mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_vch_pgi | = 1174106 | 31 (1.610) | 4 (0.210) | 4/282 | 2.1 | 12.7% | coding (1060/1074 nt) | ycfT | inner membrane protein |
| ? | NC_000913_3_vch_pgi | = 1174164 | 25 (1.330) | coding (1002/1074 nt) | ycfT | inner membrane protein | |||||
| * | ? | NC_000913_3_vch_pgi | = 4466372 | 17 (0.880) | 3 (0.160) | 3/274 | 2.5 | 17.1% | coding (878/948 nt) | treR | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor |
| ? | NC_000913_3_vch_pgi | = 4466464 | 13 (0.710) | coding (786/948 nt) | treR | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor | |||||
| * | ? | NC_000913_3_vch_pgi | = 4001962 | 12 (0.620) | 3 (0.160) | 3/282 | 2.5 | 17.3% | coding (537/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913_3_vch_pgi | = 4001989 | 17 (0.910) | coding (564/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
| * | ? | NC_000913_3_vch_pgi | 2505963 = | 27 (1.400) | 3 (0.160) | 3/278 | 2.5 | 11.1% | coding (670/1086 nt) | ypdF | Xaa‑Pro aminopeptidase |
| ? | NC_000913_3_vch_pgi | 2505985 = | 22 (1.190) | coding (648/1086 nt) | ypdF | Xaa‑Pro aminopeptidase | |||||
| * | ? | NC_000913_3_vch_pgi | = 3510605 | 14 (0.730) | 3 (0.160) | 3/286 | 2.6 | 17.8% | coding (372/1164 nt) | yhfX | putative pyridoxal 5'‑phosphate binding protein |
| ? | NC_000913_3_vch_pgi | = 3510636 | 14 (0.740) | coding (341/1164 nt) | yhfX | putative pyridoxal 5'‑phosphate binding protein | |||||