mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 994 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4620353 | 393 (0.830) | 9 (0.020) | 3/94 | NT | 2.6% | intergenic (‑14/‑197) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble |
| ? | CP009273 | = 4620382 | 347 (0.880) | intergenic (‑43/‑168) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble | |||||
| * | ? | CP009273 | = 4619007 | 438 (0.930) | 6 (0.020) | 5/84 | NT | 2.2% | coding (1333/1668 nt) | yjjK | putative transporter subunit of ABC superfamily: ATP‑binding component |
| ? | CP009273 | 4619854 = | 197 (0.560) | coding (486/1668 nt) | yjjK | putative transporter subunit of ABC superfamily: ATP‑binding component | |||||
| * | ? | CP009273 | 4618560 = | NA (NA) | 5 (0.010) | 4/98 | NT | 1.3% | noncoding (49/150 nt) | RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site |
| ? | CP009273 | 4618593 = | 368 (0.890) | noncoding (82/150 nt) | RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
| * | ? | CP009273 | = 4616991 | 250 (0.530) | 7 (0.020) | 3/96 | NT | 3.1% | coding (1263/1383 nt) | radA | DNA repair protein |
| ? | CP009273 | = 4616997 | 221 (0.550) | coding (1269/1383 nt) | radA | DNA repair protein | |||||
| * | ? | CP009273 | = 4616792 | 329 (0.700) | 4 (0.010) | 3/102 | NT | 1.2% | coding (1064/1383 nt) | radA | DNA repair protein |
| ? | CP009273 | = 4616815 | 368 (0.860) | coding (1087/1383 nt) | radA | DNA repair protein | |||||
| * | ? | CP009273 | = 4615692 | 494 (1.050) | 6 (0.010) | 6/98 | NT | 1.3% | intergenic (+12/‑37) | serB/radA | 3‑phosphoserine phosphatase/DNA repair protein |
| ? | CP009273 | = 4615698 | 481 (1.170) | intergenic (+18/‑31) | serB/radA | 3‑phosphoserine phosphatase/DNA repair protein | |||||
| * | ? | CP009273 | 4607857 = | 486 (1.030) | 11 (0.030) | 6/96 | NT | 2.6% | coding (718/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | CP009273 | 4607913 = | NA (NA) | coding (774/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | CP009273 | 4604234 = | 506 (1.070) | 7 (0.020) | 5/106 | NT | 1.4% | noncoding (161/388 nt) | REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences | REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences |
| ? | CP009273 | 4604400 = | 485 (1.090) | noncoding (327/388 nt) | REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences | REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences | |||||
| * | ? | CP009273 | 4604006 = | 657 (1.390) | 4 (0.010) | 3/100 | NT | 0.68% | coding (709/780 nt) | yjjV | putative DNase |
| ? | CP009273 | 4604021 = | 590 (1.400) | coding (724/780 nt) | yjjV | putative DNase | |||||
| * | ? | CP009273 | = 4603957 | 238 (0.500) | 11 (0.030) | 5/94 | NT | 4.6% | coding (660/780 nt) | yjjV | putative DNase |
| ? | CP009273 | = 4603970 | 255 (0.640) | coding (673/780 nt) | yjjV | putative DNase | |||||