mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 306 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 106 (0.870) | 4 (0.040) | 4/164 | NT | 3.9% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 100 (0.900) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4634391 = | 113 (0.930) | 8 (0.070) | 8/164 | NT | 7.4% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 95 (0.850) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | 4618029 = | 126 (1.040) | 7 (0.060) | 5/166 | NT | 5.9% | coding (707/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4618065 = | 105 (0.930) | coding (743/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | = 4606703 | 121 (1.000) | 8 (0.070) | 8/168 | NT | 6.2% | coding (998/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4606716 | 130 (1.140) | coding (985/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | = 4593558 | 105 (0.870) | 7 (0.060) | 4/166 | NT | 6.5% | coding (1165/1362 nt) | lgoT | putative L‑galactonate:H+ symporter |
| ? | NC_000913 | = 4593571 | 103 (0.910) | coding (1152/1362 nt) | lgoT | putative L‑galactonate:H+ symporter | |||||
| * | ? | NC_000913 | = 4558313 | 120 (0.990) | 5 (0.050) | 5/154 | NT | 4.3% | intergenic (‑24/+41) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase |
| ? | NC_000913 | = 4558336 | 117 (1.120) | intergenic (‑47/+18) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase | |||||
| * | ? | NC_000913 | 4558302 = | 112 (0.920) | 4 (0.040) | 4/154 | NT | 3.6% | intergenic (‑13/+52) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase |
| ? | NC_000913 | 4558349 = | 117 (1.120) | intergenic (‑60/+5) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase | |||||
| * | ? | NC_000913 | 4555361 = | 137 (1.130) | 11 (0.100) | 6/158 | NT | 8.7% | intergenic (+12/+129) | uxuR/yjiC | fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor/uncharacterized protein |
| ? | NC_000913 | 4555390 = | 108 (1.000) | intergenic (+41/+100) | uxuR/yjiC | fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor/uncharacterized protein | |||||
| * | ? | NC_000913 | 4542537 = | 107 (0.880) | 3 (0.030) | 6/168 | NT | 2.9% | coding (501/597 nt) | fimE | tyrosine recombinase/inversion of on/off regulator of fimA |
| ? | NC_000913 | 4542560 = | 99 (0.860) | coding (524/597 nt) | fimE | tyrosine recombinase/inversion of on/off regulator of fimA | |||||
| * | ? | NC_000913 | 4539648 = | 140 (1.150) | 11 (0.100) | 8/162 | NT | 8.2% | intergenic (‑147/‑1309) | nanC/fimB | N‑acetylnuraminic acid outer membrane channel protein/tyrosine recombinase/inversion of on/off regulator of fimA |
| ? | NC_000913 | 4539669 = | 119 (1.080) | intergenic (‑168/‑1288) | nanC/fimB | N‑acetylnuraminic acid outer membrane channel protein/tyrosine recombinase/inversion of on/off regulator of fimA | |||||