Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F2 I0 R1
|
122 |
5985.5 |
7364544 |
98.3% |
7239346 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,640,925 |
A→C |
15.4% |
R7S (AGA→AGC) |
ygfM → |
molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,640,925 | 0 | A | C | 15.4%
| 195.8
/ 4.5
| 126 | R7S (AGA→AGC) | ygfM | molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base A (49/54); new base C (2/21); total (51/75) |
| Fisher's exact test for biased strand distribution p-value = 3.78e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 128 total aligned reads displayed.
CATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAG > NZ_CP022686/1640791‑1641063
|
cttttATGCGCAATCCATAAACGCGGCGGCCAGTAGGTGGCGTCGGAGGTATGCGCTGGCATAAATAACAGCACCCCTCTTCTTTCAGAGAATAGGGTAAATTAAGGAACGACGATGATTGAAAAATTTTTCAGACCCGa < 3:740390/138‑1 (MQ=255)
ttATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGActc < 1:518695/140‑1 (MQ=255)
cccAACCCAGAAAAGCCGCTGCCAGTATGTGGCGGCGGTTGGATGCGCGGTCATAAATAAAAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACTATGATTGAACAATTTTTCAGACCCGACTCTGt < 6:409558/136‑1 (MQ=255)
aGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACa > 1:197114/1‑140 (MQ=255)
aGCCAGAAAAGCCGCGCCCAGTAGGGGGCGTCGGAGGGAGGCGCGGGCATAAATAACAGCGCCCCTCTTCTTTCTGAGAAGCGGGGAATTTAAGCAAAGACGAGGATTGCACAATTTTTCAGACCCGACTCTGTCGaa < 5:231891/138‑1 (MQ=255)
aGCCAGAAAACCCGCGGCCAGTTTGTGGCGTCGGAGGGCTGCGCTGGCATAAATAACAGCCCCCCTCTTCTTTCAGAGACGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACa < 7:283617/140‑1 (MQ=255)
taaacGCCGCTGCAAGTATGTGGGGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTATTCTTTAAGATAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAgcgc < 4:89056/139‑1 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTATGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACACGCGCTGGAAc > 4:124084/1‑140 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACCAGCGCTGGagc > 8:434482/1‑138 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAAc > 3:753524/1‑140 (MQ=255)
ggCCTGTTTGTGGGGTCTGATGTAGGCGCTGGCATAAATAACAGCCCCCCTCTTATTTCAGATAAGAGGGTAAATAAAGCAACCACGATGATTTAACAATTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGaa < 8:409138/139‑1 (MQ=255)
aGTATGGGGCGCCGGATGGCTGCGCTGGAATAAATAACAGCGCCCCGCTTAATTCAGCGAAGAGGGGAAATTAAGTAAAGACGATGTTTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAgc < 6:50839/138‑1 (MQ=255)
ggCGTCGTAGGGTGGCGCTGGAATAAATAACAGCTCCCCGCTTCTTTCAGAGAAGTGGGTAAATTAAGTAAAGACGATGATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAcc < 4:607377/140‑1 (MQ=255)
ggCGTCGGTTGGATGCGCTGGCATAAAAAACTGCTCCCCTCTTATTTCAGATAAGAGGGGAAATTAAGGAAAGACGATTATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAcc < 2:630729/140‑1 (MQ=255)
ggcGGTTGTATGCGCTGTAAAAATTAACCGATCCCCTATTATTTAATTCAAGAGTTGAAATTACGTAACTACTATTATTGAACAATTTTTCAGACCCGACTCTGTCTAACAAGAGCTGGAAATGAAGCGCCGCTACCAgg < 2:335430/138‑1 (MQ=255)
tCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCTGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGa > 4:881149/1‑140 (MQ=255)
cGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAt > 8:418288/1‑140 (MQ=255)
gatggatgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGa > 3:902564/1‑140 (MQ=255)
ttggttgCGCTTGCATAAAAAACAGCTCACTTTTTCTTTAATTTATTTGGGTAAATTAAGGAAAGACGATTTTTGAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGACCTGAAGCGCCGCTACCAGGATGaa < 8:669115/139‑1 (MQ=255)
gatgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGcc > 2:75216/1‑140 (MQ=255)
atgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGCAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCg > 3:300742/1‑140 (MQ=255)
gcgcTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTc > 1:324201/1‑140 (MQ=255)
cTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 3:221722/1‑140 (MQ=255)
cTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 8:101704/1‑140 (MQ=255)
ggCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCTGTCTgg > 6:44171/1‑138 (MQ=255)
aaataaCAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAATTTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGCAGCGCCGCTACCAGGCTGAAGCCGTCTGGTTCGc > 6:623565/1‑138 (MQ=255)
aataaCAGCCCCCCTCTTTTTTCCGCTAAGTGGGTAAATTACGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgg < 4:221722/140‑1 (MQ=255)
aaaccccTCCCCTCTTCTTTCAGAGAAGAGGGTAAATTACGGAAAGACGATAATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgg < 5:455123/132‑1 (MQ=255)
caccTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAGCAATGTTTCAGACACGACTCGGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCAGGTTCGCCGGGGgcc > 4:45621/4‑139 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 3:319797/1‑140 (MQ=255)
gatCCCCTCTTATTTACGATATGTGGGTAAATTAGGGAAAGACGATGTTTGAAAATTTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca < 6:232914/136‑1 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGCACAATTTTTCAGCCCCGACGCTGTCGCACACGCGCTGGACCTGAAGCGCCGCTACCAGGAGGAAGCCGTCTGGTTCGCCGGGGgcc > 6:808832/1‑137 (MQ=255)
cTCCCCTCTTCTTTCAGAGAAGAGGGGAATTTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGATGCCGGCTGGTTCGCCGGGGgcagca > 4:138479/1‑140 (MQ=255)
tCCCCTCTTCTTTGAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTTAACAATTTATCAGACCCGACTGTGTAGAACAAGCGCTGGAACTGAATCGCCGCTACCAGGATCAACACGTCTGGTACGCCGGGGgcagc > 6:106903/1‑138 (MQ=255)
cccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc > 7:432639/1‑140 (MQ=255)
cctttgcttTCAGACATTTGGGTAAATTAACGAAAGACGATGATTTAAAATTTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 8:735878/134‑1 (MQ=255)
ccgctgcttTCAGATACTAGGGTAAATTAAGTAAACACGATGATTGAAAAATTTTTCAGACCCGCCTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 4:537735/134‑1 (MQ=255)
ccgattcttTCAGAGAAGTGGGGAAATTAAGGAAAGACGATTATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 6:765493/134‑1 (MQ=255)
ccTCTTCTTTCTTAGATGTGGGTAATTTAAGTAAAGACTTTTTTTGAAAATTTTTTCTCACATGACTCTGTCGAACAAGCGCTGGAATTGATGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 6:69810/138‑1 (MQ=255)
ccTCTTCTTTCCGTTAAGCGGGGAAATTACGGAAAGACGATGTTTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 5:808832/138‑1 (MQ=255)
ccTCTTCTTTCATAGAAGCGGGGAAATTAAGCAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 6:605676/138‑1 (MQ=255)
ccTCTTCTTTCAGATATGTGGGGAAATTAAGTAAATACTATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 6:405006/138‑1 (MQ=255)
ccTCTTCTTTCAGAGACGAGGGGAAATTAAGGAAAGACTATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 7:67252/140‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGTGGGGAAATTAAGGAAATACGAGGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 3:688023/140‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTCAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 4:263220/140‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGAGGATTGAACAATTTTTAAGACCCGACTCTGTAGACCAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa > 6:465606/1‑138 (MQ=255)
ccTCTTCTTTAAGAGAATTGGGGAAATTAAGGAAAGACTATGATTGAAAATTTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 4:902564/140‑1 (MQ=255)
ccTCTTCTTACTGAGAAGAGGGGAAATTAAGGAACGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 7:653113/140‑1 (MQ=255)
ccTCTTATTTCAGAGACGAGGGGAAATTACGCAAAGACGATGATTCAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGACGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 7:856685/140‑1 (MQ=255)
ctctgacttCCGAGAAGAGGGGAAATTAAGCACAGACTATCATTGAACAATTTTTCACACCCGACTCTGACGAACAAGCGCGGGAACTGACGCGCCGCTACCAGGATGCAGCCGTCTGGGTCGCCGGGGGCAGCAAACTc < 4:88575/133‑1 (MQ=255)
ctctTCTTTCAGAGAAGAGGGGAAATTAAGTAAATACGATGATTGAACAATTTTTCAGACCCGACTCAGTAGACCAAGCGCTGTAACTGCAGCTCCGCTAACAGGATGATGCCGGATGGTTCGACGGGGGCAGCaacc > 5:816575/1‑136 (MQ=255)
attcttAAAGAGAAGCTGGGAATTAAAGTAAATCCCATGATTTAACAATTTTGCCGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCaa < 2:156047/139‑1 (MQ=255)
ttcttTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAAc > 1:560304/1‑140 (MQ=255)
tttttAAGCGAAGTGGGTAAATTAATCAAATACTATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCaa < 6:858376/136‑1 (MQ=255)
tcttTCCGAGACGTGGTTAAATTACGCAAACAGTATGTTTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 3:290830/140‑1 (MQ=255)
tcttTCAGAGAAGAGGGTAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTGTGGTTCGCCGGGGGCAGCAAACTCAACg < 4:595378/140‑1 (MQ=255)
tcttCCCGAGAAGCGGGGAAATTACGCAACCACCACGATTTAAAAATTTTTCCGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 1:733434/140‑1 (MQ=255)
tatttCATATAAGCGGTTAAATTAAGGAAAGACTATGATTTAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 1:103554/138‑1 (MQ=255)
tatttCAGTGACGTGGGTAAATTAAGGAAAGACGATCAGTCAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 3:367013/138‑1 (MQ=255)
tatttCAGATAATAGGTTAAATTAAGGAAACACTATGATTCAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 1:448083/138‑1 (MQ=255)
tatttCAGATAAGTGGGGAAATTACGTAAAGACGTTGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 7:231333/138‑1 (MQ=255)
ttCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGc > 5:736011/1‑138 (MQ=255)
atagatgaGGGTAAATTAAGGAAAGACTATGATTGAAAAATTTTTACTCCCCGACTCTGTCGAACAAGCGCTGGAAATGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTacac < 2:472592/138‑1 (MQ=255)
agatAAGAGGGGAAATTAAGGAACGACGATCTTTGAACTTTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTacac < 8:115315/140‑1 (MQ=255)
gacatgagGGTAAATTATGTACAGACGTTGATTGAACAATTTTTCAGCCCCGACTCTGTCTAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACAcc < 2:948975/135‑1 (MQ=255)
ggtaaaTTAAGGAAACACTATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTa < 8:316931/137‑1 (MQ=255)
gggATATTAAGGAAATACGATTATTTAAAAATTATGACTACCCGACTCTGTCGAACAAGCGCTGGAACTGACGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTa < 1:109977/140‑1 (MQ=255)
gggAAATTAAGTAATCAGCATGATAGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTa < 7:568167/140‑1 (MQ=255)
gggAAATTAAGGAAAGACGATGATTGAACATTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTa < 2:444050/140‑1 (MQ=255)
ttaaaTTAAGGAAAGACGATGATTGAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTAc < 7:185700/138‑1 (MQ=255)
aTTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACAAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGAt > 7:555659/1‑140 (MQ=255)
tAAGGAACGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTAGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATaa < 8:155622/140‑1 (MQ=255)
caacgccGATGATTGAACTATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACTCTACACCAACCCGTACCGATaaaa < 6:566767/132‑1 (MQ=255)
aaaGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAAAAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAATCCGTCTGGTTCGACGGGGGCAGCAAACTAAACGAGACACCCACCAGTACCGATAAAAAGa > 4:650604/1‑140 (MQ=255)
aGACGATGATTGAACAATTTTTCAGACCCGACTCTGTAGAACAAGCGCTGTAACTGAAGCGCCGCTACCAGAATGAAGCCTTCTGGTTCGCCGGGGGCAGCAACATCACAGCTACACCAACACGTACCTATAAAAAGa > 6:455047/1‑138 (MQ=255)
cctaggatTCAACAATTTTCCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGACGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGc < 7:123315/135‑1 (MQ=255)
aCGATGATTGAACAATTTTTCCGACCCGACTCTGTCGCACAATCGCTGGTACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCTAACTCAACGCTACCCCAACCCTTACCGCTAAAAAGCTTGc > 7:237864/1‑140 (MQ=255)
aCGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt > 4:331303/1‑104 (MQ=255)
aCGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 3:331303/104‑1 (MQ=255)
aCGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCCTACCGATAAAAAGATTGc > 1:954573/1‑140 (MQ=255)
atTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCACACTCAACGCTACACCAACCCGTACCGAGAAAAAGATTGCCATTTc > 8:247357/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTaca < 7:625846/104‑1 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTaca > 8:625846/1‑104 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 3:636641/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 8:239441/1‑140 (MQ=255)
aaCAATTTATCAGACCCGACTCTCTCGAACAAGCGCTGGAACTGAAGCGCCGCAACCAGGATGAAGCCGTCAGGTTCGCCGGGGGCAGCAAACTCAACGCTACTCCAACCCGTACCAATAAAAAGATTGACATTAccaat > 4:669940/1‑137 (MQ=255)
aCAATTTTTCACCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCtt < 5:636411/138‑1 (MQ=255)
cAATTTTTCTAACCCGACTCTGTCGAACAAGCCCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 6:898863/138‑1 (MQ=255)
cAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 6:214682/90‑1 (MQ=255)
cAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa > 5:214682/1‑90 (MQ=255)
aaaTTTTTCAGACCCGACGCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 4:827507/139‑1 (MQ=255)
aaaTTTTTCACCCCCGACTCTGTCGAACACGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 1:470524/139‑1 (MQ=255)
aaaTTTTTCACACCCGACTCTGGCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 2:804798/139‑1 (MQ=255)
tttCAGACCCGACTCTGTCGAAAAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGTGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 2:197114/140‑1 (MQ=255)
ttgacgACCCGACTATGTCGAACAAGCGCTGGAACTGTAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCTACGGGGGCAGCAAACTCAAAGCTACACCAAACCGTACAGATAAAAAGATTGCCATTTCCTTGCAGTATc < 8:131367/135‑1 (MQ=255)
gACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTgg < 5:511460/138‑1 (MQ=255)
gACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 7:418288/140‑1 (MQ=255)
gACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 4:319797/140‑1 (MQ=255)
caCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 4:471155/139‑1 (MQ=255)
aaCCCTACTCTGTCGAACAAGCGGTGGAACTGAAGCGCCGCTACCAGGATGAAGGCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTgg < 6:637175/137‑1 (MQ=255)
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CATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAG > NZ_CP022686/1640791‑1641063
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
