 I1 R1 11 0 32.7 1677916 93.6% 1570529 126.9
A9 F40 I1 R1 14 0 60.5 2957478 95.6% 2827348 130.7
A9 F116 I0 R1 135 0 62.5 3185282 93.9% 2990979 127.3
A9 F116 I1 R1 17 0 85.9 4334236 94.0% 4074181 127.8
A10 F28 I1 R1 11 0 72.3 3538314 96.0% 3396781 130.8
A10 F80 I0 R1 62 0 32.1 1641370 93.2% 1529756 127.5
A11 F49 I1 R1 11 0 55.4 2680340 96.0% 2573126 131.0
A11 F135 I0 R1 138 0 60.2 3047926 93.7% 2855906 127.7
A11 F135 I1 R1 20 0 53.7 2718920 93.7% 2547628 127.4
A12 F47 I1 R1 31 0 58.0 2854198 94.9% 2708633 130.2
A12 F130 I0 R1 163 0 73.8 3728540 93.9% 3501099 128.1
A12 F130 I1 R1 13 0 70.6 3568976 93.9% 3351268 128.0

Mutation Needle Plot

Mutation Targets

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