mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 640 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4620353 | 270 (0.760) | 5 (0.020) | 3/94 | NT | 1.9% | intergenic (‑14/‑197) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble |
| ? | CP009273 | = 4620382 | 287 (0.970) | intergenic (‑43/‑168) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble | |||||
| * | ? | CP009273 | = 4619007 | 381 (1.080) | 3 (0.010) | 3/84 | NT | 1.3% | coding (1333/1668 nt) | yjjK | putative transporter subunit of ABC superfamily: ATP‑binding component |
| ? | CP009273 | 4619854 = | 167 (0.630) | coding (486/1668 nt) | yjjK | putative transporter subunit of ABC superfamily: ATP‑binding component | |||||
| * | ? | CP009273 | 4607857 = | 389 (1.100) | 7 (0.020) | 5/96 | NT | 2.1% | coding (718/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | CP009273 | 4607913 = | NA (NA) | coding (774/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | CP009273 | 4603949 = | 266 (0.750) | 5 (0.020) | 3/94 | NT | 2.5% | coding (652/780 nt) | yjjV | putative DNase |
| ? | CP009273 | 4603980 = | 167 (0.560) | coding (683/780 nt) | yjjV | putative DNase | |||||
| * | ? | CP009273 | = 4601386 | 407 (1.150) | 5 (0.020) | 3/104 | NT | 1.2% | coding (174/606 nt) | osmY | periplasmic protein |
| ? | CP009273 | = 4601403 | 429 (1.310) | coding (191/606 nt) | osmY | periplasmic protein | |||||
| * | ? | CP009273 | = 4549748 | 225 (0.640) | 3 (0.010) | 3/100 | NT | 1.4% | coding (70/462 nt) | yjiG | SpmB family inner membrane protein |
| ? | CP009273 | = 4549757 | 237 (0.750) | coding (61/462 nt) | yjiG | SpmB family inner membrane protein | |||||
| * | ? | CP009273 | 4548119 = | 260 (0.740) | 3 (0.010) | 3/88 | NT | 1.4% | intergenic (‑13/+52) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase |
| ? | CP009273 | 4548166 = | 206 (0.740) | intergenic (‑60/+5) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase | |||||
| * | ? | CP009273 | = 4538708 | 361 (1.020) | 12 (0.040) | 5/94 | NT | 4.0% | coding (84/903 nt) | fimH | minor component of type 1 fimbriae |
| ? | CP009273 | = 4538723 | 277 (0.930) | coding (99/903 nt) | fimH | minor component of type 1 fimbriae | |||||
| * | ? | CP009273 | 4537625 = | 371 (1.050) | 7 (0.020) | 4/96 | NT | 2.4% | coding (67/531 nt) | fimF | minor component of type 1 fimbriae |
| ? | CP009273 | 4537649 = | 250 (0.830) | coding (91/531 nt) | fimF | minor component of type 1 fimbriae | |||||
| * | ? | CP009273 | 4535241 = | 422 (1.200) | 7 (0.020) | 5/94 | NT | 2.0% | coding (329/2637 nt) | fimD | fimbrial usher outer membrane porin protein; FimCD chaperone‑usher |
| ? | CP009273 | 4535424 = | 346 (1.170) | coding (512/2637 nt) | fimD | fimbrial usher outer membrane porin protein; FimCD chaperone‑usher | |||||