Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
177 |
96.4 |
2178490 |
87.4% |
1904000 |
226.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGG > NC_000913/2173120‑2173609
|
CCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATG > M01186:129:000000000‑A5M8V:1:1106:18705:16726/1‑251 (MQ=60)
CGCATGAGCCCCCAGTTGGGTGTGAAAACCAATGGTTTGCGTCGCGATCCACGGGGTGATGCCAAAAATGATGACCCCCGAGATTAAGGTGCGGAACATATTCCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTC < M01186:129:000000000‑A5M8V:1:2108:20708:16103/251‑1 (MQ=60)
GCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGCATGTC > M01186:129:000000000‑A5M8V:1:2105:24275:23095/1‑250 (MQ=60)
ctttgGCCGCCAGTTGGGTTTGCAACCCAATGGTTGGGGTCGCGATCCACAGGGGGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCCCG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAACCGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCC < M01186:129:000000000‑A5M8V:1:2112:25612:20980/246‑1 (MQ=60)
tttcgcctccaggtgggttggcaaaccaatggtttggtggggattccaagggggaatgcacataatgatggcactcatGATTAAGGTGCGGAACAGATTTCCAAGATGCACG‑GCAACCGCCATCGCCCCGAAGAAGCCGATGGTGGCAAGATCGCCAAGCGGCAGTACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCC < M01186:129:000000000‑A5M8V:1:1102:7489:12301/172‑1 (MQ=60)
CAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAAC > M01186:129:000000000‑A5M8V:1:2108:15010:26325/1‑250 (MQ=60)
GCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGGATGTCCCAGCAGCAACGCCGGATCAAGG > M01186:129:000000000‑A5M8V:1:1105:22105:12111/1‑251 (MQ=60)
AACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAACCAGCAATTAAAATGGTAAGCGGGCAAAAAATCAGGCTTGCCGATACCACCC‑‑CCGAATGTCCCAGCAACAAAGCCGGAGCAAGGCCA > M01186:129:000000000‑A5M8V:1:2113:7700:24220/1‑251 (MQ=60)
CCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAAA > M01186:129:000000000‑A5M8V:1:1108:20528:17220/1‑251 (MQ=60)
CCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACACCGGATCAAGGCCAAA > M01186:129:000000000‑A5M8V:1:1101:16864:18710/1‑251 (MQ=60)
CCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGGGAGTGGGATAAAAATCAGGCTTGCCGTAACCA‑‑CCGCCGAATGTCCCCGCAGCAACGCCGGATCAAGGCCAAA > M01186:129:000000000‑A5M8V:1:1112:10892:14460/1‑251 (MQ=60)
GCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCcggtctcttatccacatttccga > M01186:129:000000000‑A5M8V:1:2105:12730:10451/1‑227 (MQ=60)
CCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGTTCAAGGCCAATCAGGAACTCCTGACCGCCGA > M01186:129:000000000‑A5M8V:1:1110:23487:14238/1‑251 (MQ=60)
CCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGCATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGA > M01186:129:000000000‑A5M8V:1:1101:6774:25273/1‑251 (MQ=60)
GGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGCGAGTGGGATAAAAATAAGGCTTGCCGACACCA‑‑CCGCCGTATGTGCCAGAACCAACGCCGGATCAAGGCCAACCAGGAACTCCTGCCCGCCGAACTT > M01186:129:000000000‑A5M8V:1:2114:23937:26529/1‑250 (MQ=60)
GGGTGATGCGCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGACAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATAAAAAAGGTGAGAGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGAGGCAACGCCGGATCAAGGCGAAGCCGGAACCCCTGACCGCCGAAatc > M01186:129:000000000‑A5M8V:1:2112:11035:26970/1‑247 (MQ=60)
CTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATAAAGGCCAATCAGGAACTCCTGACCCCCGAACTTCGCCTGTAA > M01186:129:000000000‑A5M8V:1:2107:11506:10784/1‑251 (MQ=60)
TCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGAAACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAACCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAA > M01186:129:000000000‑A5M8V:1:2104:16381:3938/1‑251 (MQ=60)
AGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCACCGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCCGTAACCGACTcagagcctcgtta > M01186:129:000000000‑A5M8V:1:2105:18889:15471/1‑238 (MQ=60)
aaagtggcggaacaatttcccaggagcCACG‑GCGCCCGCCACCCCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTCCCCGGCACACAAACAGCAATAAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGAT‑‑CCCCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGA < M01186:129:000000000‑A5M8V:1:1101:27661:17437/224‑1 (MQ=60)
TAAGGTGCGGAACAG‑TTTCCCCGGAGCCCGCGCGACCCCCACCGCCACGAAGAAGCCGATGGTGGAAAGTTCCCAAAACGGCAGCCCCTGATTCCCCGGCAACAAAACAGCAATTAAAAGGGTGAGTGGGATAAAAACCGGGCTTGCCGAT‑‑CCCCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGA < M01186:129:000000000‑A5M8V:1:2108:19253:22818/251‑1 (MQ=60)
taagggcaggaacaatttcccccgatgcccgccgccccatctcgccagaaacgagccgatgggtacaaggtccacaaacgcaAGCACCTGATTCCCCGACACACAACAAGCAATAAAAATGGTGGGTGGAATAAAAATCTGGCTTGCCGATAC‑‑CTCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGA < M01186:129:000000000‑A5M8V:1:2111:11193:21086/169‑1 (MQ=60)
aaggggggggaacgagttcccaggagacagggcgacgcccatgGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAAGGGCAGCACCTGATTCCCCGGCACACAAACAGAAATTAAAAGGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGA < M01186:129:000000000‑A5M8V:1:1106:5816:6686/208‑1 (MQ=60)
gggaaaaagtttcccccgatccccggcccccgcattcgcccagaagaggccgatgttgccaagaccccaAAACGGCAACACCTGATTCCCCGGCCCACAACCAGCAATTAAAAGGGTGAGTGGGAAAAAAACCAGGCTTGCCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGC < M01186:129:000000000‑A5M8V:1:2108:27882:10400/181‑1 (MQ=60)
GAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGCAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGACCTTCGCCTTTAAACGCCTACGAGCCTGCTTAGCCATGGGCGTTA > M01186:129:000000000‑A5M8V:1:1109:26337:9494/1‑251 (MQ=60)
AAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACTTGATTCCCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGAAAAAAATCAGGCTTGCCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAC < M01186:129:000000000‑A5M8V:1:1102:13713:9818/251‑1 (MQ=60)
aagttttcccgggtgccaggccacgcccatccccaaaaaaAAGCCGATGGTGGAAAGGCCGCAAAACGGCAGCCCCTGATTCCCCGGCACAAAAACAGCAATTAAAAGGGTGAGGGGGAAAAAAACCAGGCTTGCGGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAC < M01186:129:000000000‑A5M8V:1:2108:23553:24754/211‑1 (MQ=60)
aagttttcccagacgcacggcacccgccatcgccgagaaaaacccgatgggggaaaaATCGCCAAACGGAAGCACCTGTTTACCCGGCACAAAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAC < M01186:129:000000000‑A5M8V:1:2107:24951:22877/194‑1 (MQ=60)
aagtttcccaggaggcccggggaccgccacggcaacgagGAAGCCGATGGTGGCAAGATCACCAAACGGCAGCCCCTGATTACCCGGCACACAAACAGAAATTAAAATGTGGAGTGGAATAAAAACCAGGCTTGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAC < M01186:129:000000000‑A5M8V:1:2113:21033:20523/212‑1 (MQ=60)
GATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAACCGACTACGAGCCTGCTTAGCGATGGGCGTTAAAC > M01186:129:000000000‑A5M8V:1:1107:11392:19693/1‑249 (MQ=60)
GATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTaatcgc > M01186:129:000000000‑A5M8V:1:2114:17644:22258/1‑231 (MQ=60)
GATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGACAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGAATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCGTAAAACGACTACAAGCCTACTTAGACATGGGCGTTAACCCA > M01186:129:000000000‑A5M8V:1:1113:11189:22788/1‑251 (MQ=60)
ccgagtgacggggaccccccaacccaaagaagaagccgagggtggaaagttcgcaaacgggcagtcCCTGATTACCCGGCACACAAACAGCAATAAAAAGGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATG < M01186:129:000000000‑A5M8V:1:1111:13735:13820/185‑1 (MQ=60)
tgccgggcgcccccccacgccacgaaaaaccgagtggggaaaagttgcccaaacggccgcacctgattccccggcaacaaaaaagcaattaaaatggtggtggggaaaaaaaccgggttggccaatacCCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGG < M01186:129:000000000‑A5M8V:1:2108:22466:11991/123‑1 (MQ=60)
cgcccccccccgccccgaaaaagcgagggggggcaaaatcccaaaacggcaacccctaattcCCCGGCCCACAAACAGAAATAAAAAGGGTGAGTGGGATAAAAATCAGGTTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATC < M01186:129:000000000‑A5M8V:1:1114:11567:17324/189‑1 (MQ=60)
cccaagaAAGAAGCCGAGGGGGGAAAGATCGCCAAACGGCAGCCCCTGATTACCCGGACCAAAAACAGCAATTAAAAGGGTGATGGGGATAAAAATCAGGCTGGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCA < M01186:129:000000000‑A5M8V:1:1105:20626:16124/244‑1 (MQ=60)
GAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCA > M01186:129:000000000‑A5M8V:1:2110:16237:25746/1‑251 (MQ=60)
GAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCA > M01186:129:000000000‑A5M8V:1:1107:21645:13191/1‑251 (MQ=60)
atgggggaagaatcacgaagagccacaaccgtatacCCCGGCACAAAACCAGCAATTAAATTGGTGAGTGGGAAAAAAACCAGGTTTGCCGTTAC‑‑CGCCGCTGTATGTCCCAGCAGCAACGCCGGAGCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTG < M01186:129:000000000‑A5M8V:1:2107:18334:2715/214‑1 (MQ=60)
atggggaaaatcTCGCCAACCGGAAGCACCTGATTACCCGGCACAAAAACCGCAATTAAAATGGTGAGTGGAAAAAAAACCAGGCTTGCCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTG < M01186:129:000000000‑A5M8V:1:1109:18181:7014/238‑1 (MQ=60)
CCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTCCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCG > M01186:129:000000000‑A5M8V:1:1106:18622:7762/1‑250 (MQ=60)
CGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGGTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAG > M01186:129:000000000‑A5M8V:1:2109:6939:23476/1‑249 (MQ=60)
CGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGCCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCA > M01186:129:000000000‑A5M8V:1:2106:8774:9553/1‑251 (MQ=60)
cattgattccccggcacacaaccagaaataaaatggggagggggaaaaaaaaccgGGCTTGCCGACACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATAC < M01186:129:000000000‑A5M8V:1:1109:7325:13177/196‑1 (MQ=60)
CCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTCCAATACA > M01186:129:000000000‑A5M8V:1:2105:9554:13178/1‑251 (MQ=60)
CCTGATTACCCGGCACACAAACAACAATTAAAATGGAGAGTGGGATAAAAATCAGGCGTGCCGATACCA‑‑CCGCCGTATGTACCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAACGCCGAACTTCGCCTGTAACCGACTAACAGCCTGCTTACCGATGGGGGTTAAACCCTCCATGATGGGTTTAATGACCCGCGGCACTAGCAGAATCACCGCCACCGTTTTTACCGCCAACTGCACTAC > M01186:129:000000000‑A5M8V:1:2113:18406:2163/1‑250 (MQ=60)
cctgaattccccggcacaaaaacgacaataaaaagggtgaggggaaaaaaaacaagccttcccaatccCCCCGCCGTATGCCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATAC < M01186:129:000000000‑A5M8V:1:1109:15657:11809/183‑1 (MQ=60)
ACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAAAACACCTTTGA > M01186:129:000000000‑A5M8V:1:2109:16147:8902/1‑251 (MQ=60)
GCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTCCCGCCGTTTTTACCGCAAGCTGCAATACACCTTTGACACCG > M01186:129:000000000‑A5M8V:1:1101:9291:16592/1‑251 (MQ=60)
GCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCATCTGCAATACACCTTTGACATCGTAACCCGCGAG > M01186:129:000000000‑A5M8V:1:1107:14278:25933/1‑251 (MQ=60)
TTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGGGGAT > M01186:129:000000000‑A5M8V:1:1108:10547:19527/1‑250 (MQ=60)
ATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCTTGGCATTAGCAGCATCACTGCAGCCGTTTTTACCGCCAGCTGCAATACACCTTCTACATCGTAACCCCCGCGGATGCCGta > M01186:129:000000000‑A5M8V:1:1111:25288:15008/1‑249 (MQ=60)
GGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCACCCATGATGGGTTTCATCACCCTTGGCATTAGCACCATCCCTGCCGCCGTTTTTACCGCCACCTGCAATACACCTTTTCCATGGTAACCCGCCAGACGGCAGATAATCAGCCC > M01186:129:000000000‑A5M8V:1:2108:10668:7711/1‑250 (MQ=60)
gaaaaaaaaccgcgcttgccgatcccgCCGCCGTATGCCCCAGCAGCAACCCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCC < M01186:129:000000000‑A5M8V:1:2108:21599:25834/223‑1 (MQ=60)
accgagcctggccaatccCCCCGCGGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACCCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCCCCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA < M01186:129:000000000‑A5M8V:1:1113:22641:17887/233‑1 (MQ=60)
cggttccgcgACCACCCCGCCGTAGCTCCAGGCAGCAACGCCGTATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAAC < M01186:129:000000000‑A5M8V:1:2107:11517:12597/240‑1 (MQ=60)
TGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATAAGCCCCATCCCAAAACCAACGG > M01186:129:000000000‑A5M8V:1:1103:27686:9130/1‑251 (MQ=60)
GCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCCCAAAACCCccggg > M01186:129:000000000‑A5M8V:1:2104:21971:20954/1‑246 (MQ=60)
CCCCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGCCCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGG < M01186:129:000000000‑A5M8V:1:2107:14367:17352/251‑1 (MQ=60)
ccaCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACAC > M01186:129:000000000‑A5M8V:1:2107:21180:7137/4‑186 (MQ=60)
ccaCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAAT > M01186:129:000000000‑A5M8V:1:1106:22740:10036/4‑130 (MQ=60)
|
CCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACG‑GCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGG > NC_000913/2173120‑2173609
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
