Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,640,925 |
A→C |
13.0% |
R7S (AGA→AGC) |
ygfM → |
molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,640,925 | 0 | A | C | 13.0%
| 241.2
/ 7.4
| 150 | R7S (AGA→AGC) | ygfM | molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base A (70/56); new base C (2/21); total (72/78) |
| Fisher's exact test for biased strand distribution p-value = 2.15e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 157 total aligned reads displayed.
ATTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAG > NZ_CP022686/1640787‑1641063
|
aTTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGAc > 8:1224524/1‑140 (MQ=255)
cATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGTAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGa < 1:728757/140‑1 (MQ=255)
cATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGa < 8:1136351/140‑1 (MQ=255)
aaTTTATGCGCAAGCAAGAAACCCCGCGGCCAGTATGTGGGGTGGGAGGGAGGCGGTGGCATAAATAACAGCGCCCCGCTTCTTTCAGAGATGTGGGGAAATTAAGTAAAGACGATGATTGAACAATTTTTCAGCCCCGa < 1:1252858/139‑1 (MQ=255)
cAAGCCAGAAACGCCGCTGCCAGTATGTGGCGTCTGATGGATGCGCTGGCATAAATAACCGCTCCCCTCTTCTTTGAGAGAAGAGGTGAAATTAAGGAAAGGCGATGCTTGAACAAGTTTTCAGACCCGACTCTGTctcc > 8:1018624/1‑137 (MQ=255)
cgCCAGAAAAGCCGCTGACAGTATGTGGAGTCGGATGGATGCTCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAACGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGaa < 4:107148/137‑1 (MQ=255)
taaacGCCGCTGCCAGTATGGGGGGTGGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAgcgc < 2:312478/139‑1 (MQ=255)
taaaaGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTATGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAgcgc < 2:519185/139‑1 (MQ=255)
gAAAAGCCTCTTTCAGTATGTGGCGGAGTTTGTATGCTTGTGAATAATAAACAGCTGCAGTTTTTTTTCAGAGACGAGGGGAAATTAAGTAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAgcgc < 6:1040273/140‑1 (MQ=255)
ccGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGATGAGGGGAAATTAAGGAAAGACGAAGAATTAACAATTATTCAGACCCGACTCTGTCGAACAAGAGATGTAAc > 1:349247/1‑140 (MQ=255)
gCCAGTATGTGGCGTCGTATGTATGCGCTGTCATAAATAACAGCTCCCCTCTTATTTCAGAGAAGAGGGGAAATTAAGGAAACACGATTATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAg < 8:1065198/140‑1 (MQ=255)
tATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGcgccg > 8:351978/1‑140 (MQ=255)
tgGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc > 5:380101/1‑140 (MQ=255)
gggCGTCGTTTGGAGGCGCTGTCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGTAAATTACGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc < 1:502798/139‑1 (MQ=255)
gggCGTCGTATGGATGAGATGGCATAAATACCAGCTCACCTCTGATTTCAGCTAAGAGGGTAAATTAAGGAAAGAAGATCATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCt < 4:933699/137‑1 (MQ=255)
gggCGTCGTAGGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc < 2:831844/139‑1 (MQ=255)
gCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCTCACAAGCGCTGGAACTGAAGCGCCGCAAc > 3:1282915/1‑138 (MQ=255)
gCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCa > 8:28030/1‑140 (MQ=255)
gCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCa > 1:1006926/1‑140 (MQ=255)
gCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCATTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc > 4:649773/1‑138 (MQ=255)
cGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGAACCGACTCTGTCGAACCAGCGCTGGAACTGAAGCGCCGCTACCAg > 7:90677/1‑140 (MQ=255)
cGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGCGAAGCGGGGAAATTAAGGAAAGCCGATGATTTCCCAAATTTTCAGACCCGACTCTGTCGAACACGCGCTGGAACTGCAGCGCCGCTACCAGCAt > 7:288148/1‑140 (MQ=255)
cGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATAGAACAATTTTTCAGACCCGACTCTGTCGTACAAGCCCAGGACCTGAAGCGCAGCTAACACGAt > 6:781232/1‑140 (MQ=255)
gatggatgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACACGCGCTGGAACTGCAGCGCCGCTCCCTGGAt > 3:861580/1‑138 (MQ=255)
tgggatgCGTTGTAATAAATAACCGCACCCCTATTATTTCATCTAATTGGGTAAATTAAGAAAACACTATGATTAAAAAATTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGaa < 5:480758/138‑1 (MQ=255)
tggatgCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAAAAATTTTTCAGACACGACTCTGTCGAACAAGCGCTGGATCTGAAGCGCCGCTACCAGGCTGa > 4:98535/1‑138 (MQ=255)
tggatgCGCTGGAAAAAATAAAAGCTCCCATCTTATTTCAGATAAGTGGGGAAATTAAGTAACGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAg < 6:891487/140‑1 (MQ=255)
cTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGCCTCTGTCGAACACGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 2:317758/1‑140 (MQ=255)
cTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACACGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 2:745263/1‑140 (MQ=255)
tgctataaatacCAGTCCCCCTCTTCTTTCCGAGATGAGGGTAATTTTTGGTCAGACTATGATTCAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGACGCGCCGCTACCAGGATGAAGCCGTCTGGt < 8:731325/136‑1 (MQ=255)
tGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGt > 1:1190837/1‑140 (MQ=255)
gCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGATATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAGGCCGTCTggg > 3:1248181/1‑137 (MQ=255)
cATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCg > 6:431884/1‑140 (MQ=255)
aaataaCAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCg > 8:1093289/1‑140 (MQ=255)
taaCAGCACCCCTCTTATTTCCTATATTTGGGTAAATAAAGCAAAGACTATGATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgg < 3:659408/138‑1 (MQ=255)
aaaCAGCTCCCATCTGCTTTCATATAAGAGGGTAAATTAAGGAAACACTATCATTGAACAATTTTTCCGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgggg < 6:793699/139‑1 (MQ=255)
aCAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGACGCCTTCTGGTTCGCCgggg > 3:406162/1‑138 (MQ=255)
cAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 7:1193220/1‑140 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTCCCAGGATGAAGCCGTCTGGTTCGCCGGGGgcg > 3:77008/1‑137 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 3:46511/1‑138 (MQ=255)
ccgccccTCTTCTTTCAGAGAATAGGGTAAATTACGGAAAGACCATTATTGAACAATTTTTCAGACCCGACTCTGTCGAACACGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagc < 8:1216066/137‑1 (MQ=255)
ccaccccTCTTATTACAGAGAAGAGGGTAATTTAAGGAACGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca < 3:155968/135‑1 (MQ=255)
cTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGCACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagca > 1:1011421/1‑140 (MQ=255)
cTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc > 7:4935/1‑106 (MQ=255)
cTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTAc < 8:4935/106‑1 (MQ=255)
ccccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGCACAAGCGCTGGAACTGAAGCGCAGCTACCAGGATGAAGCCGTCTGGTTCTCCGGGGGCAGCaaa > 5:1309504/1‑140 (MQ=255)
ccccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa > 1:170993/1‑140 (MQ=255)
ccccTATTCTTTCTGAGAAGAGGGTAAATTAAGGAAAGACGATGTTTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 5:987191/140‑1 (MQ=255)
cttcttttTTCAGCTAAGTGGGTAATTTAAGGAAAGCCGTTTATTTAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 4:12931/136‑1 (MQ=255)
cgtcttttTTCAGATAAGTGGGTAAATTAAGGATAGACGATGATTCAAAAATTTTACACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 6:848163/138‑1 (MQ=255)
ccgattcttTCAGTCAATGGGGGAAATTATGCAAAGACGATGTTTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 3:914923/134‑1 (MQ=255)
ccTTTTCTTTCAGAGAACTGGGTAATTTAAGGAATTCCGATGTTTGAAAAATTTTTACGCCCGGAGTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 5:764413/140‑1 (MQ=255)
ccTCTTCTTTCCGAGATGAGGGTAAATTAAGGAAACACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGACCTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 7:442627/140‑1 (MQ=255)
ccTCTTCTTTCAGATATGAGGGTAATTTAAGCAAAGACGATGATTGAACAATTTTTCTCACCCGACTCTGGCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 6:675416/140‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGTAAATTAAGGAAAGACGATCATTCAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 2:7642/140‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGTAAATTAAGGAAAGACCATGATTCAAAAATTTTTCACCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 2:11889/140‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGTAAATTAAGCAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 6:179274/140‑1 (MQ=255)
ccTCTTCTTTCAGACAGTTGGGTAAATAAAGGAAAGACTATGATTGAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 3:262532/138‑1 (MQ=255)
ccTCTTCTTTCAGACAAGAGGGTAAATTAACCAAAGACGATGATTTAAAAATTTTACTCACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 7:939744/140‑1 (MQ=255)
ccTATTCTTACAGACAAGAGGGTAAATAAAGGAAAGCCGATGATTCAACAATTTTACAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 7:1224524/140‑1 (MQ=255)
ctctTGTTTCAGAGAAGAGGGGAAATTAATGAAAGAAGATGAATGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc > 4:1229776/1‑138 (MQ=255)
ctctTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTc > 8:634724/1‑140 (MQ=255)
tcttTCCGAGAAGATGGGAAATTAAGGAAAGACTATGATTTAAGAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCaa < 4:765750/138‑1 (MQ=255)
cttTAAGAGAAGAGGGGAAATTAAGTAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGTCACTGCAGAGCCTCTACCAGGATGAAGCCTTCTGGTTAGCAGGTGGCAGAAAACTCaag > 4:505257/1‑137 (MQ=255)
tCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTac > 8:781191/1‑140 (MQ=255)
cAGATAAGAGGGTAAATTAAGTAAACACGATTATTTAAAAATTTTTCAGACCCGACTCTGTCGATCAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTaca < 2:1233430/140‑1 (MQ=255)
cAGAGACGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTaca < 2:1096919/140‑1 (MQ=255)
gaagaGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACAcc > 4:270693/1‑138 (MQ=255)
ggggtAATTTAAGTAATGACTATGATTGAAAATTTTTTCAGACCCGACTCTGTCGAACTAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCTGGGGAAGCAAACTCAACGCTACACCAACCCg < 8:598615/139‑1 (MQ=255)
agGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAAcc > 4:1071873/1‑138 (MQ=255)
gAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCACCCCGGAcc > 6:1105494/1‑140 (MQ=255)
aTTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCg > 4:1339292/1‑138 (MQ=255)
aaGGAAAGACTATGATTGAACAATTTTTCAGACCCGACTCTGTCGATCAAGCGATGTAACTGAAGCGCCGCTACCAGGATGACGCCGTCGGGTTCGACGGGGGCAGCAAACTCAAAGGAACACAAAACCGTACCGATata > 2:1294426/1‑138 (MQ=255)
taaaCACGATGTTTTAACATTTTTACAGCCCCGACTCTGTCGAACAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATatatag < 6:1253182/139‑6 (MQ=255)
gAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAg > 8:1046559/1‑140 (MQ=255)
gatgttTTAATACTTTTTCAGACCCGCGGCTGTCGACCAAGCGCTGGAACTGACGCGCCGCGACCAGGATGAAGCCGTCTGGGTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAACAGATTGCCa < 8:502811/140‑1 (MQ=255)
catgatTGAACATTTTTTCCGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCa < 6:942071/139‑1 (MQ=255)
tGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTc > 4:750429/1‑138 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCTCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 2:599461/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCATCCCGTACCGATAAAAAGATTGCCATTTCCTTg > 6:913326/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 7:196785/1‑140 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 8:852475/1‑140 (MQ=255)
cAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa > 6:562116/1‑140 (MQ=255)
cAATTTTTCACACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAGGAAGCCGTCTGGTGCGCCGGTGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 4:536199/138‑1 (MQ=255)
cAATTTTGCAGCCCCGCCTCTTGCGAACAAGCCCTGGACCCGACGCGCCGCTACCCGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 7:207664/140‑1 (MQ=255)
aatttttaCAGACCCGACTCTGTCGAACAAGCGCTGGGACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 6:712024/137‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 3:213598/137‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 4:793429/137‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 3:1339292/137‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 5:468135/139‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAAGCGATGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 5:662199/139‑1 (MQ=255)
aaaTTTTTCAGACCCGACTCTGTCGAACAACCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 1:37516/139‑1 (MQ=255)
aaaTTTTTCAGACACGAATCTGAAGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 3:724353/137‑1 (MQ=255)
aaaTTTTTCACCCCCGACTCTGTCGACCAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 1:686531/139‑1 (MQ=255)
aaaTTTTACAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCa < 7:1060980/139‑1 (MQ=255)
aaTTTTTCAGACCCGACTCTGTCGAACAAGCGCGGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAg < 1:1343527/140‑1 (MQ=255)
tttCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 8:162166/140‑1 (MQ=255)
gACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTgg < 4:151980/138‑1 (MQ=255)
caCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTgg < 3:494354/137‑1 (MQ=255)
caCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAg < 2:1024836/139‑1 (MQ=255)
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ATTCCATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAG > NZ_CP022686/1640787‑1641063
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
