Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F36 I0 R1
|
107 |
8366.7 |
6299831 |
98.3% |
6192733 |
135.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,640,925 |
A→C |
18.6% |
R7S (AGA→AGC) |
ygfM → |
molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,640,925 | 0 | A | C | 18.6%
| 139.8
/ 13.4
| 103 | R7S (AGA→AGC) | ygfM | molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base A (49/33); new base C (4/17); total (53/50) |
| Fisher's exact test for biased strand distribution p-value = 1.17e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 107 total aligned reads displayed.
TTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAG > NZ_CP022686/1640788‑1641063
|
taccATTAATGCCCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTATTTCAGAGAAGAGGGTAAATTAAGGAAAGACTATGATTGAACAATTTTTCAGa < 2:143843/136‑1 (MQ=255)
ccATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCg > 7:420931/1‑140 (MQ=255)
tttCTGCGCAAGCCAGCAAAGCCGCTGCCAGAATGTGGCGTCGGAGGGATGCGCTGCCATAAAAAACAGCTCCCCTCTTCTTTCAGATAAGAGGGGAAATTAAGGAAAGACGATGATTTAACAATTTTTACGCCCCGa < 2:756190/138‑1 (MQ=255)
aTGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTg > 5:156907/1‑140 (MQ=255)
aTGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGACGGATGGATGCGATGGCATAAATAACAGCTCCCCTCTTATTTCAGAGAAGAAGTGAAATTAAGGAAAGACGAAGATAGAACAATTTTTCAGACCCTActcag > 7:442627/1‑138 (MQ=255)
gcgcAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTg > 3:456431/1‑138 (MQ=255)
cAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCg > 1:185448/1‑138 (MQ=255)
aGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAATGAAAGACGATGATTGAACAATTTTTCAGACCCGCCTCTGTCgca > 2:20039/1‑136 (MQ=255)
aGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAAGTAAGGAAAGACGATGATTGAACAATGTTTCAGACCCGACTCTGTCGat > 3:506118/1‑137 (MQ=255)
gCCAGAAAAGCCGCTGCCAGAATGAGGCGTCGGATGGATGCGCTGGCATAAATAACAGCACCCCTCTACTTTCAGAGAAGAGGGGAAAATAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGACGAACaa > 8:361139/1‑140 (MQ=255)
taaacGCCGCTGCCATTATGTGGCGGCGGATGGAGGCGCTGGCATAAATAACATCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGTAACGACGATTATTGAACAATTTTTCACACCCGACTCTGTCGAACAAgc < 4:434284/137‑1 (MQ=255)
taaacGCCGCTGCCATTATGGGGCGTCGGATGGATGCGCTGGCATAAATAACCGCTCCCCTCTTCTTTCAGAGAAGAGGGTAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAgc < 2:550082/137‑1 (MQ=255)
taaaaGCCGGTGCCAGTTTGGGGGGTCGGTTGGAGGCGCTGGAATAAATAACCGCTCCCCTCTTCTTTCAGAGAAGTGGGTAAATTAAGGAACGACGATTATTGAAAATTTTTTCTGCCCCGACTCTGTCGAACAAgc < 1:108212/137‑1 (MQ=255)
taaaaGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGTAAATTAAGGAAAGCCGATTAATGAACAATTTTTCAGACCCGACTCTGTCGAACAAgc < 4:444814/137‑1 (MQ=255)
aGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGa > 6:771346/1‑140 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAATTTAAGGAAAGACGATGATTTAAAAATTTTTCAGACACGACTATGTCGAGAAAGCGCTGGGAc > 8:175556/1‑140 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGCCTCTGTCGCACACGCGCTTGAAc > 5:676196/1‑140 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGCCTCTGTCGAACAAGCGCTGGAAc > 8:360324/1‑140 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCGTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAAc > 7:143400/1‑140 (MQ=255)
gCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAAc > 3:768688/1‑138 (MQ=255)
gCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAAc > 1:473361/1‑138 (MQ=255)
gCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTg > 7:180771/1‑140 (MQ=255)
tGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTg > 3:396070/1‑138 (MQ=255)
tgTATGTGGCGTCGGAGGGATGCGCTGGAATAAAAAACCGCTCCCCTCTTATTTCAGAGAAGAGGGGAAATTAAGTAAAGACGATGATTCAACAATTTTTCCGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAgcgc < 6:96729/139‑1 (MQ=255)
tgTATGGGGGGTCGTTTGGAGGGGCTGGAAAAAATAACAGCTCCCCTCTTATTTCAGATAAGCGGGGAAATTAAGTAACCACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAgc < 2:789012/137‑1 (MQ=255)
aGTTTGTGGCGGCGGATGTATGCGCTGCCAAAAAAAACAGCTCCCCTATTCTTTCCTAGAAGAGGGTAAATTACGGAAAGACGATTATTGAACATTTTTTCATACCCGACTCTGTCGAACAAGCGCTGGAACTGAAgc < 2:518364/138‑1 (MQ=255)
tttgtgGCGGCGGATGGATGCGCTGGAATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAgcgc < 2:185448/136‑1 (MQ=255)
tgGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCAGCTAc > 6:592290/1‑140 (MQ=255)
gggcggcGGAGGGATGCGCTGGCATAAATAACCGCGCCCCTCTTCTTTCCGCGAAGCGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCt < 2:484666/137‑1 (MQ=255)
ggCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAcc > 5:121253/1‑140 (MQ=255)
gCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc > 1:691696/1‑138 (MQ=255)
gTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCa > 4:379447/1‑138 (MQ=255)
cGGATGGATTCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACACGCGCTGGAACTTAAGCGCCGCTACCAGGAt > 6:355527/1‑140 (MQ=255)
cGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAt > 8:331902/1‑140 (MQ=255)
ggatggatGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGa > 2:12084/1‑138 (MQ=255)
gatggatgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGAAGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAt > 2:422349/1‑138 (MQ=255)
atgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAATAGTGGAAATTAAAGAAAGACGATGATTGAACAATTTTTCAGACCCTACTCTGACTAACAACCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGACg > 7:93488/1‑140 (MQ=255)
tgtcaaaaataaCAGCTCCCTTCTTCTTTCATCGAAGAGGGGAAATTAAGTACAGCCTATTATTTAACATTTTTTCACACCCGACTCTGTCTAAAAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGt < 7:616551/134‑1 (MQ=255)
tggaaaaaataaCCGCCCCCCTCTTCTTTCAGATAAGAGGGGAAATTAAGGAAAGACTATGATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTg < 2:85205/132‑1 (MQ=255)
tggaaaaaaaaaCAGCTCCCCTCTTCTTTCCGTCATGTGGGTAAATTAAGGAAATACGTTGATTGAACATTTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGt < 7:706452/134‑1 (MQ=255)
tGGAATAAATAACCGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAATGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTg < 4:727131/138‑1 (MQ=255)
ggCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 2:604261/1‑138 (MQ=255)
ggCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 2:29548/1‑138 (MQ=255)
taaataaCAGCTCCCCTTTTCTTTCACAGAAGTGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCg < 4:799444/138‑1 (MQ=255)
aaaataaCAGCGCCCGTCTTATTTCTGATTTGAGGGGAAATTAAGGAAAGCCTATTATTCAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGcc < 7:682117/139‑1 (MQ=255)
taaCAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACACGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgg > 1:810445/1‑138 (MQ=255)
aaaccccTCCCCTCTAATTTCCCCTAAGAGGGGAATTTACGCAAAGACCAGCTTTCAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGCAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgg < 2:114330/132‑1 (MQ=255)
aaaCAGCGCCCCTCTTCTTTCATACAAGAGGGTAAATAAAGTAAAGACGATTATTTAACAATTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgggg < 8:103917/139‑1 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAATAGGGGAAATTAAGGAAAGCCGATGATTTAACAATTTTTAAGACCCGACTCTGTCGAACACGCGCTGGAACTGAAGCGCCGCTCCCAGTATTATGCCGTCTGGTTCGCCGGGGgca > 8:483796/1‑140 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGCAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcg > 7:199169/1‑139 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcc > 6:541611/1‑139 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 5:77710/1‑140 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATTATTGAACAATTTTTCAGACCAGACTCTGTCGAACAAGCGCAGGAACAGAAGCGCCGCTACCAGGATGAACACTTCTGGTTCGCCGGGGgca > 1:491807/1‑138 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGaa > 1:609691/1‑80 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGaa < 2:609691/80‑1 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATAATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 4:216682/1‑138 (MQ=255)
tCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACACGACTCTGTCGACCAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAATCCGTCTGGTTCGCCGGGGgcagc > 4:647165/1‑138 (MQ=255)
ccccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa > 7:148598/1‑140 (MQ=255)
ccTCTTTATTCACATAAGTGGGTAAATTAAGGAAAGACTAGGATTTAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCGGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 7:93091/140‑1 (MQ=255)
ccTCTTCTTTCCGATAATCGGGGAAATTAAGTAACGACGATGAGTCACAAATTTTTCACCCCCGACTCTGTCGCACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 8:582701/140‑1 (MQ=255)
ccTCTTCTTTCAGTGAAGTGGGGAAATTATGGAAAGACGATCATTGAACAATTTTTCAGACCCGACGCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 4:770904/138‑1 (MQ=255)
ccTCTTCTTTCAGTAATTGGGGAAAATTAAGAAAAGACTATTTTTTAAAAATTTTTAAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 7:637507/140‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGTAAATTAAGGAACGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 1:161263/138‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCGACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa > 1:755887/1‑138 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa > 4:668893/1‑138 (MQ=255)
ccTCTTCTTTCACAGAAGCGGGTAAATTAAGTAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 6:126561/140‑1 (MQ=255)
catcttctTACCGAGAAGAGTTTAATTAAAGTAAATACTATTATTTAAAAATTTTTCTCACCCGTCTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATTAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 8:649500/138‑1 (MQ=255)
ctctTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGATCAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaacc > 4:686210/1‑136 (MQ=255)
ctctTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGACCAAGCGCTGGAACTGAAGCGCCGCGACCAGGATGAAGCCGTCCGGTTCGCCGGGGGCAGCaacc > 4:217246/1‑136 (MQ=255)
cttcttTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTc > 4:385241/1‑138 (MQ=255)
cttcttTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTATTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCCGCAACCTc > 3:160129/1‑138 (MQ=255)
tcttTCAGTGAAGAGGGTAAATTAAGGAAACACGAGGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCaa < 3:660846/138‑1 (MQ=255)
tatttCAGAGAAGAGGGGAAATTAAGGAAACAAGATCATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 8:265633/138‑1 (MQ=255)
cagctaagaGGGTAAATTATGGAAAGACGATGATTCAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTa < 1:63719/133‑1 (MQ=255)
cAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTa < 2:27549/138‑1 (MQ=255)
aagagATGTGGGTAAATATAGTAAATACGATGATTTAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTa < 4:160129/137‑1 (MQ=255)
agagAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTac > 4:5434/1‑138 (MQ=255)
agacAAGAGGGTAAATTAATGAAAGACGATGATTGAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTacac < 5:378880/140‑1 (MQ=255)
ggtaaaTTAAGTAAAGACGAGGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCg < 1:560758/135‑1 (MQ=255)
gggAAATTAAGGAATGACGATTATGTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGTAGCGCCGCTACCAGGATGAAGCAGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTa < 5:372130/140‑1 (MQ=255)
gggAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTAAACCAACCCGTa > 7:251336/1‑140 (MQ=255)
gggAAAATAAGTAAACAGGATTCTTGAAAAATTTTCGAGACCCGACTCTGTCGAACACGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTa < 5:562137/140‑1 (MQ=255)
aTTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCg > 2:66038/1‑138 (MQ=255)
aaaGACGTTGATTTAACAATTTTACCGCCCCGTCTCTGTCGAACAAGCGCTGGAACTGATCCGCCGCTACCAGGATGAAGCCGTCTGGTGCGCCGGGGGCAGCAAACTCATCGCTACACCAAACCGTACCGATaaaaata < 7:564543/140‑3 (MQ=255)
tatgttTGAAAAATTTTTCCGCCCCGACTCTGTCGAACAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGGCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCa < 5:619477/139‑1 (MQ=255)
gatgatTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGc < 4:551804/138‑1 (MQ=255)
atgatTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTGCCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCCACGCTACACCAACCCGTACCGATAAAAAGATTGCCAt > 7:276230/1‑140 (MQ=255)
aaaCAATTTTTCACACCCGACTCTGTCTAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCtt < 8:286607/139‑1 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 7:118222/1‑140 (MQ=255)
cAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 1:720873/1‑138 (MQ=255)
ataTTTTTCTGCCCCGACTCTGTCGAACAAGCGGTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGct < 5:771346/138‑2 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 4:504567/137‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCGGGAACTGAAGCGCCGCTACCATGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 3:163755/137‑1 (MQ=255)
aaaTTTTTCAGACCCGACTATGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 1:768117/137‑1 (MQ=255)
attCAGCCGCGACTCTGGCCTACACGCTCTGGATCTGAAGCGACGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 7:500147/139‑1 (MQ=255)
gACCCGACTCTGTCGAACAAGCGCTGGACCTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTgg < 4:293219/138‑1 (MQ=255)
gACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 5:635558/140‑1 (MQ=255)
caCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGTATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACAACAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTgg < 4:464090/137‑1 (MQ=255)
caCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTgg < 4:534421/137‑1 (MQ=255)
caCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 6:193609/139‑1 (MQ=255)
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TTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAG > NZ_CP022686/1640788‑1641063
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
