Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F35 I0 R1
|
157 |
6985.9 |
8006972 |
98.3% |
7870853 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,839,687 |
T→G |
14.7% |
N144T (AAC→ACC) |
minD ← |
septum site‑determining protein MinD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,839,687 | 0 | T | G | 14.7%
| 278.7
/ 8.9
| 160 | N144T (AAC→ACC) | minD | septum site‑determining protein MinD |
| Reads supporting (aligned to +/- strand): ref base T (55/77); new base G (25/3); total (80/80) |
| Fisher's exact test for biased strand distribution p-value = 4.69e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 164 total aligned reads displayed.
CTGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGT > NZ_CP022686/4839549‑4839826
|
ctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGATGAGACTTACGGGtt > 8:276390/1‑140 (MQ=255)
gCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGtt > 6:912211/1‑138 (MQ=255)
gagacaggCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTtgg < 3:365286/132‑1 (MQ=255)
ggCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTATCTGCGCGGCGTGATTTCGACGCCAGAAGGCCTAAAATACGGTCAGAGTCGCGTTCTGAGGAGACATCCGGTGTGGTGGtaa > 6:628268/1‑138 (MQ=255)
gCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGTCTGAGGTGACTTACGGGTTGGTGGtaataa > 8:764683/1‑140 (MQ=255)
cTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCTCGTTCAGAGGAGAATTAAGGGGTGGTGGtattaa > 3:428765/1‑138 (MQ=255)
cTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGATGAGACTTCCGGGTTTGTGGtaataa > 6:787576/1‑138 (MQ=255)
cTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGTCTGAGGAGACTTCCGGGTTGGTGGtaataa > 5:180062/1‑138 (MQ=255)
ttATAGCGCGTTAACAGTAGGTTCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGAGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCtta < 8:130668/140‑2 (MQ=255)
ttaGCGCGTTAAGAGTATGTGCGCTTTAATCGGCTATGCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTTGTGGTAATAATGGCTTc < 4:32774/137‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTc < 3:945522/138‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTc < 2:162904/138‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTc < 2:353144/138‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTc < 4:800194/138‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 8:282989/140‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCGCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGGCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTc < 2:585748/138‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCATTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTc < 1:771867/138‑1 (MQ=255)
aGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACTTCCGGGGTGGTGGTAATAATTGCTTCGTCt > 8:300263/1‑140 (MQ=255)
cgcgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACGTCCGGGTTGGGGGTAATAATTGCTTCGTCTGc > 7:461474/1‑140 (MQ=255)
cgcgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACTTCCGGGGTGGGGGTAATAATGGGTTCGTcg > 6:17193/1‑137 (MQ=255)
cgcgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGAAGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAGTGAGGAGACGTCCGGGTTGGTGGGAATAATTGGTTCggcg > 6:974089/1‑135 (MQ=255)
taagagaCAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCa < 7:832074/134‑1 (MQ=255)
gcgTTAACAGTAGGTGCTCTTTAATCGGCGCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTg < 2:573951/138‑1 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGCCGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACGTGCGGGTTTGTGGTAATAATGGCATCGTGTGCaa > 2:710205/1‑138 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGGCTAAAATACGGTCAGAGTGGCGGAATGGCGGGCGTTGCGGGTTGGGGGTAATATTGTCGTGGTCTGcca > 1:405174/1‑136 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGATACGTACGGGTTTGTGGTAATAATGGGTTCGTCTTCaa > 3:104197/1‑138 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATTGGTTCGTCTGCaa > 1:674977/1‑138 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACGTCCGGGGTGGGGGTTATAATGGGTTCGTCTGCaa > 3:693374/1‑138 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGAATGAGGAGACTTCCGGGGTGGTGGTTATAATGGCTTCGTCTGCaa > 1:285587/1‑138 (MQ=255)
aaCAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCaaaa < 4:454114/138‑1 (MQ=255)
cAGTAGGTGCTCTTTACTCGTCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGTCGCCAGAATGCCTAAAATACGTTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATaga < 7:705096/140‑1 (MQ=255)
cAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTGCTGCGCGGCGTTATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATaga < 7:604675/140‑1 (MQ=255)
aGTAGGTGCTCTTTAATCGGCTCTTCACCATTTTCTGCGCGGCGTGATTTCGACTCCAGAATGCCTAAAATACGGTCAGAGTCGCTTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATag < 2:885375/138‑1 (MQ=255)
aGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACAGAGGAGACTAACGGGGTGGTGGTAATAATGGCGTAGTGGGCAAAATAGAGt > 5:671060/1‑138 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACAGAGGAGACTTCCCGGTTGGTGGTTATAATTGCTTCGGCTGCAAAAAAGAGTGcc > 7:892914/1‑140 (MQ=255)
tGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGTCTGAGGAGACGTCCGGGGTGGTGGTTATAATGGGGTAGTGTGGAAAATAGAGTGcc > 2:158796/1‑138 (MQ=255)
tGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACAGAGGAGACTTCCGGGTTGGTGGTATTAATGGCTTAGTCTGCAAAAAAGAGTGcc > 3:1002368/1‑138 (MQ=255)
tGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTACGAGTCGCGGACTGCGGAGCCTTCCGGGGTGGGGGTAATTATGGCGTCGTCTGCCAAATagccttcc > 2:421031/1‑132 (MQ=255)
tGCGCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCTTCGTCTGCAAAATATAGTGCCAt < 8:483758/140‑1 (MQ=255)
tctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCAtt < 4:331622/138‑1 (MQ=255)
ctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGAGGAGACTTCCGGGTTGGTGGTAATAATTGCGTCGGGTGCAAAATAGAGTGCCATTAAc > 8:76905/1‑140 (MQ=255)
ttAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGAGGCGACTTGCGGGTTGGGGGTAATAATGGGTTCGTCTGCAAAATAGAGTGGCAATAAc > 3:501886/1‑138 (MQ=255)
ttAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGCGCCTTGCGGGTTGGGGGTAATAATGGGGTCGGGTGCGAAATAGAGTGGCAGTAAc > 3:855526/1‑138 (MQ=255)
ttAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACGTCCGGGTTGGGGGGTATAATTGGTTAGTCTGCAAAATATAGTGCCATTaaa > 2:46949/1‑137 (MQ=255)
ttAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGAATGAGGAGCCTTACGGGTTGGTGGTAATAATGGCTTAGTCTGCCAAATATAGTGGCATTaaa > 6:942349/1‑137 (MQ=255)
aaTCGTCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGc < 5:283674/138‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCATAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGc < 2:910692/138‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGc < 1:574928/138‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc < 7:276390/140‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGGTTCGTCTGCAAAATAGAGTTCCATTAACGc > 2:209807/1‑138 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACATACGGGTTGGGGGTAATAATGGCTTAGTCTTCAAAATAGAGTGCCATTAACGc > 5:614995/1‑138 (MQ=255)
ggCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATTGCTTCGTCTGCAAAATAGAGTGCCATTAAAGCAccc > 2:124980/1‑137 (MQ=255)
ggCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATTGCTTCGTCTGCAAAAAAGAGGGCCATTTACGCAccc > 4:990660/1‑137 (MQ=255)
ggCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACTTCCGGGTTGGTGGGAATAATTGCTTAGTGTGCAAAATAGAGTGCCATTAACGCACCg > 5:433365/1‑138 (MQ=255)
tctTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGATGAGACTTCCGGGGTGGTGGTAATAAAGTGTTCGTATGCAAAATATAGTGCCATTAACGAACCCGtt > 3:233664/1‑138 (MQ=255)
tctTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGTCTTGCGGGGTGGTGGTTATAATGGCGTAGTCTGCAAAATAGAGTGCCCTTAACGCAACCGtt > 1:904519/1‑138 (MQ=255)
cGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGAGGGGGCTTGCGGGGTGGTGGTAATAATTGGGTCGGGTGCAAAATAGTGTGGCATTAAAGCCCCGGTTTCaa > 5:521863/1‑138 (MQ=255)
gCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAAt < 1:212854/138‑1 (MQ=255)
gCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAAt < 2:1033341/138‑1 (MQ=255)
ttCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTCCTGAGGAGCCGTCCGGGGTGGTGGTAATAATGGCGTAGTCTGCAAAATATAGTGCCAGTAAACCACCCGTTTCAATACCAGc > 5:528925/1‑138 (MQ=255)
tCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGGGGAGCCTTCCGGGTTGGTGGTGATAATGGCTTCGGAGGCAAAATATAGTGCCAATAAAGCACCGGGTTAAATCCCAGCCgg > 7:600455/1‑140 (MQ=255)
gtGCGCGGCGTGATTTCGACGCCAGAATGCATAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCg < 2:480204/137‑1 (MQ=255)
cTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCg < 4:845193/138‑1 (MQ=255)
cTGCGCGGCGTGATTTCGAAGCCAGAATGACTAAAATACGGTCAGATGCGCTTACTTAGGAGACTTCCGGGTTGGTGGTAATAATGGATTCGTCTTCATAATAGAGTTCCATTAACGCACCGTTTTCAATCCCTGCCg < 2:614530/138‑1 (MQ=255)
cgcgGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGTGGAGACTTCCGGGTTGGTGGTAATAATGGGTTCGTCTGCAAAAATGAGTGCCATTAAAGCAACGGTTTCAATACCAGCCgggg > 5:728869/1‑138 (MQ=255)
gcggcgTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGt < 7:155520/140‑1 (MQ=255)
tGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCGGAGGGGACGTCCGGGTTGGGGGTAATAATGGGTTAGTCGGCAAAATAGAGTGCCAGTAACGCCCCGGTGTGAATCCCTGCCGGGGGGTgaca > 6:943886/1‑138 (MQ=255)
tGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGGCTGAGGAGCCTTGCGGGGTGGTGGGAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTcaca > 4:704321/1‑138 (MQ=255)
ttCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACg < 4:546400/138‑1 (MQ=255)
gCCTAAAATACGGTCAGAGTTGCGGACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATc < 1:118921/138‑1 (MQ=255)
gCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATc < 3:912095/138‑1 (MQ=255)
gCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATc < 4:240687/138‑1 (MQ=255)
aaaaTACGGTCAGAGTCGCGGAAATTGTAGAAATACGGGGTGGTGTTAATATTTGATGCGTATTCAAAAAATAATGGAAATAACAAACCCGTGTAAAAACCGGCCGCGGAGTCACAAAAGATAAATTCAAAAtaccac > 4:270346/1‑133 (MQ=255)
aaTACGGTCAGAGTCGCGTTCTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCGTCGTCTGCAAAATACAGTGCCATTAACGCCCCGGTTTCAATACCTGCCGGGGGGTCACAAACGATAAATTAAAAATCCCTCGc > 3:1024884/1‑138 (MQ=255)
aaTACGGTCAGAGTCGCGGACTGAGGAGACTTACGGGGTGGTGGTAATAATGGCTTCGTCTGCAAAATAAATTGGCATTAACCCACCGGTTTAAATCCCTGCCGGGGAGTCACAAACGATAAATTAAAAATCCAACGc > 6:599648/1‑138 (MQ=255)
ggTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCa < 1:268745/138‑1 (MQ=255)
ggTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCa < 2:362206/138‑1 (MQ=255)
ggTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCa < 2:203465/138‑1 (MQ=255)
ggTCAGAGTCGCGGACTGAGGAGACATCCGGGTTGGTGGTAATAATGGGGTCGTGGGCAAAATAGAGTGCCATTAACGCACCGGGTTCAAACCCAGCCGGGGCGGCCCACAAGATAAATTCAAAATCCCACGCTTTCAGa > 7:317821/1‑140 (MQ=255)
tCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGGCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGAGAAATTCAAAATCCATCGCGTTCAGa > 4:251341/1‑138 (MQ=255)
cAGAGTCGCGTACTGAGGAGACTTGAGGGTTGGTGGTAATAATGGCGTCGGCTGGAAAATAGAGTGGCATTAAAGCACCGGTTTAAATCCCAGCCGGGGAGTCCCAAACGATAAATTCAAAATCAATCGCTTTCAGat > 2:234114/1‑138 (MQ=255)
gTACTGAGGAGACTTTCGGTTTGGTGTTAATAATGTCTTCGTCTGAAACATCGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAATaa < 3:391307/138‑1 (MQ=255)
gTACTGAGGAGACTTCCGGGTTGGTGTTAATATTGGCTTCGTATGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTAACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACt < 8:745695/140‑1 (MQ=255)
gaggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTg < 1:124980/138‑1 (MQ=255)
gaggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGc < 8:461474/140‑1 (MQ=255)
aggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACttttg > 2:191697/1‑136 (MQ=255)
gagaCTTCCGGGTTGTTGGTAATAATGTCTTCGTATGCAAAATTTAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGTGGAGTCACAAACGATAAATTAAAAATCCATCGATTTCATTTCATCATGAACTTTGGCg < 3:785747/138‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATACATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg > 3:593113/1‑138 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg < 6:961186/138‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGACATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAATTCCATCGCTTTCAGATCATCAAGATCGTTGGCg > 6:68764/1‑138 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGAAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg < 5:888556/138‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAAT‑ATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGa > 5:829913/1‑138 (MQ=255)
cagaCTTCCGGGTTGGTGGTAATAATCGCTTCGGATGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCCCAAACGATAAACTCAAAATCCATCGCTTTCAGATTATCAAGAACTTTGGCGAc < 8:568134/139‑1 (MQ=255)
aCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCa < 7:738617/36‑1 (MQ=255)
ttCCGGGTTGGTGGTATTAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAATTACATCTCTTTCAGATCCTCAATAACTTTGGCGACCCCtt < 7:270865/140‑1 (MQ=255)
ttCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAcccc > 1:394934/1‑138 (MQ=255)
ccGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCtt < 3:554400/138‑1 (MQ=255)
cGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTc > 2:642261/1‑138 (MQ=255)
ggTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCAc < 6:741169/138‑1 (MQ=255)
ttGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACgg > 2:652683/1‑138 (MQ=255)
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CTGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGT > NZ_CP022686/4839549‑4839826
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
