mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 305 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 96 (1.020) | 8 (0.090) | 7/164 | NT | 7.6% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 107 (1.240) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4630216 = | 89 (0.950) | 9 (0.100) | 6/164 | NT | 10.4% | coding (307/1668 nt) | ettA | energy‑dependent translational throttle A |
| ? | NC_000913 | 4630244 = | 73 (0.850) | coding (279/1668 nt) | ettA | energy‑dependent translational throttle A | |||||
| * | ? | NC_000913 | = 4623777 | 105 (1.120) | 5 (0.060) | 4/164 | NT | 5.0% | coding (341/1017 nt) | lplA | lipoate‑protein ligase A |
| ? | NC_000913 | = 4623789 | 93 (1.080) | coding (329/1017 nt) | lplA | lipoate‑protein ligase A | |||||
| * | ? | NC_000913 | 4614132 = | 135 (1.440) | 10 (0.120) | 8/160 | NT | 8.2% | coding (652/780 nt) | yjjV | putative DNase |
| ? | NC_000913 | 4614163 = | 103 (1.220) | coding (683/780 nt) | yjjV | putative DNase | |||||
| * | ? | NC_000913 | 4601572 = | 119 (1.270) | 9 (0.110) | 9/162 | NT | 8.1% | intergenic (‑55/+52) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein |
| ? | NC_000913 | 4601608 = | 95 (1.120) | intergenic (‑91/+16) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein | |||||
| * | ? | NC_000913 | 4586784 = | 125 (1.330) | 8 (0.090) | 5/166 | NT | 6.8% | intergenic (‑23/‑165) | hsdR/mrr | endonuclease R Type I restriction enzyme/methylated adenine and cytosine restriction protein |
| ? | NC_000913 | 4586809 = | 103 (1.180) | intergenic (‑48/‑140) | hsdR/mrr | endonuclease R Type I restriction enzyme/methylated adenine and cytosine restriction protein | |||||
| * | ? | NC_000913 | = 4585317 | 116 (1.240) | 6 (0.070) | 5/164 | NT | 5.5% | coding (1445/3513 nt) | hsdR | endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4585344 | 99 (1.150) | coding (1418/3513 nt) | hsdR | endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | 4536087 = | 98 (1.050) | 5 (0.060) | 5/160 | NT | 5.8% | intergenic (+56/+527) | yjhR/nanS | pseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase |
| ? | NC_000913 | 4536120 = | 73 (0.870) | intergenic (+89/+494) | yjhR/nanS | pseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase | |||||
| * | ? | NC_000913 | = 4531900 | 95 (1.010) | 6 (0.070) | 5/160 | NT | 6.8% | intergenic (‑249/+150) | sgcX/yjhY | putative endoglucanase with Zn‑dependent exopeptidase domain/pseudogene, zinc finger protein family |
| ? | NC_000913 | = 4531914 | 80 (0.950) | intergenic (‑263/+136) | sgcX/yjhY | putative endoglucanase with Zn‑dependent exopeptidase domain/pseudogene, zinc finger protein family | |||||
| * | ? | NC_000913 | = 4515778 | 107 (1.140) | 8 (0.090) | 6/166 | NT | 7.5% | coding (900/2325 nt) | fecA | TonB‑dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR‑interacting protein |
| ? | NC_000913 | = 4515794 | 99 (1.130) | coding (884/2325 nt) | fecA | TonB‑dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR‑interacting protein | |||||