Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F13 I0 R1
|
150 |
9496.0 |
7621532 |
98.4% |
7499587 |
136.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,640,925 |
A→C |
13.8% |
R7S (AGA→AGC) |
ygfM → |
molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,640,925 | 0 | A | C | 13.8%
| 169.5
/ 5.0
| 116 | R7S (AGA→AGC) | ygfM | molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base A (54/43); new base C (2/17); total (56/60) |
| Fisher's exact test for biased strand distribution p-value = 2.89e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 122 total aligned reads displayed.
ATTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAGC > NZ_CP022686/1640787‑1641064
|
aTTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGAc > 1:528826/1‑140 (MQ=255)
ttCCATTTATGCGCAAGCCATAAAAGCCGCTGCCAGTTTGTGGGGTCGGATGGATGGGCTGGAATAAATAACAGCTCCCCTGTTCTTTCTGAGATGAGGGTAAATTATGGAAAGACGATGATTGAACAATTTTTCAGAcc < 6:524755/140‑1 (MQ=255)
aaTTTATGCGCAAGCCATAAAAGCCGCTGCCAGTATGTGGCGGCGGTTGGATGCGCTGGAATAAATAACAGGTCCCCTGTTTTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGa < 8:183911/139‑1 (MQ=255)
cAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGCCTCTGTCGaa > 5:509396/1‑140 (MQ=255)
cAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGaa > 3:450305/1‑140 (MQ=255)
acccAGAAAACCCGCTCACAGTATGTGGCGTCGGATGTATGCGCTGGAAAAAATAACAGCTCCCCTATTATTTCAGATAAGAGGGTAAATTAAGTAAAGACGATTATTGAACAATTTTTCAGACCCGACTCTGTCGAACa < 7:435663/138‑1 (MQ=255)
aGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACa > 3:727445/1‑140 (MQ=255)
gCCAGAAAAGCCGCTGCCAGTATGAGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTATTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGATCAATTTTTCAGACCCGACTCTGTCGAACaa > 5:629999/1‑140 (MQ=255)
taaaaGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAgcgc < 2:64633/139‑1 (MQ=255)
caaaaGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCAAAAATAACAGCTCCCCTCTTCTTTCAGAGAAGTGGGGAAATTATGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAgcgc < 2:733607/139‑1 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAAc > 3:347499/1‑140 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAAc > 5:928470/1‑140 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAAc > 1:955223/1‑140 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAAc > 3:347497/1‑140 (MQ=255)
tctgtgGCGTCGGATGGATGCGCTGGAATAAATAACCGCGCCCCTTTTCTTTCTTAGAAGAGGGGAATTTATGGAACGACTATGATTGACCAATTTTTCCGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGcgccg < 5:685761/138‑1 (MQ=255)
gggcgggggatggatGCGCTGGCATAAATAACAGCTCCCCTCTTCTTGCAGAGAAGAGGGTAAATTAAGGAAAGACGATGATTCAACATTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc < 8:60981/133‑1 (MQ=255)
gggCGTCGGTTGGAGGCGCTGCAATAAAAACCAGCTCCCGTTTTTTTTCTGATATGCGGGTAAATTAAGGAAACCCCATTATTTAACATTTTTGCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc < 2:330542/139‑1 (MQ=255)
tCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAGCACGCGCTGGAACTGAAGCGCCGCTACCAGGa > 7:670820/1‑140 (MQ=255)
cGGGTGGATGCGCGGGCATAACTAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGCCGATGATTGAACCATTTTTCAGACCCGCCTCTGTCGAACAAGCGCTGGCACTGAAGCGCCGCTACCAggcg > 4:659948/1‑138 (MQ=255)
cGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAt > 5:4487/1‑140 (MQ=255)
cGGATGGATGAGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAt > 6:895403/1‑140 (MQ=255)
ttggatgCGCTGGAATAAATAACAGCTCCCCTCTTCTTTCAGATAAGTGGGTAAATTAAGGAAAGACGATGATTGAACATTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGaa < 6:739826/139‑1 (MQ=255)
tgcatgCGCTGGCATAAATAACTGCTCCCCTTTTATTTCTGAGATTCGGGTAAATTACGGAATGACGTTGATTTAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAg < 2:970691/137‑1 (MQ=255)
gggatgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGTGAATAGGGGAAATAAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAg < 8:426728/139‑1 (MQ=255)
atgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAATGAAAGACTATGATAGAACAATTTTTCAGACCCGACTCTGTCGAACACGCGCTGGAACTGAACCGCCCCTACCAGGAAGAAGCCg > 8:65908/1‑140 (MQ=255)
atgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCg > 7:669441/1‑140 (MQ=255)
cgcTGGCAAAAATAACAGCGCCCCTATTCTTTCCGAGAAGTGGGTAAATTAATTAAATCCTATGATTTAACAATTTTTCCGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCt < 4:938366/140‑1 (MQ=255)
cTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 1:33694/1‑140 (MQ=255)
cATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCg > 4:614170/1‑140 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGCGGGGAAATTAAGGATAGACGATGATTGAACAATTTTTCGGACCCGACTCTGTCGATCAAGCGCTGGGACTGAAGCGCCGCTACCAGCATGACGCCGGCTGGGTCTCCGGGGgcg > 7:145182/1‑139 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGATCAAGCGCTGGAACTGAAGCGCCGCTACAAGGATGAAGCCGTCTGGTTCGACGGGGgca > 7:534423/1‑140 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 5:901998/1‑140 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGAATGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCAGGAACTGAAGCGCCGCTACCAGGATCAAGCCGTCTGGTTCGCCGGGGgca > 8:278860/1‑140 (MQ=255)
gccccccTCTGCTTTCCTCGAATCGGGGAAATTACGTCAAGCCGATGATGTAACAATTTTACAGCCCCGACTCTGGCGAACAAGCGCTGGAACTCAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagc < 7:71328/137‑1 (MQ=255)
ccgccccTCTTCTTACCTCTATGAGGGGAAATAACGGAAAGACTATCATTTAACTATTATTCGTCCCCGACTCTGTCGAACTAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagc < 6:298109/137‑1 (MQ=255)
cccccccTCTTCTTTCATAGACGAGGGGAAATTAATGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagc < 4:155791/137‑1 (MQ=255)
cTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagca > 6:365872/1‑140 (MQ=255)
cTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagca > 4:218814/1‑140 (MQ=255)
ccccTCTTCTTTCCGACACGAGGGTAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 3:228674/140‑1 (MQ=255)
ccccTCTTCATTCAGAGAAGAGGGGAATTTAAGGAAAGACGATGAGTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACAGAAGCGCCGCTTCCAGTATGAAGCCGTCTGGTTCGCCGGGGGCAGCcaa > 1:274877/1‑140 (MQ=255)
cccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc > 3:787779/1‑140 (MQ=255)
cccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc > 3:627595/1‑140 (MQ=255)
cccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc > 1:945000/1‑140 (MQ=255)
cttcttgtTTCAGATATGAGGGTAAATTACGCAAAGACTATGATAGAACATTTTTTCACCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 2:278533/138‑1 (MQ=255)
cgtcttctTTCAGACATGAGGGTAAATTAAGTAAAGACGATGATTCAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 3:109352/138‑1 (MQ=255)
ccTCTTCTTTCATATAAGAGGGGAATTTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 2:876976/140‑1 (MQ=255)
ccTCTTCTTACAGAGAAGAGGGTAAATTAAGCAAAGACGATGATTCAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 7:387968/140‑1 (MQ=255)
ccTCTTCTATCATAGAAGAGGGTAAATTAAGGAAAGACGATGATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 1:730516/140‑1 (MQ=255)
ccTCTTATTTCAGAGAATCGGGTAAATTAAGCAACGACGATGATTGAACAATTTTTCCGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 1:279206/140‑1 (MQ=255)
ccTCTTATTTCAGAGAAGAGGGTAAATAAAGGAAAGACGATGATTTAACAATTTTACAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 1:396744/140‑1 (MQ=255)
tttcttTCAGAGAAGTGGGTAAATTAAGTAAAGACGATTATTGAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCaa < 4:347499/139‑1 (MQ=255)
ttcttTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAAc > 7:211406/1‑140 (MQ=255)
tcttTCATAGAAGTGGGTAAATTAAGTAAAGACTATGATTTAAAATTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 5:425639/140‑1 (MQ=255)
tcttTCAGAGAATAGGGGAAATTAAGGAAAGACGATGATTTAACATTTTTTAACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 8:741168/140‑1 (MQ=255)
tcttTCAGAGAAGTGGGTAAATTATGGAAACACGATGATTTAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 6:356573/140‑1 (MQ=255)
tcttTCAGAGAAGTGGGTAAATTACGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 7:622314/140‑1 (MQ=255)
tcttTAATATAAGAGGGTAAATAAAGTAAAGACTATTATTGAACAATTTTTCATACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 5:137811/140‑1 (MQ=255)
tcttACAGAGAAGAGGGGAAATTAAGGAAACACGATCATTGAACAATTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 6:606138/140‑1 (MQ=255)
tttAAGATAAGTGGGTAAATTAAGTAAAGACGATGATTTAACAATTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCt < 2:142733/140‑1 (MQ=255)
tCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCACCGCtcc > 1:620545/1‑138 (MQ=255)
tCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTac > 3:810185/1‑140 (MQ=255)
tCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTac > 8:369126/1‑140 (MQ=255)
agagAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTacac > 6:199752/1‑140 (MQ=255)
gagtAGTGGGTAAATTAAGGAAAGACTTTGATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGACCTGACGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACAcc < 2:98553/140‑1 (MQ=255)
agaagaGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCa > 2:134161/1‑140 (MQ=255)
ggtaaaTAAAGTAAAGACGATGATTCAACAATTTTGCCGCCCCGACGCTGTCTAACAAGCGCGGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTa < 1:207393/137‑1 (MQ=255)
gtaaaTTAAGTTAACACTATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGTATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTAc < 4:910233/138‑1 (MQ=255)
ggAAATTAAGGAAAGACGATGATTGAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTAc < 2:955223/140‑1 (MQ=255)
aTTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAACCTCAACGCTACACCAACCCGTACCGAt > 7:795510/1‑140 (MQ=255)
gAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAg > 4:90652/1‑140 (MQ=255)
aGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACACGCGCTGGAACTGAATCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAGCGCTCCACCAACCCGTACCGATAAAAAGAtt > 2:207402/1‑140 (MQ=255)
aGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCACCCCGTACCGATAAAAAGAtt > 5:706832/1‑140 (MQ=255)
gattatTTAACATTTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGACGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCa < 2:550162/140‑1 (MQ=255)
gatcatTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCa < 3:960566/140‑1 (MQ=255)
attaaaaaTTTTTAACACCCGACGCTGTCGAACCAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTcc < 5:511350/134‑1 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGCTTGACATTTCATTg > 4:967990/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 1:508683/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 4:642266/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 4:619653/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 7:393076/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 8:393076/140‑1 (MQ=255)
cAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa > 2:774845/1‑140 (MQ=255)
aattttttCAGCCCCGACTCTGTCGAACAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTTCACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 7:393062/137‑1 (MQ=255)
aattttttCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 1:497772/137‑1 (MQ=255)
aaaTTTTTCTCCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTTTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 4:386454/139‑1 (MQ=255)
aaaTTTTTCCTCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCATGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCTATAAAAAGATTGCCATTTCCTTGCa < 5:642438/139‑1 (MQ=255)
aaaTTTTTCCGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 2:252075/139‑1 (MQ=255)
aaaTTTTTCCGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 4:450692/139‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTTAAGCGCCGCTACCATGATGAAGCCGTCTGGTTCGCCGGGTGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAATAGATTGCCATTTCCTTGCa < 5:744645/139‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 3:614170/139‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 6:171052/139‑1 (MQ=255)
aaaTTTTTCACCCCCGACTCTGTCGAACAAGCGCTGCTACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 7:872488/139‑1 (MQ=255)
tttCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGTTGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 4:372127/140‑1 (MQ=255)
tttCAGACCCGACTCTGTCGAACAAGCGATGGAACTGAAGCGCCGCTACCAGTATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 4:9759/140‑1 (MQ=255)
ttacAGACCCGACTCTGTCGAACAAGCGCGGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 4:450305/137‑1 (MQ=255)
gACCCGAGTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCATGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 7:8686/140‑1 (MQ=255)
caCCCGCCTCTGTCGAACACGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGGAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 3:371545/139‑1 (MQ=255)
caCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 8:787158/139‑1 (MQ=255)
caCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 8:440424/139‑1 (MQ=255)
aCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAGc > 4:310202/1‑140 (MQ=255)
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ATTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAGC > NZ_CP022686/1640787‑1641064
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
