mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 458 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6177257 | 80 (0.700) | 4 (0.040) | 4/228 | NT | 4.8% | coding (284/861 nt) | atpG | ATP synthase subunit gamma |
| ? | NC_002947 | = 6177263 | 83 (0.780) | coding (278/861 nt) | atpG | ATP synthase subunit gamma | |||||
| * | ? | NC_002947 | = 6169264 | 117 (1.020) | 4 (0.040) | 3/230 | NT | 3.5% | coding (1087/1182 nt) | PP_5408 | hypothetical protein |
| ? | NC_002947 | = 6169275 | 110 (1.020) | coding (1076/1182 nt) | PP_5408 | hypothetical protein | |||||
| * | ? | NC_002947 | = 6149201 | 124 (1.080) | 4 (0.040) | 4/232 | NT | 3.3% | intergenic (‑1329/‑1845) | PP_5393/PP_5395 | metal‑binding chaperone/hypothetical protein |
| ? | NC_002947 | = 6149212 | 114 (1.050) | intergenic (‑1340/‑1834) | PP_5393/PP_5395 | metal‑binding chaperone/hypothetical protein | |||||
| * | ? | NC_002947 | 6109641 = | 117 (1.020) | 5 (0.050) | 4/234 | NT | 4.3% | coding (53/972 nt) | PP_5359 | CobW/P47K family protein |
| ? | NC_002947 | 6109666 = | 113 (1.030) | coding (28/972 nt) | PP_5359 | CobW/P47K family protein | |||||
| * | ? | NC_002947 | 6087620 = | 122 (1.070) | 5 (0.050) | 5/226 | NT | 4.5% | intergenic (+15/‑215) | oruR/aphA | ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase |
| ? | NC_002947 | 6087702 = | 99 (0.930) | intergenic (+97/‑133) | oruR/aphA | ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase | |||||
| * | ? | NC_002947 | 6085897 = | 137 (1.200) | 5 (0.050) | 5/236 | NT | 3.5% | coding (951/1437 nt) | aspA | aspartate ammonia‑lyase |
| ? | NC_002947 | 6085934 = | 142 (1.280) | coding (988/1437 nt) | aspA | aspartate ammonia‑lyase | |||||
| * | ? | NC_002947 | 6077877 = | 111 (0.970) | 3 (0.030) | 3/196 | NT | 4.2% | intergenic (‑123/+115) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter |
| ? | NC_002947 | 6077977 = | 49 (0.530) | intergenic (‑223/+15) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter | |||||
| * | ? | NC_002947 | 6071269 = | 107 (0.930) | 3 (0.030) | 3/232 | NT | 3.0% | coding (365/771 nt) | phoU | phosphate transport‑associated protein |
| ? | NC_002947 | 6071306 = | 92 (0.850) | coding (328/771 nt) | phoU | phosphate transport‑associated protein | |||||
| * | ? | NC_002947 | 6067644 = | 99 (0.860) | 3 (0.030) | 3/236 | NT | 3.1% | coding (231/1341 nt) | PP_5322 | metal ion transporter |
| ? | NC_002947 | 6067690 = | 92 (0.830) | coding (277/1341 nt) | PP_5322 | metal ion transporter | |||||
| * | ? | NC_002947 | = 6063028 | 114 (1.000) | 3 (0.030) | 3/234 | NT | 2.6% | intergenic (‑85/‑140) | rubA/ubiC | rubredoxin‑1/chorismate pyruvate‑lyase |
| ? | NC_002947 | = 6063060 | 114 (1.040) | intergenic (‑117/‑108) | rubA/ubiC | rubredoxin‑1/chorismate pyruvate‑lyase | |||||