mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1237 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4638329 | 170 (1.080) | 9 (0.060) | 5/168 | NT | 5.2% | coding (152/1353 nt) | creD | inner membrane protein |
| ? | NC_000913 | = 4638348 | 166 (1.110) | coding (171/1353 nt) | creD | inner membrane protein | |||||
| * | ? | NC_000913 | 4637524 = | 169 (1.070) | 7 (0.050) | 5/162 | NT | 4.5% | coding (829/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | 4637555 = | 145 (1.010) | coding (860/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | = 4636885 | 136 (0.860) | 18 (0.120) | 8/168 | NT | 11.8% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 140 (0.940) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | 4636324 = | 180 (1.140) | 9 (0.060) | 5/164 | NT | 5.4% | coding (318/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | 4636375 = | 148 (1.020) | coding (369/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | = 4631855 | 181 (1.150) | 8 (0.050) | 5/166 | NT | 4.4% | coding (1123/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | = 4631875 | 180 (1.220) | coding (1143/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | 4625722 = | 154 (0.970) | 16 (0.110) | 9/164 | NT | 10.7% | coding (828/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | NC_000913 | 4625746 = | 124 (0.850) | coding (852/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| * | ? | NC_000913 | 4618029 = | 189 (1.200) | 14 (0.100) | 7/166 | NT | 8.2% | coding (707/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4618065 = | 139 (0.940) | coding (743/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | = 4614762 | 188 (1.190) | 14 (0.090) | 9/170 | NT | 7.1% | coding (782/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme |
| ? | NC_000913 | = 4614786 | 187 (1.240) | coding (758/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme | |||||
| * | ? | NC_000913 | = 4607047 | 171 (1.080) | 14 (0.090) | 6/168 | NT | 8.0% | coding (654/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4607088 | 161 (1.080) | coding (613/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | = 4602165 | 136 (0.860) | 14 (0.100) | 7/164 | NT | 9.5% | coding (694/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | = 4602178 | 141 (0.970) | coding (681/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||