mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 4010190 | 765 (1.650) | 6 (0.010) | 4/252 | NT | 0.78% | intergenic (‑34/‑71) | EO946_RS20605/EO946_RS20610 | hypothetical protein/MFS transporter |
| ? | NZ_CP034943 | 4010195 = | 755 (1.630) | intergenic (‑39/‑66) | EO946_RS20605/EO946_RS20610 | hypothetical protein/MFS transporter | |||||
| * | ? | NZ_CP034943 | = 2924433 | 541 (1.170) | 3 (0.010) | 3/246 | NT | 0.56% | coding (593/1107 nt) | tbcS | tetraprenyl‑beta‑curcumene synthase |
| ? | NZ_CP034943 | 2924437 = | 536 (1.190) | coding (589/1107 nt) | tbcS | tetraprenyl‑beta‑curcumene synthase | |||||
| * | ? | NZ_CP034943 | 2557054 = | 488 (1.050) | 4 (0.010) | 3/226 | NT | 0.93% | coding (180/756 nt) | EO946_RS13225 | metal‑binding protein ZinT |
| ? | NZ_CP034943 | = 2557050 | 419 (1.010) | coding (184/756 nt) | EO946_RS13225 | metal‑binding protein ZinT | |||||
| * | ? | NZ_CP034943 | = 767759 | 401 (0.870) | 4 (0.010) | 3/194 | NT | 1.0% | coding (206/645 nt) | EO946_RS03930 | hypothetical protein |
| ? | NZ_CP034943 | 767856 = | 449 (1.260) | coding (109/645 nt) | EO946_RS03930 | hypothetical protein | |||||
| * | ? | NZ_CP034943 | = 607306 | 386 (0.830) | 6 (0.010) +TGGAGCG |
5/238 | NT | 1.3% | coding (149/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607827 = | 604 (1.300) | coding (670/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| * | ? | NZ_CP034943 | = 607207 | 551 (1.190) | 5 (0.010) +TGGAGCG |
5/238 | NT | 0.91% | coding (50/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607827 = | 604 (1.300) | coding (670/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| * | ? | NZ_CP034943 | 607179 = | 609 (1.320) | 10 (0.020) | 3/236 | NT | 2.1% | coding (22/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | = 607466 | 342 (0.790) | coding (309/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| * | ? | NZ_CP034943 | = 427699 | 661 (1.440) | 3 (0.010) +ACTG |
3/242 | NT | 0.46% | coding (37/108 nt) | EO946_RS02195 | YjcZ family sporulation protein |
| ? | NZ_CP034943 | 427700 = | 667 (1.440) | coding (36/108 nt) | EO946_RS02195 | YjcZ family sporulation protein | |||||
| * | ? | NZ_CP034943 | = 35429 | 629 (1.360) | 6 (0.010) +AA |
3/248 | NT | 0.97% | intergenic (+28/‑105) | csfB/EO946_RS00185 | anti‑sigma‑G factor/5‑bromo‑4‑chloroindolyl phosphate hydrolysis family protein |
| ? | NZ_CP034943 | 35445 = | 621 (1.340) | intergenic (+44/‑89) | csfB/EO946_RS00185 | anti‑sigma‑G factor/5‑bromo‑4‑chloroindolyl phosphate hydrolysis family protein | |||||
| * | ? | NZ_CP034943 | = 35030 | NA (NA) | 3 (0.010) +TTACTT |
3/240 | NT | 0.49% | intergenic (+1/‑177) | rrf/csfB | 5S ribosomal RNA/anti‑sigma‑G factor |
| ? | NZ_CP034943 | 629576 = | 637 (1.380) | intergenic (+16/‑7) | rrf/EO946_RS03295 | 5S ribosomal RNA/tRNA‑Met | |||||