mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 687 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4620353 | 299 (0.830) | 9 (0.030) | 3/94 | NT | 3.2% | intergenic (‑14/‑197) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble |
| ? | CP009273 | = 4620382 | 292 (0.970) | intergenic (‑43/‑168) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble | |||||
| * | ? | CP009273 | = 4619007 | 381 (1.060) | 5 (0.020) | 5/84 | NT | 2.2% | coding (1333/1668 nt) | yjjK | putative transporter subunit of ABC superfamily: ATP‑binding component |
| ? | CP009273 | 4619854 = | 149 (0.550) | coding (486/1668 nt) | yjjK | putative transporter subunit of ABC superfamily: ATP‑binding component | |||||
| * | ? | CP009273 | = 4615692 | 409 (1.140) | 5 (0.020) | 5/98 | NT | 1.3% | intergenic (+12/‑37) | serB/radA | 3‑phosphoserine phosphatase/DNA repair protein |
| ? | CP009273 | = 4615698 | 400 (1.270) | intergenic (+18/‑31) | serB/radA | 3‑phosphoserine phosphatase/DNA repair protein | |||||
| * | ? | CP009273 | = 4603957 | 170 (0.470) | 6 (0.020) | 4/94 | NT | 3.8% | coding (660/780 nt) | yjjV | putative DNase |
| ? | CP009273 | = 4603970 | 162 (0.540) | coding (673/780 nt) | yjjV | putative DNase | |||||
| * | ? | CP009273 | 4603949 = | 163 (0.450) | 5 (0.020) | 4/94 | NT | 3.2% | coding (652/780 nt) | yjjV | putative DNase |
| ? | CP009273 | 4603980 = | 162 (0.540) | coding (683/780 nt) | yjjV | putative DNase | |||||
| * | ? | CP009273 | = 4544210 | 446 (1.240) | 3 (0.010) | 3/94 | NT | 0.63% | intergenic (+32/‑183) | uxuB/uxuR | D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor |
| ? | CP009273 | = 4544226 | 578 (1.910) | intergenic (+48/‑167) | uxuB/uxuR | D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor | |||||
| * | ? | CP009273 | = 4538708 | 350 (0.970) | 7 (0.020) | 3/94 | NT | 2.5% | coding (84/903 nt) | fimH | minor component of type 1 fimbriae |
| ? | CP009273 | = 4538723 | 255 (0.840) | coding (99/903 nt) | fimH | minor component of type 1 fimbriae | |||||
| * | ? | CP009273 | 4535241 = | 413 (1.150) | 4 (0.010) | 3/94 | NT | 1.2% | coding (329/2637 nt) | fimD | fimbrial usher outer membrane porin protein; FimCD chaperone‑usher |
| ? | CP009273 | 4535424 = | 341 (1.130) | coding (512/2637 nt) | fimD | fimbrial usher outer membrane porin protein; FimCD chaperone‑usher | |||||
| * | ? | CP009273 | 4518081 = | 341 (0.950) | 12 (0.050) | 7/80 | NT | 4.6% | coding (654/807 nt) | sgcQ | putative nucleoside triphosphatase |
| ? | CP009273 | 4518097 = | 252 (0.980) | coding (638/807 nt) | sgcQ | putative nucleoside triphosphatase | |||||
| * | ? | CP009273 | 4514659 = | 391 (1.090) | 3 (0.010) | 3/98 | NT | 0.96% | coding (169/906 nt) | yjhH | putative lyase/synthase |
| ? | CP009273 | 4514711 = | 276 (0.880) | coding (117/906 nt) | yjhH | putative lyase/synthase | |||||