mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 97 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 634324 = | NA (NA) | 421 (2.840) | 14/64 | 13.2 | 73.9% | noncoding (422/768 nt) | IS1 | repeat region |
| ? | REL606 | 964951 = | 168 (1.000) | coding (630/1431 nt) | ycaM | predicted transporter | |||||
| * | ? | REL606 | = 2143675 | NA (NA) | 423 (2.680) +GG |
15/68 | 13.4 | 76.7% | noncoding (157/768 nt) | IS1 | repeat region |
| ? | REL606 | = 2195257 | 136 (0.810) | coding (110/837 nt) | yeiG | predicted esterase | |||||
| * | ? | REL606 | 2143409 = | NA (NA) | 355 (2.320) | 13/66 | 14.1 | 69.0% | noncoding (423/768 nt) | IS1 | repeat region |
| ? | REL606 | 2152960 = | 174 (1.040) | coding (1486/3633 nt) | yehI | hypothetical protein | |||||
| * | ? | REL606 | 3741540 = | NA (NA) | 409 (2.440) | 15/72 | 14.2 | 67.5% | noncoding (426/768 nt) | IS1 | repeat region |
| ? | REL606 | = 3849861 | 197 (1.180) | coding (771/1416 nt) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent | |||||
| * | ? | REL606 | 3356085 = | NA (NA) | 86 (0.600) | 11/62 | 14.6 | 38.4% | noncoding (583/1542 nt) | rrsD | 16S ribosomal RNA |
| ? | REL606 | = 3855593 | 161 (0.960) | intergenic (+14/+40) | yieF/yieG | chromate reductase, Class I, flavoprotein/predicted inner membrane protein | |||||
| * | ? | REL606 | 1454381 = | 85 (0.510) | 15 (0.120) | 9/56 | 14.6 | 13.9% | coding (1933/3846 nt) | hrpA | ATP‑dependent helicase |
| ? | REL606 | 3944634 = | 121 (0.940) | intergenic (+23/‑124) | proM/aslB | tRNA‑Pro/predicted regulator of arylsulfatase activity | |||||
| * | ? | REL606 | = 3625460 | 137 (0.820) | 412 (2.780) | 11/64 | 15.0 | 77.2% | pseudogene (3/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
| ? | REL606 | = 3741805 | NA (NA) | noncoding (161/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | 1278457 = | 168 (1.000) | 271 (2.020) | 9/58 | 15.0 | 66.8% | coding (351/1392 nt) | narK | nitrate/nitrite transporter |
| ? | REL606 | = 1323139 | NA (NA) | noncoding (419/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | 1636386 = | 156 (0.930) | 20 (0.140) | 10/62 | 15.2 | 14.8% | coding (1123/2427 nt) | ynfE | oxidoreductase subunit |
| ? | REL606 | 1678338 = | 97 (0.680) | coding (188/1173 nt) | malY | bifunctional beta‑cystathionase, PLP‑dependent/ regulator of maltose regulon | |||||
| * | ? | REL606 | 1423581 = | 192 (1.150) | 20 (0.130) | 10/64 | 15.6 | 12.4% | coding (1926/2226 nt) | ECB_01342 | conserved hypothetical protein |
| ? | REL606 | = 2271321 | 113 (0.760) | coding (513/651 nt) | atoA | acetyl‑CoA:acetoacetyl‑CoA transferase, beta subunit | |||||