Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A26 F12 I0 R1
|
131 |
9881.0 |
7547414 |
98.3% |
7419107 |
134.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,716,167 |
A→C |
9.5% |
N49T (AAC→ACC) |
rdgB → |
XTP/dITP diphosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,716,167 | 0 | A | C | 9.5%
| 321.9
/ 4.9
| 165 | N49T (AAC→ACC) | rdgB | XTP/dITP diphosphatase |
| Reads supporting (aligned to +/- strand): ref base A (83/61); new base C (2/18); total (85/80) |
| Fisher's exact test for biased strand distribution p-value = 5.79e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 173 total aligned reads displayed.
AGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGA > NZ_CP022686/1716030‑1716305
|
aGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGCCCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGaaaa > 2:358928/1‑138 (MQ=255)
ttGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGGAGAGTCCGCTGCAGAAACCGGCCTGACCTTTATCGAACAcg > 6:119187/1‑138 (MQ=255)
tCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAATCCGGCCTGACCTTTATCGAAAACGCGa > 7:674270/1‑138 (MQ=255)
tCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGa > 6:425601/1‑138 (MQ=255)
tCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGa > 1:959606/1‑138 (MQ=255)
cTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGCAGAATCCGGCCTGCCCTTTATCGAAAACGCGAtt > 1:478570/1‑138 (MQ=255)
aaTGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAgcgcgc < 1:445472/138‑1 (MQ=255)
aaTGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATACCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAgcgcgc < 6:761375/138‑1 (MQ=255)
aaTGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTGCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAgcgcgc < 5:48117/138‑1 (MQ=255)
aaTGCCGGTAAAGGGCGTGAGCTGGCGGCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAACCAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCa < 3:57308/140‑1 (MQ=255)
tAAAGTGCGTGAGCTGGCTTCGCTGCTTAGCTACTTCGGTCTTGATATCGTGGCCAAAACAGACCTCGGCGTAGAATCCGCTGAAGAAACCGGCCTGACCTTTATCTAAAACGCGATTCTGAAAGCGCGCCATGCGGCaa < 4:600903/140‑1 (MQ=255)
aaaGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCa > 6:854903/1‑138 (MQ=255)
gTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATAGAAAACGCGATTCTGAAAGAGCGCCATGCGGCaaaa > 7:20344/1‑138 (MQ=255)
gttGAGGTGGCGTCGCTTCTGTGCTACTTCGGTCTTGATATGGTGGCCCAAACAGAACTCGTCCAAGATTTCGCTGAATAAACCGGCCTCACCTTTATCGAAAACTCGATTCTGAAAGCGCGCCATGCGGCAAAAGTg < 6:354555/136‑1 (MQ=255)
ctttcgCTGGCGTCGCTGCTTAGCGACTTCGTTCTTTATATCTTGCCCCAAACAGACCTCGGCGGAGATTCCGCTGTAGAAACCGGCCTGACCTTTTTCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAACAGTg < 8:707490/133‑1 (MQ=255)
cGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTg < 8:243434/138‑1 (MQ=255)
cGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGAc > 4:794082/1‑140 (MQ=255)
cGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCGGAAAGCGCGCCATGCGGCAAAAGTGAc > 3:839607/1‑140 (MQ=255)
gTGAGCTGGCGGCGCTGCTTAGCGACTTCGGTCTTTATATCGTGGCCCAAACAGACCTCTGCGTAGATTCCTCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGa < 2:542714/138‑1 (MQ=255)
tGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACATCCCTCGGCGTACAATCCGCAGAACAAACAGGCCTGACCTTTATCCAAAACGCGATACTGAAAGCCCGCCAAGCCGCAAAAGTGAc > 5:29348/1‑138 (MQ=255)
tGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCg > 3:331525/1‑140 (MQ=255)
tGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCg > 3:131550/1‑140 (MQ=255)
tGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGAATCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGAATCAGAAAGCGCGCCATGCGGCAAAAGAGAc > 5:874827/1‑138 (MQ=255)
gAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCTGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGAcc < 5:397920/138‑1 (MQ=255)
ggCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTAc > 4:71377/1‑140 (MQ=255)
cGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACCGACCTCGGCGTAGATTACGCTGAAGAAACCGGCCTGCCCTTTATCGAAAAAGCGATTATGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTAc > 5:344400/1‑138 (MQ=255)
cGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCTGCCGGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGCCCGGTTTAc > 7:892385/1‑138 (MQ=255)
cGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGCCCGGTTTACCg > 4:465075/1‑140 (MQ=255)
cGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTAc > 5:748681/1‑138 (MQ=255)
tCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCACAAACAGACCACGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCg > 8:28103/1‑138 (MQ=255)
gcGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGc < 4:280938/139‑1 (MQ=255)
tAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAAAGCGATTCTGCAAGCCCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCcg > 4:275367/1‑140 (MQ=255)
gCGACTTCGGTCTTGATATCGTGGCCCAATCAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTAGCGAACACGCGATTATGAAAGCGCGCCATGCGGCAAGATTGACCGGTTTACCGGCAATTGCcg > 2:87662/1‑138 (MQ=255)
tCGGTCTTGATATCGTTGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCTAAAACGCGATTCTGAAATCGCGCCATGCGGCAAAAGTCAACGGTTTACAGTCAATTGAAGACGAATcc > 4:328074/1‑140 (MQ=255)
tCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTcc > 3:502307/1‑140 (MQ=255)
tCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGAGATTCTGAAAGCGCGCCATGAGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTcc > 4:386815/1‑140 (MQ=255)
ggTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACAGGCAATTGCCGACGACTcc > 1:890287/1‑138 (MQ=255)
ggTCTTGATATCGTGGCCCAAACAGAACTCGGCGTAGATTCCGCTGAAGACACCGGCCTGACCTTTATCGAAAACGCGCTTCTGAAATCGCGCCCTGCTGCAAAAGTGACCGGTTTACCGGCAATTGCCGCCGACTcc > 6:154102/1‑138 (MQ=255)
atCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCg > 1:811764/1‑138 (MQ=255)
tGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAg > 8:678386/1‑138 (MQ=255)
gggCCCAACCAGACCTCGGCGTAGATGCCGCTGAAGAAACCGCCGTGACCTTAATCGAAAACGCGATGCTGAACGCGCGCCATGCGGCAAAAGTCACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAg < 6:568029/137‑1 (MQ=255)
gggCCCAACCACACCTCGGCGTATATCCCGCTCAAGAAACCGGCCTGACATTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAg < 7:719734/137‑1 (MQ=255)
gcgCCCAAACAGTCCTCGCCGTAGATTCCGGTGAAGAACCCGGCCTGACCTTAATCTAAAACGCGATTCTGAAAGCGCGCCAAGCGGCAAAAGTGACCGGTTTACCGGCAATTTCCGACGACTCCGGTCTGGCGGTAg < 6:790799/136‑1 (MQ=255)
ggCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGa > 2:316025/1‑138 (MQ=255)
ggCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGa > 8:756197/1‑138 (MQ=255)
cccAAACAGCCCTCGGCGTAGATGCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATg < 2:177167/138‑1 (MQ=255)
cccAAACAGACCTCGGCGTCTATTCCGCTGACGAACCCGGCCTGACCTTTATCTAAAACGCGATTCTGAAAGCGCGCCATGCGGAAAATGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATg < 1:975363/138‑1 (MQ=255)
cccAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATg < 8:601445/138‑1 (MQ=255)
aGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTggg > 5:189338/1‑138 (MQ=255)
ccTCGGCGTAGATTCCGCTGAAGAAACCTGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcg > 3:211318/1‑140 (MQ=255)
cTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGCCCTTTATCGAAAACGCGATTCTGAAAGCGCTCCATGCGGCAATAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgc > 1:135248/1‑138 (MQ=255)
cTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGCCGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgc > 8:452725/1‑138 (MQ=255)
cTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGTTCTGGCGGTAGATGCGCTGGGTGgc > 5:119050/1‑138 (MQ=255)
cTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgc > 7:14823/1‑138 (MQ=255)
cTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGCTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgc > 5:698873/1‑138 (MQ=255)
gggCGTCTATTCCGCTGAAGAAACCGGCCTGACGTTTATCGAAAACGCTTTTCTGAACGCGCGCCATGCGGCAAATGTGACCGGTTTACCGGAAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgc < 6:501656/137‑1 (MQ=255)
gggCGTAGATACCGCTGACGAAACCGGCCTGCCCTTTATCCAAAACGCGATTCTGAAACCGCGCCATGCGGAAAAAGTGCCCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgc < 1:913926/137‑1 (MQ=255)
cgccGTAGATTCCGCGGAAGAACCCGGCCTGACCTTTCTCTACAACGCGATGCTGAACGCGCGCCAGGCGGCAAACGTGACCGTTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgc < 6:455839/135‑1 (MQ=255)
cGGCGTAGATCCCGCTGAAGAAACCGGCCTGCCCTTTAGCCAAAACGCTATTCTGAAAGCGCGCCATGCGGCAAACGTGCCCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGGGgcgc < 2:57862/138‑1 (MQ=255)
gcttataTTCCGCTGAAGAACCCGGCATCACCTTAATCCAAAACGCGATTCTGAAAGCGCGCCAGGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 6:270980/132‑1 (MQ=255)
gCGTTGATTCCGCTGAAGAAACCGGCCTCACTTTTATCGAAATCGCGTTTCTTAAAGCGCGCCAGGCGCCAAATGGGCCCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 6:392135/138‑1 (MQ=255)
gCGTAGATTCCGCTGAAGAACCCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCAGGCGTCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 6:746108/138‑1 (MQ=255)
gCGTAGATGCCGCTTACGAAACCGGCCTCACCTTTATCGAAACCGCGATTCTGAACGCGCGCCATGCGGCAAAAGTGCCCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 7:664637/138‑1 (MQ=255)
gCGTAGATCCCGCTGAATAAACCCGCCTTACATTTATATAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 5:841304/138‑1 (MQ=255)
gCGTAGATCCCCCTCAATAAACCGCCGTGCCATTTAGCTAAACCGCGATACTGAACGAGCGCCATGCGGCAAAAGGGACCTGTTTACCGGAAATTGCCCACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 6:253660/138‑1 (MQ=255)
cGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCTCCGACTCCGCTCTGGCGGTAGATGCGCTGGGTGGCGCGcc > 7:877809/1‑138 (MQ=255)
aGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTa > 4:238860/1‑140 (MQ=255)
atcccGCTGACGAACCCGGCCGCACGTTTATCGAAAACGCGATTCTGAACCCGCGCCATGCGGCAAAAGTGCCCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTa < 2:919900/135‑1 (MQ=255)
aTTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTa > 5:264366/1‑138 (MQ=255)
aTTCCGCTGAAGAAACCGGCCTGACCTTTATAGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGCCCGGTTTAACGGCAATAGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTa > 8:813347/1‑138 (MQ=255)
cGCTGAACAACCCGCCCTCACCTTTATCGAAACCGCGATTCTGAAAGCGCGCCAGGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTa < 5:425601/138‑1 (MQ=255)
gCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGCCGACTCCGGTCTGGCGGTCGATGCGCTGGGGGGCGCGCCGGGTATTTACTc > 3:700261/1‑140 (MQ=255)
gCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACTACTCCGCTCTGGCGGTAGATGCGCTGGGTCGAGCGCCGGGTAtttcc > 8:168544/1‑136 (MQ=255)
gCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGCCTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTAc > 2:691249/1‑138 (MQ=255)
ctcaacaaaCCCCCCTCACCTTAATCTAAAACCCGAGCCTCAAAGCGCGCCATGCGCCAAAAGTCACCGGTTTACCGGCAATTGCCGACGACTCCGGGCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACt < 5:130257/132‑1 (MQ=255)
cggacgaaACCGGCCTGACCTTTATCGAAACCGCGATTCTGAACGCGCGCCATGCGGCAAAAGTGCCCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACt < 1:285365/133‑1 (MQ=255)
cTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGt < 2:933179/71‑1 (MQ=255)
cTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTTTTTACt > 7:798025/1‑138 (MQ=255)
cTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACt > 8:438903/1‑138 (MQ=255)
tGAAGAATCCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTc > 7:448522/1‑138 (MQ=255)
aagaaCCCGGCCTCCCCTTTATCCAACACGCGTTTCTGAAAGCGCGCCATGGGGCAAAAGGGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCcg < 1:670306/138‑1 (MQ=255)
gaaACCGGCCTGCCCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCcgcc > 7:663705/1‑137 (MQ=255)
ccgggCCTGACCTTTATCTAAAACGCGATTGTGAAAGCGCGCAATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGt < 7:509531/135‑1 (MQ=255)
cccGCCCTGACCTTTATCGAAACCGCGATTCTGAACGCGCGCCATCCGGCAAAAGTGACCGGTTAACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGt < 8:138389/137‑1 (MQ=255)
cGGCCTGACCCTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGCTGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTa > 1:958391/1‑138 (MQ=255)
ggCCTTACCTTTATCCAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAATGTGACGGTTTTACCGGAAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTAt < 6:468745/138‑1 (MQ=255)
ggCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTc < 3:255802/140‑1 (MQ=255)
ggCCTGACCTTAATCGAACACGCGATTCTTAACCCGCGCCATGCGCCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGGGGCGCGCCGGGTATTTACTCCGCGCGTTAt < 8:893983/138‑1 (MQ=255)
gcccTCACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTAt < 2:500813/136‑1 (MQ=255)
tGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGAATTTACTCCGCGCGTTATTCCg > 7:36192/1‑138 (MQ=255)
tGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGAGACCTGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCg > 1:817905/1‑138 (MQ=255)
ggACCTTCATCGACACCGCGATTATGAACGCGCGCCATGCGGCAAACGTGCCCGGTTTACCGGCAAGTGCCGACGACTCCGGGCTGGCGGTAGATGCGCGGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCg < 2:20110/137‑1 (MQ=255)
aTCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGAcgc > 3:30407/1‑140 (MQ=255)
tCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc > 1:552146/1‑102 (MQ=255)
tCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGAcg > 1:103706/1‑138 (MQ=255)
tCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGAGCTGGGTGGCGCGCAGGGTATTTACTCAGCGCGTTATTCCGGTGAAGAcg > 6:157658/1‑138 (MQ=255)
ctaaaaCGCGATTCTGAACGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGAcgc < 2:900647/136‑1 (MQ=255)
cGAAACCGCTTTTCTGAACGCGCGCCTGGCGGCAAACGGGCGCGGTTTACCGGCAATTGCGGACGACTCCGGGCTGGCGGTAGATGCGCGGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGAcgc < 2:837863/138‑1 (MQ=255)
cGAAACCGCGATTCTGAAAGCGCGCCATGCGGAAAAAGTGACCGGTTTACCGGAAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGAcgc < 7:316860/138‑1 (MQ=255)
cGAAAACGCGATTCTGAACGCGCGCCATGCGGCAAAAGTGAGCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGAcgc < 8:267933/138‑1 (MQ=255)
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AGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGA > NZ_CP022686/1716030‑1716305
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
