mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence (highest frequency 20 of 31 shown, sorted by frequency from high to low) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,314,594 | 0 | C | T | 74.6% | 249.0 / 100.8 | 138 | A283A (GCC→GCT) | hisB | fused histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase |
| * | minE | 1,314,597 | 0 | G | A | 74.6% | 252.8 / 98.4 | 138 | E284E (GAG→GAA) | hisB | fused histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase |
| * | minE | 1,049,235 | 0 | C | A | 69.8% | 27.8 / 45.5 | 43 | A94E (GCG→GAG) | ydhJ | undecaprenyl pyrophosphate phosphatase |
| * | minE | 513,101 | 1 | . | T | 64.2% | 215.4 / 129.1 | 95 | coding (636/1284 nt) | ybhC | predicted pectinesterase |
| * | minE | 1,240,909 | 1 | . | A | 61.7% | 195.8 / 144.2 | 94 | coding (342/870 nt) | yebK | predicted DNA‑binding transcriptional regulator |
| * | minE | 2,309,231 | 0 | G | . | 59.7% | ‑0.0 / 151.1 | 67 | coding (666/960 nt) | ftsN | essential cell division protein |
| * | minE | 2,569,694 | 1 | . | A | 54.4% | 167.7 / 199.2 | 103 | intergenic (‑500/‑37) | mtlA/yibI | fused mannitol‑specific PTS enzyme IIABC components/predicted inner membrane protein |
| * | minE | 1,370,325 | 0 | C | A | 50.0% | 23.2 / 71.5 | 50 | T93N (ACC→AAC) | yohK | predicted inner membrane protein |
| * | minE | 1,846,899 | 0 | A | . | 48.1% | 90.1 / 102.2 | 54 | coding (654/1038 nt) | iap | aminopeptidase in alkaline phosphatase isozyme conversion |
| * | minE | 1,648,641 | 1 | . | T | 47.7% | 138.8 / 199.2 | 86 | intergenic (‑74/‑139) | yfgO/yfgC | predicted inner membrane protein/predicted peptidase |
| * | minE | 1,006,309 | 0 | T | C | 41.7% | 9.7 / 43.4 | 36 | G64G (GGT→GGC) | ydgH | hypothetical protein |
| * | minE | 2,065,049 | 0 | C | T | 41.7% | 83.2 / 151.1 | 120 | Y430Y (TAC→TAT) | rpoD | RNA polymerase, sigma 70 (sigma D) factor |
| * | minE | 2,065,052 | 0 | A | G | 41.7% | 61.0 / 160.0 | 120 | A431A (GCA→GCG) | rpoD | RNA polymerase, sigma 70 (sigma D) factor |
| * | minE | 2,911,898 | 1 | . | T | 37.5% | 62.2 / 82.7 | 48 | intergenic (+193/+13) | mgtA/yjgF | magnesium transporter/ketoacid‑binding protein |
| * | minE | 2,497,948 | 0 | C | A | 33.7% | 345.3 / 174.9 | 187 | P163Q (CCA→CAA) | ilvB | acetolactate synthase I, large subunit |
| * | minE | 1,004,946 | 1 | . | A | 33.3% | 147.1 / 228.4 | 135 | coding (649/1533 nt) | pntA | pyridine nucleotide transhydrogenase, alpha subunit |
| * | minE | 1,984,916 | 0 | A | . | 33.3% | 85.1 / 53.4 | 42 | coding (656/1137 nt) | yggW | predicted oxidoreductase |
| * | minE | 1,984,917 | 0 | T | . | 33.3% | 97.1 / 49.9 | 42 | coding (657/1137 nt) | yggW | predicted oxidoreductase |
| * | minE | 2,068,600 | 0 | G | A | 33.3% | 89.0 / 70.6 | 75 | A397V (GCC→GTC) | aer | fused signal transducer for aerotaxis sensory component and methyl accepting chemotaxis component |
| * | minE | 2,741,879 | 0 | T | C | 30.3% | 151.5 / 94.7 | 109 | S30P (TCG→CCG) | rplV | 50S ribosomal subunit protein L22 |