mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 949 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636885 | 80 (0.920) | 6 (0.070) | 4/168 | NT | 7.0% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 83 (1.020) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | 4634944 = | 80 (0.920) | 7 (0.080) | 3/170 | NT | 7.9% | coding (367/870 nt) | rob | right oriC‑binding transcriptional activator, AraC family |
| ? | NC_000913 | 4634972 = | 86 (1.040) | coding (339/870 nt) | rob | right oriC‑binding transcriptional activator, AraC family | |||||
| * | ? | NC_000913 | 4634391 = | 97 (1.120) | 9 (0.110) | 6/164 | NT | 9.6% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 81 (1.020) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | 4622972 = | 104 (1.200) | 3 (0.040) | 3/166 | NT | 3.1% | coding (1204/1332 nt) | yjjJ | putative protein kinase |
| ? | NC_000913 | 4623004 = | 93 (1.150) | coding (1236/1332 nt) | yjjJ | putative protein kinase | |||||
| * | ? | NC_000913 | 4621160 = | 108 (1.250) | 5 (0.060) | 4/162 | NT | 5.0% | coding (278/720 nt) | deoD | purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase |
| ? | NC_000913 | 4621189 = | 92 (1.170) | coding (307/720 nt) | deoD | purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase | |||||
| * | ? | NC_000913 | = 4619938 | 82 (0.950) | 6 (0.070) | 5/166 | NT | 7.6% | coding (336/1224 nt) | deoB | phosphopentomutase |
| ? | NC_000913 | = 4619964 | 70 (0.870) | coding (362/1224 nt) | deoB | phosphopentomutase | |||||
| * | ? | NC_000913 | 4611259 = | 102 (1.180) | 4 (0.050) | 3/162 | NT | 4.2% | intergenic (+256/‑137) | prfC/osmY | peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein |
| ? | NC_000913 | 4611304 = | 89 (1.130) | intergenic (+301/‑92) | prfC/osmY | peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 4607047 | 94 (1.090) | 7 (0.090) | 6/168 | NT | 6.9% | coding (654/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4607088 | 99 (1.210) | coding (613/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | 4601768 = | 93 (1.070) | 5 (0.060) | 4/166 | NT | 5.5% | coding (330/474 nt) | yjjB | DUF3815 family inner membrane protein |
| ? | NC_000913 | 4601790 = | 85 (1.050) | coding (308/474 nt) | yjjB | DUF3815 family inner membrane protein | |||||
| * | ? | NC_000913 | 4601572 = | 95 (1.100) | 4 (0.050) | 4/162 | NT | 4.6% | intergenic (‑55/+52) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein |
| ? | NC_000913 | 4601608 = | 79 (1.000) | intergenic (‑91/+16) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein | |||||