Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I0 R1
|
230 |
5035.0 |
9125430 |
98.4% |
8979423 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,640,925 |
A→C |
12.1% |
R7S (AGA→AGC) |
ygfM → |
molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,640,925 | 0 | A | C | 12.1%
| 265.1
/ 5.3
| 148 | R7S (AGA→AGC) | ygfM | molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base A (81/45); new base C (4/17); total (85/63) |
| Fisher's exact test for biased strand distribution p-value = 1.83e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 152 total aligned reads displayed.
ATTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAGC > NZ_CP022686/1640787‑1641064
|
aTTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGAc > 1:406428/1‑140 (MQ=255)
tgccttttATGCGCAAGCCAGAAAAGCCGATGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAACGACGATGATTGAACAATTTTTCAGAcc < 2:687749/135‑1 (MQ=255)
ttATGCGCAAGCAAGAAAAGCCGCTGCCATTATGTGGCGTCGGATGGATGCGCTGGAATAAATAACAGCTCCCCTCTTCTTTCAGATAAGAGGGTAAATTAAGGAAAGACGATGATTTAACAATTTTTCAGACCCGActc < 6:507547/140‑1 (MQ=255)
ctaGCCAGAAAAGCCGCTGGCAGTATGTGGCGTCGGAGGGATGCGCTGGCATAAATATCAGCTCCCCTCTTCTTTCAGAGAAGAGGGGATATTAAGGATAGACGATGATTGCTCAATTTTTCAGACCCTACTCTTTCaaa > 6:828049/3‑140 (MQ=255)
cAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGaa > 2:756711/1‑140 (MQ=255)
acccACAAAAGACTCTGCCATTATGTGGAGGCGTATGGATGCGCTGCCAAAAATAACAGCGCCCCTCTTATTTCATATAATAGGGGAAATTAAGGAAACACGAAGATTGAACAATTTTTCAGACCCGACTCTGTCGaa < 7:342154/136‑1 (MQ=255)
aGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAATGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGACGaa > 8:274913/1‑138 (MQ=255)
aGCCAGAAAAGCCGATGGCAGTATGTGGCGTCGGATGGATGGGGTTGCATAAATAAGAGCTCCCATCTTCTTAATGATAATAGGGTAAATTAAGGATATACGATTATTGAACAATTTTTCAGACCCGACTCTGTCGAACa < 4:196469/140‑1 (MQ=255)
ccAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGTAAATTAAGGAAAGACGATGATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAg < 4:759168/140‑1 (MQ=255)
gCCGCTGCCTGTTTGTGGCGGCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGACATGTGGGTAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGaa < 4:245791/140‑1 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGCACAAGTTTTCAGACCCGCCTCTGTCGAACACGCGCAGGacc > 3:546305/1‑138 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCAAAAATAACAGCTCCCCTCTTCTTTCAGAGAATAGGGGAAATTAAGGAAAGCCGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAAc > 2:291413/1‑140 (MQ=255)
gCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTATCAGAGAAGGGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCTACTCTGTCGAACAAGCGCTGGGACTg > 2:82941/1‑140 (MQ=255)
gCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCGTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCAGGAACTg > 3:1054234/1‑140 (MQ=255)
gcaaGTATGTGGCGTCGTATGTTTTCGCTTGAATAAATAAAAGCTCCCCTATTCTTTCAGACATGTGGGTAATTTAAGTAAACACTATGATTCAACATTTTTTAAGACCCGACTCTGTCGAACAAGCGCTGGAACTGa < 8:876062/135‑1 (MQ=255)
gCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGCCGATGATTTAACTATTTTTCCGACCCGACTCTGTCGAACAAGCGCTGGAACGGAAg > 6:959035/1‑140 (MQ=255)
gCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAg > 2:221861/1‑140 (MQ=255)
tttATGTGGCGTCGGATGGATGCGCTGGAATAAATAACAGCTCCCCTCTTCTTTCAGAGAATAGGGTAAATAAAGGAAACACGATGATTTAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAgcgc < 6:19131/138‑1 (MQ=255)
tgGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc > 4:104785/1‑140 (MQ=255)
gggCGTCGGATGGATGCGCTGGAATAAATAACAGCTCCCCTCTTATTTCAGAGAAGAGGGTAAATTAAGGAAAGACGATTATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCt < 8:521867/137‑1 (MQ=255)
gCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAATGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCa > 3:949030/1‑140 (MQ=255)
gCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCa > 2:465915/1‑140 (MQ=255)
gCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCa > 3:1082975/1‑140 (MQ=255)
gTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACATTTTTTCAGACCCGACTGTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAgg > 4:48489/1‑140 (MQ=255)
tCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTGCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGa > 5:814028/1‑140 (MQ=255)
cGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGATCTGAAGCGCCGCTACCAGGAt > 1:324647/1‑140 (MQ=255)
cGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAt > 4:921769/1‑140 (MQ=255)
cGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTAAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAt > 3:207837/1‑140 (MQ=255)
cGGATGGATGCGCTGGCATAAATAACAGCTCCCCGCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGACCACGCGCTGGCACTGAAGCGCCGCTACCAGGag > 6:654944/1‑139 (MQ=255)
atgtatgGGCTTGCATAATTAACCGCTCCCCTATTTTTTCAGATATTTGGGTAAATTAAGTAAATACTATTATTTAAAAATTTTTCATCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATg < 7:434036/138‑1 (MQ=255)
atgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTCCCAGGATGAAGCCg > 4:104099/1‑140 (MQ=255)
tgCGTTGGAATAAATAACTGCTCCCCTCTTATTTCAGATAAGTGGTGAAATTAAGGAAAGACTTTTATTGAAAATTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGt < 1:247425/140‑1 (MQ=255)
cTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 1:126560/1‑140 (MQ=255)
taaCAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGTAAGACGATGATTGAACAATATTTAAGACCCGACTCTGTCGATCTAGCGCTGTAGCTGAAGCACCGCTACCAGGATGAAGCCGTCTGGTTCGCCgg > 8:529475/1‑138 (MQ=255)
taaCAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACACGCGCTGTAACTGACGCGCCGCTACAAGGATGCAGCCGTCTGGGTCGCCgg > 7:915648/1‑138 (MQ=255)
aaaCAGCTCCCCTCTTATTTCACAGAAGCGGGGAAATAAAGTAAACACCATGTTTCAAAAATTTTCCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgggg < 5:765985/139‑1 (MQ=255)
aaaCAGCCCCCCTCTTCTTTCAGAGAAGAGGGTAAATTAAGTAAACACTATTATTTAACATTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgggg < 6:696211/139‑1 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 3:877655/1‑140 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGCAGCCGTCTGGTTCGCCGGGGgca > 1:428698/1‑140 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcc > 5:537914/1‑139 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcc > 5:554817/1‑139 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAAATTTTCAGACCCGACTCTGTCGAACAAGCGCTGGCACAGAAGCGCCGCTAACAGGATGAAGCCGTCTGTTTCGCCGGGGgca > 1:697042/1‑140 (MQ=255)
cAGCTCCCCTCTTCTGTCAGAGAAGAGGGGAATTTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTTTCGAACTAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCggggtcg > 4:998910/1‑137 (MQ=255)
gCTCCCCTCTTCTTTCAGAGATGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGATCAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcg > 7:520308/1‑137 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCAGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 7:679209/1‑138 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCAGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAGGAAGCCGTCTGGTTCGCCGGGGgcc > 8:543039/1‑137 (MQ=255)
gCTCCCCTCTTCGTTCAGAGAAGAGGGGAAATTAAGGATAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcc > 7:1005472/1‑137 (MQ=255)
ccTCCCCTCTTCTTTCCCACAAGTGGGTAAATTAAGGAACCACGATGATTCAACAATTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagc < 3:374131/139‑1 (MQ=255)
ccccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGACGCCGTCTGGTTCGCCGGGGGCAGCaaa > 4:749158/1‑140 (MQ=255)
ccccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa > 3:1116391/1‑140 (MQ=255)
cccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc > 2:1133082/1‑140 (MQ=255)
ccTCTTTTTTCTGATCTGAGGGTAATTTACGTAAAGACGTTGATTTAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 7:419187/138‑1 (MQ=255)
ccTCTTCTTTCCGAGATGAGGTTAAAATAAGGAACGCCGATGATTGAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 7:365823/138‑1 (MQ=255)
ccTCTTCTTTCATTTAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 6:537498/140‑1 (MQ=255)
ccTCTTCTTTCATAGAAGAGGGGAAATTAAGGAACTCCGATTTTTGAACATTTTTACAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGGCTGGTTCGCCGGGGGCAGCAAACt < 4:815265/140‑1 (MQ=255)
ccTCTTCTTTCAGAGACGTGGGTAAATTAAGGAAAGACTATGATTCAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 2:429783/140‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 2:627357/140‑1 (MQ=255)
ccTCTTCTTTCAGACAATTGGGTAAATTAAGGAAAGACTATTATTGAACAATTTTACAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 6:29752/140‑1 (MQ=255)
ccTCTTCTTTCACAGAAGAGGGTAAATAAAGGAACGACGATTATTTAACAATTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 6:1047838/140‑1 (MQ=255)
ccTCTGCTTACAGAGAATCGGGGAAATAAAGGAAAGACCATGATTGAACAATTTTTCCGCCCCGACTCTGTCGAACAAGCGCTGGACCTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 5:469201/140‑1 (MQ=255)
ctctTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTc > 3:245372/1‑140 (MQ=255)
tcttTCATAGAAGAGGGTAAATTAAGGAAAGCCGATGATTGAACAATTTTTCATCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCaa < 7:919394/138‑1 (MQ=255)
tcttTCAGAGAAGAGGGTAAATAAAGCAAACACCATTATTCAACAATTTTCCCGCCCCGACTCTGTCGAACAAGCGCTGGACCTGACGCGCCGCTACCAGGATGACGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 3:406631/140‑1 (MQ=255)
tcttTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTTAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCaa < 8:775544/138‑1 (MQ=255)
tCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGCACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAACCTCAACGCTac > 6:301421/1‑140 (MQ=255)
aagatAAGAGGGGAAATTAAGGAAAGACTATTATTGAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCAGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTaca < 3:146764/139‑1 (MQ=255)
gagGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGAATCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAACAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACGCACCTCTACAGCTAccc > 6:905036/1‑140 (MQ=255)
gagGGGAAAGTAAGGAAAGCCGATGATTGAACAATTTTTCCGCCCCGCCTCTGTCGAACAAGCGCTGGAACTGCAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAACCTCAACGCTCCCCCAAccc > 6:905037/1‑140 (MQ=255)
gggAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGCACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCACCCCg > 7:621976/1‑138 (MQ=255)
ggcaaaTAAAGCATAGACGCTGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACACCCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCg < 7:124270/135‑1 (MQ=255)
aTTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGAt > 2:206447/1‑140 (MQ=255)
aTTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCGACACCAACCCGGACCGAt > 4:887429/1‑140 (MQ=255)
tAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTCCCAGGATGAAGCCGACTGGTTCGCCGGCGGCAGCAAACTCACCGCTCCCCCAACCCGTACCGAt > 8:543379/1‑138 (MQ=255)
ggAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAATCTCAACGCTACACCAACCCGTACCGATaaaaa > 5:340265/1‑140 (MQ=255)
ggAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATaaaaa > 3:764284/1‑140 (MQ=255)
aaaGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGTGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGa < 4:406785/140‑1 (MQ=255)
aGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGAtt > 4:309422/1‑140 (MQ=255)
aGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCAGAAACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGAAATCTCAACGCTACACAAACCCGTACCGATAAAAAGAtt > 3:729800/1‑140 (MQ=255)
cGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGAttt > 8:280032/1‑137 (MQ=255)
catgatTGAACAATTTTTCAGCCCCGACTCTGTCGAACACGCGCGGGAACTGAACCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCa < 1:623184/139‑1 (MQ=255)
tttatTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCAt < 2:406428/137‑1 (MQ=255)
atgatTGAACAATTTTTCAGACCCGACTCTGTCGCACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCAt > 5:1075135/1‑140 (MQ=255)
atTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTc > 1:606114/1‑140 (MQ=255)
ttGAAACATTTTTCAGACCCGACTCTGGCGAACAAGCGCTGGAACTGACTCGCCGCGACCAGGATGAATCCGTATGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACACGTACCGATAAAAAGATTGCCATTTcc < 4:810880/140‑1 (MQ=255)
tGAAAAATTTTTCAAGCGCGACTCTGTCGAACATGCGAGGGAACTGAAGCGGCGCTACCATGATGAAGCCGTCTGGTTCGCCGGGGTGAGCAAACTCAACGCTACACCAACCAGTAACTATAAAAAGATTGAAAATTCCt < 2:122834/140‑1 (MQ=255)
aaCAATTTTTCAGACACGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCTCCGGGGGCAGCAAACGCAACGCAAGACCCCCCCGTACCGATAAAAAGATTGCCAATTCCTTg > 2:624069/1‑140 (MQ=255)
cAATTTTTCCCCCCCGACTCTGTCGAACTCGGGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 3:30022/140‑1 (MQ=255)
cAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 7:266934/1‑138 (MQ=255)
cAATTTATCACCCCAGACTCTGGCGAACACGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 5:188339/140‑1 (MQ=255)
aaaTTTTTGAGACCCGACTCTGTCGAACAAGCGCTGGAAATGAAGCGCCGCTAACAGGATGAAGCAGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 3:496290/139‑1 (MQ=255)
aaaTTTTTCAGCCCCGACTCTGTCGAACAAGCGCGGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 2:847520/139‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 3:1012544/139‑1 (MQ=255)
tttcccaCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCAGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 5:254716/134‑1 (MQ=255)
tttCTGACCGGTCTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACCCCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGa < 7:662636/138‑1 (MQ=255)
tttCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 1:1088228/140‑1 (MQ=255)
tttAAGACCGGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCATCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 4:1152045/140‑1 (MQ=255)
ttgcAGACACGACTCAGTCGAACAAGCGCTGGAACTTAAGCGCCGCTACGAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 4:593762/137‑1 (MQ=255)
gACCCGACTCTGTCGACCAAGCGCGGGAAGTGACGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTTCCATTTCCTTGCAGGATCTGGAg < 2:878511/140‑1 (MQ=255)
aaCCAGACTCTGTCGAACAACCGCTGCTACTGAAGCGCCGCTACCAGGATGAAGCCGGATGGATCGCCGTGGGCAGCAAACTCAAAGCTTCACCAACCCGTACCGAAAAAAAGACTTCCATTTCCTAGCATGATCTgt < 8:66090/137‑2 (MQ=255)
aCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAGc > 1:868209/1‑140 (MQ=255)
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ATTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAGC > NZ_CP022686/1640787‑1641064
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
