mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4304456 = | 53 (1.090) | 3 (0.060) | 3/96 | NT | 4.8% | coding (56/1467 nt) | yjcP | predicted outer membrane factor of efflux pump |
| ? | W3110S.gb | 4304483 = | 68 (1.450) | coding (29/1467 nt) | yjcP | predicted outer membrane factor of efflux pump | |||||
| * | ? | W3110S.gb | 1884125 = | 76 (1.560) | 3 (0.070) | 3/92 | NT | 4.6% | coding (500/1086 nt) | yeaU | predicted dehydrogenase |
| ? | W3110S.gb | 1884153 = | 54 (1.210) | coding (528/1086 nt) | yeaU | predicted dehydrogenase | |||||
| * | ? | W3110S.gb | 1547131 = | 60 (1.230) | 3 (0.070) | 3/94 | NT | 4.6% | coding (298/957 nt) | yddK | hypothetical protein |
| ? | W3110S.gb | 1547165 = | 67 (1.460) | coding (264/957 nt) | yddK | hypothetical protein | |||||
| * | ? | W3110S.gb | = 713887 | 458 (9.400) | 5 (0.120) | 4/86 | NT | 1.2% | coding (479/546 nt) | seqA | regulatory protein for replication initiation |
| ? | W3110S.gb | = 713894 | 461 (11.010) | coding (486/546 nt) | seqA | regulatory protein for replication initiation | |||||
| * | ? | W3110S.gb | = 713546 | 346 (7.100) | 3 (0.070) | 3/86 | NT | 0.92% | coding (138/546 nt) | seqA | regulatory protein for replication initiation |
| ? | W3110S.gb | = 713562 | 348 (8.310) | coding (154/546 nt) | seqA | regulatory protein for replication initiation | |||||
| * | ? | W3110S.gb | 652499 = | 74 (1.520) | 3 (0.070) | 3/92 | NT | 4.7% | coding (1042/1659 nt) | citA | sensory histidine kinase in two‑component regulatory system with citB |
| ? | W3110S.gb | 652526 = | 54 (1.210) | coding (1069/1659 nt) | citA | sensory histidine kinase in two‑component regulatory system with citB | |||||
| * | ? | W3110S.gb | 389660 = | 109 (2.240) | 4 (0.090) | 3/92 | NT | 3.9% | coding (186/1461 nt) | yaiT | hypothetical protein |
| ? | W3110S.gb | 389686 = | 96 (2.140) | coding (212/1461 nt) | yaiT | hypothetical protein | |||||
| * | ? | W3110S.gb | 236667 = | 805 (16.530) | 3 (0.070) | 3/90 | NT | 0.44% | coding (601/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | W3110S.gb | 236684 = | 626 (14.280) | coding (618/732 nt) | dnaQ | DNA polymerase III epsilon subunit | |||||
| * | ? | W3110S.gb | = 152663 | 96 (1.970) | 3 (0.070) | 3/90 | NT | 3.2% | coding (150/570 nt) | yadM | predicted fimbrial‑like adhesin protein |
| ? | W3110S.gb | = 152688 | 93 (2.120) | coding (125/570 nt) | yadM | predicted fimbrial‑like adhesin protein | |||||
| * | ? | W3110S.gb | = 70537 | 344 (7.060) | 3 (0.070) | 3/88 | NT | 1.0% | coding (151/879 nt) | araC | DNA‑binding transcriptional dual regulator |
| ? | W3110S.gb | = 70552 | 283 (6.600) | coding (166/879 nt) | araC | DNA‑binding transcriptional dual regulator | |||||