Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A30 F36 I0 R1
|
275 |
10897.2 |
10515506 |
98.4% |
10347257 |
135.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,716,167 |
A→C |
10.1% |
N49T (AAC→ACC) |
rdgB → |
XTP/dITP diphosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,716,167 | 0 | A | C | 10.1%
| 357.3
/ 2.9
| 180 | N49T (AAC→ACC) | rdgB | XTP/dITP diphosphatase |
| Reads supporting (aligned to +/- strand): ref base A (92/64); new base C (3/21); total (95/85) |
| Fisher's exact test for biased strand distribution p-value = 1.66e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 192 total aligned reads displayed.
AAAGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGA > NZ_CP022686/1716028‑1716305
|
aaaGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTACGCTGAAGAAACCGGCCTGACCTTTATCGaaaa > 5:40207/1‑140 (MQ=255)
aGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAACAAACCGGCCTGACCTTTATCGaaaa > 3:39742/1‑138 (MQ=255)
aGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGAGGCCCAAACAGCCCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGCATAcg > 6:1059288/1‑140 (MQ=255)
gTTGTCCTGGCAACCGGCAATGCCGGTAAAGTGCGTTAGCTGGCGTCGCTGCTTAGCGAGTTCGGTCTTGATATCGTGGCCCAAAAAGACCTCGGCGTATATTCCGCTTAAGAAACCGGCCTGACCTTTATCGAAAAcgc < 6:859466/140‑1 (MQ=255)
gTTGTCCTCGCAACGGTCTATGCCGGTATTGTGGGTGAGGTGGGGTCGGTGCTTAGCGACTTCGGTCTTGTTATCGTGGCCCATACTGACCTCGGCGTAGTTTCCGCTGAAGAAACCGGCCTGTCCTTTATCGAATAc < 4:225576/138‑1 (MQ=255)
gTTGTACTCGCAACCGGCAATGCCGGTAAAGGGCGTGAGCTGGCGGCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAACCAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAAcgc < 8:549820/140‑1 (MQ=255)
gCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTgca > 6:500645/1‑138 (MQ=255)
ccGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAgcg < 7:35646/140‑1 (MQ=255)
aactGCCGGAAATGTCCGTCTGGTGGCGTCGCTGGTAAGCTAGTGCGGTTTTTAAATCG‑GGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAgcgcgc < 2:141015/135‑1 (MQ=255)
aaTGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCa < 6:953143/140‑1 (MQ=255)
aaTGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGGCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAgcgcgc < 3:1178252/138‑1 (MQ=255)
aaTGCCGGTAAAGTGCGTGAGCTGGCGTCGCGGCTTAGCGACTTCGGGCGTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCa < 5:288609/140‑1 (MQ=255)
aaTGCCGGTAAAGTGCGGGAGCGGGCGGCGCTGCTTAGCGACTTCGGTCTTGATATCGGGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAgcgcgc < 3:1309938/138‑1 (MQ=255)
aaTGACTGTAAAGTGCGGGAGCTGGATTCGCTGCTTAGCGACTTCGGTCTTTATATCGTGGCCCAAACAGACCTCGGCTTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAACCGCGATTCTGAAAgcgcgc < 1:1258663/138‑1 (MQ=255)
gTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGCCTTCGGTCTTGATATCGTGGCCCAAACCGACCTCGGCGTAGAGTCCGCTGAAGAAACCGTCCTGCCCGTTTTCGAAAACGCGATTCTGCAAGCGCGCCATGCGGCa > 6:998262/1‑140 (MQ=255)
gTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCa > 8:672308/1‑140 (MQ=255)
aaaGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCa > 1:46956/1‑138 (MQ=255)
aaaGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCa > 4:378575/1‑138 (MQ=255)
tGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAACCAGACCACGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAACCGCGATTCTGACAGCGCGCCATGCGGCAAAAGTg > 5:190292/1‑140 (MQ=255)
tGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGCCCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGCCCTTTATCGCAAACGCGATTCTGAAAGCGCGCCCTGCGGCAAAAGTg > 7:450617/1‑140 (MQ=255)
tGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGtt > 7:708603/1‑139 (MQ=255)
gCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGa > 7:436320/1‑140 (MQ=255)
cgggAGCGGGCGTCGCGGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAACCAGACCTCGGCGTAGATTCCGCTGAAGAAACCGCCCTGACCTTTATCGAAACCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTg < 3:197387/135‑1 (MQ=255)
cGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGAc < 7:648047/140‑1 (MQ=255)
cGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGAc > 6:156951/1‑140 (MQ=255)
cGTGAGCTGGCGGCGCTGCTTAGCTACTTCGGTCTTGATATCGGGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGAc < 5:44085/140‑1 (MQ=255)
tGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGAc > 2:1175893/1‑138 (MQ=255)
tGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGAc > 4:73458/1‑138 (MQ=255)
aGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCAGCTGAAGAAACCGGCCTGACCGTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCg > 1:369703/1‑138 (MQ=255)
tGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGtt < 3:438260/138‑1 (MQ=255)
ggCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTAc > 8:219918/1‑140 (MQ=255)
gTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGAGACCGGTTTAcc < 4:1117606/138‑1 (MQ=255)
agacaagctTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTAcc < 3:447275/132‑1 (MQ=255)
gctTAGCGACATCCGTCTTGATATCGTGGCCCAACCAGACCTCGGCGTAGATTCCCCTGAAGAAACCGGCCTGACCATTATCGAAAACGCCATTCTGAAAGCCCGCCCTGCGGCAAAATTGGCAGGTTTAACGCCaaa > 2:226268/1‑137 (MQ=255)
ttAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGCCCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGAGTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGGTTACCGGCAATTg > 1:992502/1‑138 (MQ=255)
cgCGACTTCGGTCTTGATTTGCTGGCCAAAACATAACTCGGCGTATATTCCGCTGAATAACCCGCCATGTCCTTTATCTAAAACGCTATTCTGAAAGCGCGCAATGCGGCAAATGTGACCGGTTTACCGGCAATTGCaga < 8:1029922/139‑1 (MQ=255)
aGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCCGCAAAAGTGACCGGTTTACCGGCAATTGCcgc > 6:1227215/1‑139 (MQ=255)
gtgggTTTTTATATCGTGGCCCAAACAGACCTCGGCTTAGATTCCGCTTAATAACCGGGCCTGACATTTATCGAAACCGCGATTCTTAAAGCGCGCCATGCGGAAAAAGTGACCGGTTTACCGGAAATGGCCGACGACTc < 6:30741/137‑1 (MQ=255)
tCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCCTGCGGCAAAAGAGACCGGTTTACCGGCAATTGCCgccgaca > 2:872921/1‑137 (MQ=255)
tCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTcc > 8:582579/1‑140 (MQ=255)
tCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTcc > 6:720644/1‑140 (MQ=255)
tCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTcc > 5:1233645/1‑140 (MQ=255)
tCGGTCTTGATATCGTGGCCAAAACAGACCTCGGCGTAGATTCCGCTGAAGACACCGGCCTGACCTTAATCGAAAACGCGATACTGAAAGCGCCCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTgcctccgcctcc > 8:808777/1‑140 (MQ=255)
ggTCTTGATATCGTGGCCCAAACAGACCTCGTCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTcc > 4:184501/1‑138 (MQ=255)
ggTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTcc > 4:1321024/1‑138 (MQ=255)
cTTGATATCGTTGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTAATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCt > 8:30296/1‑140 (MQ=255)
atatCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAAcgc > 5:208842/1‑70 (MQ=255)
tatCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGc > 2:1060293/1‑138 (MQ=255)
atCGTGGCCCAAACAGACATCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGAGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCg > 4:119370/1‑138 (MQ=255)
gTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGCCCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGa > 7:392865/1‑140 (MQ=255)
gTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTAGCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTAACGGCAATTGCCGACGACTCAGGTGAGGCGGTAgc > 8:27046/1‑139 (MQ=255)
tGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGAt < 8:436320/140‑1 (MQ=255)
ggCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGCCGACTCCGGTCTGGCGGTAGa > 2:452873/1‑138 (MQ=255)
ggCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGa > 3:546906/1‑138 (MQ=255)
cccAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATg > 4:313715/1‑138 (MQ=255)
cccAAACAGACCTCGGCGTAGATTCCGCTGAAGAAAACGGCCTGACCTTAATCGAAAACGCTATTATCAAAGCGCGCCATGCGGCAAAATTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATg < 4:104811/138‑1 (MQ=255)
cTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgc > 2:1148667/1‑138 (MQ=255)
cTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGAGATTCTGAAAGCGCGCCCTGCTGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgc > 3:718738/1‑138 (MQ=255)
tCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcg > 2:67698/1‑138 (MQ=255)
cggcggAGACTCCGCTGACGAACCCGCCCGGACCTTTACCCAACCCGCGATTCGGAACGCGCGCCATGCGGCAAACGTGCCCGGCTTCCCGGCAATGGCCGACGACTCCGGTCTGGCGGTAGATGCGCGGGGTGgcgcgc < 8:1120829/140‑1 (MQ=255)
cGGCGTATATTCCGCTTAATAACCCGGCCTGACCTTTATCTCAACCGCGATTCTGAAAGCGCGCCAGGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgc < 2:486909/138‑1 (MQ=255)
cGGCGTAGTTGCCGCTGAACAAAGCGGCCTGCCTATTAGCCATAACGCGAGTCTCAAGGCGCGCCATCCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgc < 4:183684/138‑1 (MQ=255)
cGGCGTAGATTCCGCTGACGAACCCGGCCTGCCCTTTACCCAAACCGCGATTCTGAACGCGCGCCATGCGGCAAAAGTGCCCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgc < 4:449450/138‑1 (MQ=255)
cGGCGTAGATTCCGCTGACGAAACGGGCCTGCACTTTTTCTAAACCGCGATTCTGAACGCGCGCCATGCGTCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 5:1087431/140‑1 (MQ=255)
cGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGGGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 7:320300/140‑1 (MQ=255)
cGGCGTAGATGCCGCTGATGAAACCGGCCTGACCATTATCTAAACCGCGATTCTCAACGCGCGCCATGCGGAAAAAGTGACGGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 7:514834/140‑1 (MQ=255)
cGGCGTAGATACCGCTTAAGAACCCGGCCTCACCTTTATCGAAACCGCTATTCTGAAAGCGCGCCCTGCGGCAAAAGTCACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgc < 4:927686/138‑1 (MQ=255)
ggtttgATTCCGCTGACGAACCCGGCCTCACATTTTACTAAAACGCGATTATGAAAGCGCGCCTTCCGGAAAAAGTGACCGGTTTACCGGAATTTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 1:341796/133‑1 (MQ=255)
gCGTATATACCGCTTAAGAAACCGGCCTCACATTAATCCAAAACGCTATTCTCAAAGCGCGCCATGCGGCAAATGTCCCCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 3:311486/138‑1 (MQ=255)
gCGTATATACCGCTACAGAAACCGGCCTGAACTTTATCTAAAACGCGATTCTTAAAGCGCGCCATGCGGCAAAAGTGACCGGTTAACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 1:552067/138‑1 (MQ=255)
gCGTAGTTTCCGCTGAAGAAACCGGCCTGACCTTTATCTAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCg < 8:392865/140‑1 (MQ=255)
gCGTAGATTCCGCTGAAGAACCCGGCCTCACATTTATCTAAAACGCGATTCTGAAAGCGCGCCATGCGGAAAAAGGGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCg < 6:931634/140‑1 (MQ=255)
gCGTAGATTCCGCTGAAGAAACCGGCCTCACCTTTATCTAAACCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGGGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCg < 8:553984/140‑1 (MQ=255)
gCGTAGATGCCGCTGAACAACCCGGCCTCACCTTAAACCAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAACGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgcgc < 3:884329/138‑1 (MQ=255)
gCGTAGAATCCGCTGAACAAACCGGCCTGACCTTTATCTAACACGCGATTCTGAAAGCGCGCAATGCGGCAAAAGTGCCCGGTTTACCGCAAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCg < 5:351225/140‑1 (MQ=255)
gCGAAGTTTCCGCTGCATAACCCGGCCGCACCTTTATCGAAAACGCTATTCGGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGGCTGGCGGTAGATGCGCTGGGTGGCGCGCCg < 7:965224/140‑1 (MQ=255)
cGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGACATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGcc > 1:627261/1‑138 (MQ=255)
aTTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCa < 5:599975/58‑1 (MQ=255)
aTTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTg < 4:656231/126‑1 (MQ=255)
aTTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTa > 1:1157201/1‑138 (MQ=255)
tcaataaaCCGGCCTGACCTTTATCTAAACCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTTACCGGTTTACGGGCATTTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCcg < 6:164082/135‑1 (MQ=255)
tGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTc < 4:629194/138‑1 (MQ=255)
agaaACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGCCCGGTTTACCGGCAATTGCCGCCGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTAGTTACTCcgcgc > 7:833370/1‑140 (MQ=255)
taaaCCGGCCTTCCATTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGAAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCcgcg < 1:1069510/137‑1 (MQ=255)
caacccGGCCTGACCTTTATCGAAACCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGAAATTCCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGGGGCGCGCCGGGTATTTACTCcgcgcg < 5:566519/136‑1 (MQ=255)
actggCCTTACGTTTATCGAAAACGTTTTTCTGAAAGCGCGCCATGCGGCAAATGTGACCGTTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTa < 8:159602/137‑1 (MQ=255)
aCCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGCCTCCGGGCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTTTTTACTCAGCGCGTTa > 7:393689/1‑140 (MQ=255)
cGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTa > 3:651189/1‑138 (MQ=255)
cGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTAtt > 5:919084/1‑140 (MQ=255)
cGGCCTGACCTTTATCGAAAACGCGATTCTCAAAGCGCGCCAAGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCTACGACTCCGGTCTGCCGGTTGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTa > 1:1359092/1‑138 (MQ=255)
ggCCTTACCTTTATGCAAAACGCGATTCTTAAAGCGGGCATTGCGGAAAAAGGCACGGGTTTACCGGAATTTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTAt < 3:1119028/138‑1 (MQ=255)
ccTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCTCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCg > 6:535631/1‑140 (MQ=255)
tGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGgcgc < 2:59112/109‑1 (MQ=255)
tCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGCCCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGAcg > 4:287939/1‑138 (MQ=255)
ctaaaaCGCGATTCTTAAAGCGCGACATGCGGCAAAAGTGACCGTTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGa < 6:1279295/138‑1 (MQ=255)
cGAAAACGCGATTCTTAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGAAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGa < 6:658633/140‑1 (MQ=255)
aaaaCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGAcc < 8:324259/140‑1 (MQ=255)
aaCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGAc > 8:116694/1‑38 (MQ=255)
aaCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGAcc > 1:1028074/1‑138 (MQ=255)
aaCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGCGAATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGa > 8:693661/1‑140 (MQ=255)
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AAAGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCCGGTCTGGCGGTAGATGCGCTGGGTGGCGCGCCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGA > NZ_CP022686/1716028‑1716305
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
