Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F72 I1 R1
|
14 |
98.9 |
3382490 |
97.5% |
3297927 |
140.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
4,001,645 |
Δ5 bp |
coding (220‑224/951 nt) |
corA → |
magnesium/nickel/cobalt transporter |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
4001645 |
4001649 |
5 |
121 [0] |
[0] 122 |
corA |
magnesium/nickel/cobalt transporter |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 4001644 | 0 (0.000) | 121 (1.230) |
91/278 |
0.0 |
100% |
coding (219/951 nt) |
corA |
magnesium/nickel/cobalt transporter |
| ? | NC_000913 |
4001650 = |
0 (0.000) | coding (225/951 nt) |
corA |
magnesium/nickel/cobalt transporter |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTC > NC_000913/4001497‑4001793
|
AAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCT < NB501016:230:HFVJLAFXY:4:21512:2633:14682/150‑1 (MQ=60)
TATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCT > NB501016:230:HFVJLAFXY:1:11309:6840:18616/1‑148 (MQ=60)
ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCT < NB501016:230:HFVJLAFXY:2:21112:2223:4588/141‑1 (MQ=60)
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTT < NB501016:230:HFVJLAFXY:1:11207:10642:14980/151‑1 (MQ=60)
TGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTAATATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAATACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTG < NB501016:230:HFVJLAFXY:1:11207:17650:19167/150‑1 (MQ=60)
GATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGA < NB501016:230:HFVJLAFXY:2:21110:12144:15397/150‑1 (MQ=60)
TGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAG < NB501016:230:HFVJLAFXY:3:11401:6624:12334/147‑1 (MQ=60)
CGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGA < NB501016:230:HFVJLAFXY:4:11507:22587:11892/151‑1 (MQ=60)
CGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGA < NB501016:230:HFVJLAFXY:3:21606:20307:14343/151‑1 (MQ=60)
CGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGG > NB501016:230:HFVJLAFXY:2:21203:5130:6432/1‑150 (MQ=60)
AACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAG < NB501016:230:HFVJLAFXY:2:21302:7189:15751/151‑1 (MQ=60)
AACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGA > NB501016:230:HFVJLAFXY:1:11205:6909:14394/1‑149 (MQ=60)
AACCGGACGACGACGAGCGACTACGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGATG < NB501016:230:HFVJLAFXY:1:11210:21596:20345/151‑1 (MQ=60)
CCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGA > NB501016:230:HFVJLAFXY:1:11311:19019:12293/1‑147 (MQ=60)
CGGCCGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGCCGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATC < NB501016:230:HFVJLAFXY:1:11101:8226:14246/151‑1 (MQ=60)
GACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCC < NB501016:230:HFVJLAFXY:1:11308:24407:1420/151‑1 (MQ=60)
ACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCG > NB501016:230:HFVJLAFXY:2:11105:11919:6636/1‑151 (MQ=60)
GACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGT < NB501016:230:HFVJLAFXY:4:11609:14526:16861/151‑1 (MQ=60)
AGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACT > NB501016:230:HFVJLAFXY:2:11302:5864:9862/1‑151 (MQ=60)
CGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCC < NB501016:230:HFVJLAFXY:2:11107:11828:18896/151‑1 (MQ=60)
ACTATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCAGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATT < NB501016:230:HFVJLAFXY:3:21404:2042:18734/151‑1 (MQ=60)
TCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACC > NB501016:230:HFVJLAFXY:2:21307:13171:7127/1‑151 (MQ=60)
GAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAC < NB501016:230:HFVJLAFXY:4:21601:6897:16769/147‑1 (MQ=60)
GAACTTGGCCAGAGCCTGGCAACCCGACCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAC < NB501016:230:HFVJLAFXY:1:11107:24077:6457/147‑1 (MQ=60)
ACTTGGCCAGAGCCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCG > NB501016:230:HFVJLAFXY:1:11301:6584:3814/1‑151 (MQ=60)
ACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCTGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCG > NB501016:230:HFVJLAFXY:4:11601:8637:15646/1‑151 (MQ=60)
TGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGG > NB501016:230:HFVJLAFXY:2:11307:8371:10831/1‑121 (MQ=60)
GCCAGAGCCTGGCAACCCGCCCTGAACTGGAAGACATCGAAGCATCTGCACGTTTCTTTGAAGACGACGACGGCCTTCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGAATTTACCATCCGTGAT < NB501016:230:HFVJLAFXY:1:11107:3893:16473/150‑1 (MQ=60)
GAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCG < NB501016:230:HFVJLAFXY:2:11304:10537:19777/151‑1 (MQ=60)
AGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CACCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTCTGGCACTTACCATCCGTGATGGACGT > NB501016:230:HFVJLAFXY:2:21201:19327:13983/1‑151 (MQ=60)
GGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCA‑‑‑‑‑GCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGT < NB501016:230:HFVJLAFXY:3:11508:7211:7028/151‑1 (MQ=60)
GGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTG < NB501016:230:HFVJLAFXY:4:21510:13639:6689/149‑1 (MQ=60)
GGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACT > NB501016:230:HFVJLAFXY:3:21411:18768:7440/1‑119 (MQ=60)
GCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTT < NB501016:230:HFVJLAFXY:1:21202:10717:8422/151‑1 (MQ=60)
GCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTT < NB501016:230:HFVJLAFXY:3:11504:14959:18964/151‑1 (MQ=60)
AACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACCTTTCTTTGAAGACGACGACGTCCTGCAT‑‑‑‑‑CTCCTACTTCTTCTTTGAATATCCGGAAGATCACGCCGGTAACTCCACTGTCGCATTTACCAACCGTGATGGTCGACTGTATAC > NB501016:230:HFVJLAFXY:3:21602:4354:8346/1‑151 (MQ=60)
GCCCGGAACTGGAATACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGC < NB501016:230:HFVJLAFXY:2:21309:8551:18386/151‑1 (MQ=60)
GCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTGTACTCTGC > NB501016:230:HFVJLAFXY:4:21503:22912:19542/1‑151 (MQ=60)
CGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTG < NB501016:230:HFVJLAFXY:2:11307:20001:4273/151‑1 (MQ=60)
CTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGT > NB501016:230:HFVJLAFXY:2:21305:25002:14946/1‑151 (MQ=60)
GGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT < NB501016:230:HFVJLAFXY:2:21309:8327:9548/122‑1 (MQ=60)
GGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTG > NB501016:230:HFVJLAFXY:4:21510:7987:6667/1‑104 (MQ=60)
CATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCC > NB501016:230:HFVJLAFXY:4:11409:14998:7917/1‑151 (MQ=60)
CATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCC > NB501016:230:HFVJLAFXY:2:11310:7795:9499/1‑151 (MQ=60)
TCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGTCCTGCAT‑‑‑‑‑CTCCTACTTCTTATTTGAAGATTCGGAAGATCACGACGGTAACTCCACTGAGGCATTTACGATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCG > NB501016:230:HFVJLAFXY:1:11208:3581:9188/1‑151 (MQ=60)
CGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTT < NB501016:230:HFVJLAFXY:2:11108:15209:8834/124‑1 (MQ=60)
GAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCT > NB501016:230:HFVJLAFXY:2:11306:20781:17727/1‑151 (MQ=60)
GGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTG > NB501016:230:HFVJLAFXY:4:11607:17069:14920/1‑84 (MQ=60)
CGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT > NB501016:230:HFVJLAFXY:4:11412:18061:15005/1‑151 (MQ=60)
TCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGT > NB501016:230:HFVJLAFXY:2:11211:21505:16552/1‑150 (MQ=60)
TTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTGCACTGTGGCATTTACCATCCGTGATGGTCGTCTGGTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTC > NB501016:230:HFVJLAFXY:3:11401:14285:1797/1‑137 (MQ=60)
TTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATG > NB501016:230:HFVJLAFXY:3:21609:3168:10755/1‑151 (MQ=60)
TTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTG < NB501016:230:HFVJLAFXY:4:21608:20289:17739/142‑1 (MQ=60)
TTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATG < NB501016:230:HFVJLAFXY:3:21402:22130:6865/150‑1 (MQ=60)
GACGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCAAGCCGGTAACTCCACTCTGGCATTTACCATCCGTGATGGTCGTCTCTTTACTCTGCGTGAGCGTGAACTGCCAGCTTTTCGTCAGTATCGTATGCGT > NB501016:230:HFVJLAFXY:2:21106:5376:12673/1‑151 (MQ=60)
CGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTC < NB501016:230:HFVJLAFXY:4:11511:19383:17986/129‑1 (MQ=60)
ACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACT > NB501016:230:HFVJLAFXY:4:21509:21959:11710/1‑63 (MQ=60)
GGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAG < NB501016:230:HFVJLAFXY:2:11112:24064:18233/151‑1 (MQ=60)
CCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCAGGTTTCTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCTTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAGGCTTGCCCGTAGCCAGTC > NB501016:230:HFVJLAFXY:1:21101:25441:2075/1‑151 (MQ=60)
|
AAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTC > NC_000913/4001497‑4001793
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
