Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F2 I0 R1
|
193 |
6708.0 |
8620653 |
98.5% |
8491343 |
136.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,839,687 |
T→G |
8.9% |
N144T (AAC→ACC) |
minD ← |
septum site‑determining protein MinD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,839,687 | 0 | T | G | 8.9%
| 347.4
/ 3.2
| 173 | N144T (AAC→ACC) | minD | septum site‑determining protein MinD |
| Reads supporting (aligned to +/- strand): ref base T (71/82); new base G (16/4); total (87/86) |
| Fisher's exact test for biased strand distribution p-value = 7.58e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 183 total aligned reads displayed.
TCTGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGT > NZ_CP022686/4839548‑4839826
|
tctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGt < 4:325762/140‑1 (MQ=255)
tctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGt < 7:866100/140‑1 (MQ=255)
ctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGAGGCGACGTCCGGGtc > 6:193025/1‑139 (MQ=255)
ctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACGGAGGAGACTTCCGGGtt > 4:911028/1‑140 (MQ=255)
ttACGCGGCCTGGGTTATAGCGCTTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTtggtg < 6:531320/140‑1 (MQ=255)
tACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTtggtgg < 4:348302/140‑1 (MQ=255)
ccgcgGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGGGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTggtggt < 5:256609/139‑1 (MQ=255)
aCGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTggtggt < 2:79428/140‑1 (MQ=255)
gcgGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGCAGTCCGGGTTGGGGGtaa > 4:900796/1‑140 (MQ=255)
gcgGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGtaa > 2:607416/1‑140 (MQ=255)
ggCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGtaata < 2:217141/140‑1 (MQ=255)
gCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGGCTGAGGAGACTTACGGGTTGGTGGtaataa > 1:292798/1‑140 (MQ=255)
gCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCAAGAATGCCTAAAATACGGTCAGAGTCGCGTAGGGAGGTGCCGTCCGGGGTTGTGGtaatta > 7:70398/1‑138 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 1:37061/140‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 6:728857/140‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 5:646195/140‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 4:738770/140‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 4:648818/140‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 8:497527/140‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTATTTAATCGGCTCTTCGCAATTTTCTGCGCGGCTTGATTTCGACGACAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTTGTGGTAATAATGGCTTCGt < 7:314351/140‑1 (MQ=255)
taGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCTCCGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAAGGAGGAGACTTCCGGGTTGGTGGTAAAAATGGCTTctga > 8:790560/1‑137 (MQ=255)
aGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGCCGCCAGAATGCCTAAAATACGGTCAGCGTCGCGTGCTGATGAGACGGACGGGGTGGTGGGAATAATGGAGTCGtgg > 7:352283/1‑138 (MQ=255)
aGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTTGTGGTAATAATGGCTTCGTCt > 4:496922/1‑140 (MQ=255)
aGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACATCCGGGTTGGTGGGAATAATGGCTTAGTCt > 3:455977/1‑140 (MQ=255)
gcgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCa < 3:1090290/140‑1 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCATAATGCCTAAAATAACGTCAGAGTCGCGTACGGCGGAGACGTGCGTGTTGGTGGTAAGAATTGCAtcttcttgaa > 7:539623/1‑136 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCATAGTCGCGGAGTTAGGAGACTAACGGGGTGGGGGTTATAATTGCTTGCTATGCaa > 5:423279/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCTTACAGCGGAAACTACCCGGTTTGTGGTAATAATATCTTCGTATGCaa > 8:930368/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCAGGTGAGGCTTGCGGGTTGGTGGTAATAATGGCTTAGTCttgaa > 8:19978/1‑136 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGCGGAGTCTTCCGGGGTGGGGGGAATAATGGCGTAGTCTGCaa > 1:140540/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGTGACTTCAGGGTTGGTGGTAATAATGGCTTCGTCTGGaa > 1:676743/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTTGTAATAATGGCTTAGTCTGCaa > 4:585095/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCaa > 4:568904/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACATCCGGGTTGGTGGGTATAATTGCTTCGGCTGCaa > 1:135229/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAAGGGGGTGACTTCCGGGTTGGTGGTTATAATGGCTTCGTCTGCaa > 6:196909/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACTTCCGGGTTGGGGGTAATAATGGCTTAGTCTGCaa > 5:330617/1‑140 (MQ=255)
cAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATaga < 4:208391/140‑1 (MQ=255)
aaGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGTTTTCGACTCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATata < 5:834714/139‑3 (MQ=255)
aGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGGCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATagag < 2:597722/140‑1 (MQ=255)
gTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGt < 6:301308/140‑1 (MQ=255)
gTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGGCAGAGTCGCGGTCGGAGGAGACTTCCGGGTTGGTGGTTATAATTGCTGAGTCAGCaaaaaaaatt > 5:1045662/1‑134 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACTGTCAGAGTCGCGTACTGATGATACGTACGGGTTTGTGGTAATAATTGGTTAGTAGGCAAAAAAGATTggc > 3:272546/1‑138 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 5:870127/123‑1 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt > 6:870127/1‑123 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTTCAAAATATAGTGcc > 6:1031160/1‑140 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGAGTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGCGGAGACTTCCGGGGTGGGGGTTATAATTGATTCGTGTGCAAAATATAGTTcc > 3:945456/1‑140 (MQ=255)
ctctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTACGGGGTGGTGGTAATAATTGAGTCGTCTGCAAAATAGAGTGGCAttt > 2:130153/1‑139 (MQ=255)
ctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACGGGGGAGGCGTCCGGGGTGGTGGGAATAATGGCTTAGGCTGGAAAATAGAGTGCCATTaaa > 3:299865/1‑139 (MQ=255)
ctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGGCGGCGGAGACGTGCGGGGTGGTGGTAATAATGGGGTCGTCTGCAAAAGAGCGTGGCATTAAc > 5:887858/1‑140 (MQ=255)
tAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACTTCCGGGGTTGTGGGATTATTTGGTTAGTCTGCAAAATAAAGTGCCAtttaatca > 7:680273/1‑134 (MQ=255)
aagcGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATCCGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGCGTGCCATTAACGCAc < 3:405429/137‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGTTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc < 3:204540/140‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc < 3:68008/140‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc < 3:585638/140‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc < 1:130153/140‑1 (MQ=255)
aTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAcc < 2:425479/140‑1 (MQ=255)
gCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTGCTGAGGAGCCGTCCGGGTTGGTGGTATTAATTGCTTAGTCTGCAAAATAGAGTGGCATTAAAGCACCgggt > 1:141096/1‑138 (MQ=255)
gCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc > 1:217004/1‑135 (MQ=255)
gCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGAGAGATGAGACTTCCGGGTTGGTGGTTATAAAGGGTTCGTCAGCAAAATATAGTGCCATTTACGCACCCGtt > 6:899771/1‑140 (MQ=255)
ctctTCGCCATTTTCTGCGCTGCGTGATTTCGACGCCAGAATTCCTAAAATACGGTCAGAGTCGCGTTATTATGAGAATTCCGGGTTGGTGGGATTAATGGTTTGGTCTGCAAAATAGAGTGGCATTCACTCAACGGtgt > 4:785985/1‑138 (MQ=255)
ctctTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGCCGTCCGGGTGGGTGGTAATAATTGCTTAGTATGAAAAATAGACTGCCATTAACGCCCCCGttt > 7:354894/1‑140 (MQ=255)
ctctTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGttt < 3:585790/140‑1 (MQ=255)
tctTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGCCTTCCGGGTTGGTTGTAATTATGGCTTGGTCTGCAAAATAGAGTTGCATTTACGCACCGGttta > 6:761407/1‑139 (MQ=255)
tctTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGCCTTCCGGGTTGGTGGTAATAATGGGTTCGTCTGCAAAATATAGTGCCATTAACGCACCGGttta > 1:967611/1‑139 (MQ=255)
tctTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACGGCGGAGACTTCAGGGTTGGGGGTAATAATGGGTTCGTCTGCAAAATAAAGAGCCAATAACGACCCGGtgtg > 6:238788/1‑137 (MQ=255)
tCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAAt < 6:843545/140‑1 (MQ=255)
tCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAAt < 6:314356/140‑1 (MQ=255)
gCCATTTTCTGCGCGGCGTGATTTCGACGCCATAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGATTGCCATTAACGCACCGGTTTCAATcc < 4:1074279/140‑1 (MQ=255)
tgcTGCGCGGGGTGATTTCGACTCCAGAATGCCTACACTACGGTCAGAGGCGCGTCCTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTGCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCg < 6:1026440/138‑1 (MQ=255)
cTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCggg < 2:38159/140‑1 (MQ=255)
aCGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAATGAGGAGACATACGGGTTGGTGGTAATAATTGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTAAATACCTGCCGGGGAGTCACAAACGATAAAt > 5:144119/1‑140 (MQ=255)
gCCTAAATTACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCa < 3:984422/140‑1 (MQ=255)
gCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCa < 8:601078/140‑1 (MQ=255)
gCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGGGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCa < 4:1060999/140‑1 (MQ=255)
ggTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGa < 1:193818/140‑1 (MQ=255)
ggTCAGAGTCGCGTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGa < 1:271603/140‑1 (MQ=255)
gTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCTTCGTCTGAAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACt < 5:381955/140‑1 (MQ=255)
aggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg > 1:1018885/1‑140 (MQ=255)
aggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg > 8:329722/1‑140 (MQ=255)
aggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg > 8:329720/1‑140 (MQ=255)
aggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTATCAGATCATCAAGAACTTTGGCg > 7:461328/1‑140 (MQ=255)
gagaCTTGCGTGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 7:120354/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTc > 2:92406/1‑117 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 6:165523/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 2:140544/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 2:140540/140‑1 (MQ=255)
gagaCTTACGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 2:1057290/140‑1 (MQ=255)
gagaCGTCCGGGTTGGTGGTAATAATGGCTTCGGCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 8:1023919/140‑1 (MQ=255)
gagaATTACGGGTTTGTTGTAATACTGGCTTCGTCTGCAAAATCGAGTGCCATTAACGCACCTGTTTCAATCCATTCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATAAATAACTTTGGCGAc < 3:602092/140‑1 (MQ=255)
gaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAccc < 7:928275/140‑1 (MQ=255)
gaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAccc < 6:536181/140‑1 (MQ=255)
aCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATATATTGCCATTAACGCACCGGTTTCAATCCCTGCCGGTGAGTAACAAACTATAAATTCAAAATCCAACGCTTTAAGATCATCAATAACTTTGGCGAccca > 7:138765/1‑139 (MQ=255)
aCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAcccc > 7:95183/1‑140 (MQ=255)
tCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTc > 3:53147/1‑140 (MQ=255)
ccGGGTTGGTTGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCa < 3:846264/140‑1 (MQ=255)
ccGGGTTGGTGGTAATAATGGCTTCGTCTTCAAAATCGAGGGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCTTCGCTTTCAGATCTTCAAGAACTTTGGCGACCCCTTCa < 7:893694/140‑1 (MQ=255)
ccGGGTTGGTGGTAATAATGGCTGCGGCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCa < 2:329487/140‑1 (MQ=255)
cGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCAc > 1:946718/1‑140 (MQ=255)
cGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCAc > 1:1010732/1‑140 (MQ=255)
ggTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGATTCAATCCCTGCCGGGCAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTATGGCGACCCCTTCAccg > 1:86457/1‑138 (MQ=255)
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TCTGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGT > NZ_CP022686/4839548‑4839826
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
