Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F72 I0 R1 97 97.5 3322672 98.0% 3256218 140.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 4,001,645 Δ5 bp 100% coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001645 4001649 5 111 [0] [0] 111 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016440 (0.000)100 (1.100) 81/260 NT 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG  >  NC_000913/4001503‑4001787
                                                                                                                                              |                                                                                                                                              
ATTATGGATGGATCTTGTCGAAACGGACGAAGACGAGCGACTGCTCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTGCTTTGAAGACGACTACGGCCTGCAT‑‑‑‑‑CTCCTTCTT                                                                                                                                   <  NB501016:230:HFVJLAFXY:2:11103:24865:19637/151‑1 (MQ=60)
           ATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGA                                                                                                                          >  NB501016:230:HFVJLAFXY:3:21604:21797:6124/1‑149 (MQ=60)
           ATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGACTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGA                                                                                                                          >  NB501016:230:HFVJLAFXY:1:21105:1456:2059/1‑149 (MQ=60)
             CTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGA                                                                                                                          >  NB501016:230:HFVJLAFXY:2:11209:21025:17411/1‑147 (MQ=60)
               TGTCGAACCGGACGACGACGAGCGCCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAG                                                                                                                        <  NB501016:230:HFVJLAFXY:3:11408:3304:18013/147‑1 (MQ=60)
               TGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAA                                                                                                                         <  NB501016:230:HFVJLAFXY:1:21305:6024:6945/146‑1 (MQ=60)
                   GAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCGTCTGTGAAGATGCGGA                                                                                                                 >  NB501016:230:HFVJLAFXY:3:21503:7702:19897/1‑150 (MQ=60)
                    AACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGTGGAAG                                                                                                               <  NB501016:230:HFVJLAFXY:2:11103:6786:13420/151‑1 (MQ=60)
                       CGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATC                                                                                                            <  NB501016:230:HFVJLAFXY:1:21112:17901:3638/151‑1 (MQ=60)
                            GACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCC                                                                                                       <  NB501016:230:HFVJLAFXY:2:21205:17369:13350/151‑1 (MQ=60)
                            GACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCC                                                                                                       <  NB501016:230:HFVJLAFXY:4:11611:24113:11611/151‑1 (MQ=60)
                              CGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCACCCCGCCCGGAACTGGAAGACATCGCAGCATCGGCACGGTTCTTTGAAGCCGCCGACGGCCTGAGT‑‑‑‑‑CTCCTTATTCTTCTTTGAAGATGAGGAAGATCACGCCGG                                                                                                     >  NB501016:230:HFVJLAFXY:1:21211:1883:10208/1‑151 (MQ=60)
                              CGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGG                                                                                                     >  NB501016:230:HFVJLAFXY:3:11402:13910:10120/1‑151 (MQ=60)
                              CGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGG                                                                                                     >  NB501016:230:HFVJLAFXY:3:11608:13079:7528/1‑151 (MQ=60)
                              CGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGG                                                                                                     <  NB501016:230:HFVJLAFXY:2:11111:5661:4531/151‑1 (MQ=60)
                                  GAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAAC                                                                                                 <  NB501016:230:HFVJLAFXY:3:11410:24838:10629/151‑1 (MQ=60)
                                   AGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACT                                                                                                >  NB501016:230:HFVJLAFXY:1:21311:9500:1669/1‑151 (MQ=60)
                                   AGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACT                                                                                                >  NB501016:230:HFVJLAFXY:1:21112:10589:11287/1‑151 (MQ=60)
                                      GACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCC                                                                                              >  NB501016:230:HFVJLAFXY:4:21412:18760:15571/1‑150 (MQ=60)
                                            GCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTCAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGG                                                                                       <  NB501016:230:HFVJLAFXY:4:11407:22665:11126/151‑1 (MQ=60)
                                                          CTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGT                                                                         >  NB501016:230:HFVJLAFXY:3:11512:8989:9990/1‑151 (MQ=60)
                                                              GCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATG                                                                     >  NB501016:230:HFVJLAFXY:1:21305:13122:19153/1‑151 (MQ=60)
                                                               CCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATC                                                                                                                                                >  NB501016:230:HFVJLAFXY:1:21108:5785:1592/1‑80 (MQ=60)
                                                                     CCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGGGATGGTCGTCT                                                              >  NB501016:230:HFVJLAFXY:1:21209:14979:11596/1‑151 (MQ=60)
                                                                       TGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCGTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTCAAGATGCGGAAGATCACGCCGGTAACACCACTGTGGCATTTACCATCCGTGATGGTCG                                                                 >  NB501016:230:HFVJLAFXY:2:11202:16006:19851/1‑146 (MQ=60)
                                                                         GCACCCCGCCCGGAACTGGAAGCCATCGAAGGCTCGGGTCGTTTCGTTGCAGACGACGACGGCCTGCTT‑‑‑‑‑CTCCTTCTTCTTCTTTGCCGATGGGGCAGATCACGCGGGTAACTCCCCTGGGGCATTTACCATCCGTGATGGTCGTCTGTTT                                                          <  NB501016:230:HFVJLAFXY:2:21207:25961:20061/151‑1 (MQ=52)
                                                                         GCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTT                                                          >  NB501016:230:HFVJLAFXY:1:11101:12364:15268/1‑151 (MQ=60)
                                                                            ACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACT                                                       <  NB501016:230:HFVJLAFXY:2:11311:11461:10913/151‑1 (MQ=60)
                                                                            ACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACT                                                       <  NB501016:230:HFVJLAFXY:1:21109:5677:15602/151‑1 (MQ=60)
                                                                               CGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCA                                                                                     >  NB501016:230:HFVJLAFXY:3:11510:8004:12925/1‑118 (MQ=60)
                                                                                 CCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGAGCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCG                                                  <  NB501016:230:HFVJLAFXY:3:21509:2044:3269/151‑1 (MQ=60)
                                                                                  CCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGT                                                 <  NB501016:230:HFVJLAFXY:3:11503:16296:4711/151‑1 (MQ=60)
                                                                                            AAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTGCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAAC                                       <  NB501016:230:HFVJLAFXY:2:11209:6908:15509/151‑1 (MQ=60)
                                                                                              GACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACAATCCGTGATGGTCGTCTGTTTACACTGCG                                                  >  NB501016:230:HFVJLAFXY:3:11610:16119:17713/1‑138 (MQ=60)
                                                                                                    GAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCT                               >  NB501016:230:HFVJLAFXY:4:11407:17052:15651/1‑151 (MQ=60)
                                                                                                    GAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTT                                                                                  >  NB501016:230:HFVJLAFXY:2:21108:24302:14749/1‑100 (MQ=60)
                                                                                                        CATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGCTAACTCCACTGTGGCATTTACCATCCCTGATGGTCGTCTGTTTAC                                                        >  NB501016:230:HFVJLAFXY:3:11501:14079:14929/1‑122 (MQ=60)
                                                                                                         ATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCG                          <  NB501016:230:HFVJLAFXY:1:21103:4317:7945/151‑1 (MQ=60)
                                                                                                         ATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAAC                                       >  NB501016:230:HFVJLAFXY:3:21506:25768:15084/1‑138 (MQ=60)
                                                                                                         AGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCA‑‑‑‑‑GCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCG                          <  NB501016:230:HFVJLAFXY:1:11112:17880:6466/151‑1 (MQ=60)
                                                                                                            GGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTG                                                                        >  NB501016:230:HFVJLAFXY:3:21401:8712:17358/1‑102 (MQ=60)
                                                                                                            GGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTGCTTCTTCTTTGAATATGAGGAAGAGCCCGCCTGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTG                                                    <  NB501016:230:HFVJLAFXY:4:21501:3831:8383/122‑1 (MQ=60)
                                                                                                              CACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGT                     >  NB501016:230:HFVJLAFXY:3:21407:8943:18937/1‑151 (MQ=60)
                                                                                                                 GTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCG                                                  >  NB501016:230:HFVJLAFXY:2:21104:11975:14962/1‑119 (MQ=60)
                                                                                                                   TTCTTTGCAGACGACGACGGCCTGCTT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCG                 <  NB501016:230:HFVJLAFXY:3:11409:14954:18623/150‑1 (MQ=60)
                                                                                                                       TTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATG             <  NB501016:230:HFVJLAFXY:4:21608:25993:2551/150‑1 (MQ=60)
                                                                                                                          AAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTG         >  NB501016:230:HFVJLAFXY:4:21602:25510:4592/1‑151 (MQ=60)
                                                                                                                              CGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCG     >  NB501016:230:HFVJLAFXY:1:21311:5815:18449/1‑151 (MQ=60)
                                                                                                                               GACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT    <  NB501016:230:HFVJLAFXY:2:11105:15784:6591/151‑1 (MQ=60)
                                                                                                                                 CGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG  <  NB501016:230:HFVJLAFXY:4:21406:4471:9510/151‑1 (MQ=60)
                                                                                                                                 CGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT    >  NB501016:230:HFVJLAFXY:2:21105:22327:3388/1‑149 (MQ=60)
                                                                                                                                              |                                                                                                                                              
AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG  >  NC_000913/4001503‑4001787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: