Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,839,687 |
T→G |
12.1% |
N144T (AAC→ACC) |
minD ← |
septum site‑determining protein MinD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,839,687 | 0 | T | G | 12.1%
| 333.9
/ 7.7
| 183 | N144T (AAC→ACC) | minD | septum site‑determining protein MinD |
| Reads supporting (aligned to +/- strand): ref base T (66/90); new base G (22/5); total (88/95) |
| Fisher's exact test for biased strand distribution p-value = 2.57e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 192 total aligned reads displayed.
CTGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGT > NZ_CP022686/4839549‑4839826
|
ctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGtt < 1:1379374/140‑1 (MQ=255)
ctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGtt < 2:1064422/140‑1 (MQ=255)
ctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACGTCCGGGtt > 7:95430/1‑140 (MQ=255)
ctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGATCTTCGGCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAAAACGGTCAGAGTCGCGTAAGGAGGAGACATGCGGGtt > 5:767424/1‑140 (MQ=255)
cgtACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGGGCTCTTTAATCGGCTCTTCGCCATTATCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTtggt < 1:1267313/138‑1 (MQ=255)
cTTACGCGGCCTGGGTTATAGCTCTTTAACTGTAGGTGCTCTTTAATCGTCTCTTAGACATTTTCTGCGCGGCGTTATTTCGACGCCATAATGCCTAAAATACTGTCAGAGTCGCGTACTGAGGAGACTTCAGGGTtggt < 5:97317/140‑1 (MQ=255)
cTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCATCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTtg < 3:397938/138‑1 (MQ=255)
gcgGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAAGGAGGAGGCGTACGGGTTGGTGGtaa > 5:17916/1‑140 (MQ=255)
ggCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTtg < 3:616606/131‑1 (MQ=255)
ggCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTtg > 4:616606/1‑131 (MQ=255)
ggCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGtaata < 8:585848/140‑1 (MQ=255)
ggCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACGTCCGGGTTGGTGGtaa > 4:1048917/1‑138 (MQ=255)
gCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATGTCGACGACAGAATGCCTAAAATACGGTCAGAGTCGCGTTCGGAGGAGACCTCGGGGGtggtgggtatat > 6:1128595/1‑134 (MQ=255)
cTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGtaataa > 4:1018238/1‑138 (MQ=255)
gtataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACGGAGGAGCCGTCCGGGTGGGTGGTAATAATGGCttg > 8:333654/2‑139 (MQ=255)
tataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCT‑AAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 8:215149/140‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTc < 4:291848/138‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTc < 3:1339322/138‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 6:1211598/140‑1 (MQ=255)
ataGCGAGTTAACAGTATGTGCTCTTTTATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 5:1107720/140‑1 (MQ=255)
aGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACAGAGGCGACTTCAGGGGTGGTGGTAATAATAGCTTCGtgg > 1:866209/1‑138 (MQ=255)
gcgcGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTg < 2:52109/140‑1 (MQ=255)
cgcgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCGTAGTCt > 3:937648/1‑138 (MQ=255)
cgcgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGAGCGGCGTGATTTCGCCGCCAGAATGCCTAAACTACGGTCAGAGTCGCGGCCTGAGGAGCCGTCCCGGGTGGTGGTAAAAATTGCTTAGTCt > 4:219963/1‑138 (MQ=255)
cgcgTTAACAGTAGGTGCTCTTTAATCGACTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCGGAGGAGACTTACGGGTTGGTGGTAATAATGGCTGAGTCt > 3:1168654/1‑138 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAGGGCGGTGGATTCCGGGTTGGTGCGAATAATGGGTTCGACTGCaa > 7:843513/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGCGGTGTAGTCCGGGTTGGGGGTTATTATTGcgtcgtggggaa > 1:1220087/1‑134 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGCCTTCCGGGTTGGTGGTAATAAAGGGTTAGTCTGGaa > 8:866033/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAATTAGGAGACATCCGGGTTGGTGGTAATAATGGCTTCGTCTGCaa > 2:959972/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACGGAGGCGACTTCCGGGGTGGTGGGAATAATGGCGTCGTGTGCaa > 7:303956/1‑140 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGAGGAGACTTCCGGGGTGGTGGTAATAATGGGTTCGGCTGCaa > 4:888374/1‑138 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCTTCGTCTGCaa > 4:616645/1‑138 (MQ=255)
tAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGCGCCTTCGGGGTTGGTGGTAATTATGGCTTAGTCTGACAAAt > 5:942020/1‑140 (MQ=255)
aaCAGTAGGTGCTCTTTAATCTGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTGCTGAGGAGACATGCGGGTTGGGGGGTATAATGGGTTCGTGTGCaaat > 4:399996/1‑137 (MQ=255)
aaGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGGGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATa < 4:1231343/137‑1 (MQ=255)
ttAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACTGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGt < 1:186474/139‑1 (MQ=255)
gTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGt < 1:743950/140‑1 (MQ=255)
gTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGGGATTTCGACGCCAGAATGCCTAAACTACGGTCAGAGTCGCGTACTGAGGAGACATCCGGGGTGGTGGTAATAATGGCTGCGTCGGCAAAATAGAGt < 5:829797/140‑1 (MQ=255)
tggggCTCTTTACTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCATTATATACGTTCTGAGTCGCGTTCTGAGGAGTGTTCCGGGTTGGTGGTAATATTGGCTTCGTCTGCAAAATAGTGTGc < 8:1178420/136‑1 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTGCTGAGGAGGCGTCCGGGTTGGTGGTAATAATGGCTTAGTCGGCCAAATATCGTGcc > 2:265023/1‑140 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAATGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTAGGCTGGAAAATAGAGTggc > 1:927292/1‑138 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACGTCCGGGGTGGTGGGTATAATGGCGTAGTCTGCTAAATAGATTGcc > 1:751953/1‑140 (MQ=255)
tGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGCGGTGCCATCCGGGGTGGTGGTAATAATTTGTGAGTCTGCCAAATAGAGTGcc > 3:295074/1‑138 (MQ=255)
tctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTaa < 7:576596/140‑1 (MQ=255)
tctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACGTCCGGGTTGGGGGTAATTATGGGATCGTCGGCAAAATAGAGTGCCATTaa > 7:1238993/1‑140 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGc < 4:276574/138‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc < 7:538680/140‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc < 7:373599/140‑1 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc < 5:363507/140‑1 (MQ=255)
aaTCGGCTCTTCGCCATTATCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGc < 4:150673/138‑1 (MQ=255)
aTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAcc < 7:695446/140‑1 (MQ=255)
aTCGGCGCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAcc < 1:1144869/140‑1 (MQ=255)
acGGCTCATCGCCATTTTCTGCGCGGCGTAATTTCGACGCCAGAATGCCTAAAATACGGGCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCg < 2:136686/139‑1 (MQ=255)
tCGCCATGTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGGCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAAt < 6:589359/140‑1 (MQ=255)
cGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAATGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTAGTCTGGAAAATAGAGTGGCATTAAAGCACCGGTTTCAATc > 6:649443/1‑140 (MQ=255)
cATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCCGTTTCAATcccg > 6:420254/1‑139 (MQ=255)
ttCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCg < 2:422954/140‑1 (MQ=255)
ttCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGGCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGc > 4:184190/1‑138 (MQ=255)
cgcgGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGACGTCCGGGTTTGGTGTGATTATGGGGTCGTATGCGAAATATATTGCCATTAACGCCCGGGTTTCAATCCCTGGCGCGGAg > 7:208785/1‑140 (MQ=255)
cgTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAATGAGGAGACTTGCGGGTTGGTGGTTATAATGGATTCGGCTTCAAAATACAGTGGCATTAACGCACCGGGTTCAATACCAGCCGGGGAGTcacc > 8:671177/1‑139 (MQ=255)
cgTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGAGGAGCCGTCCGGGGTGGTGGTAATAATGGCTTCGTCGGCAAAATATAGTGCCCTTAACGCACCGGGTTCAATCCCTGCCGGGGAGTcacc > 6:995367/1‑139 (MQ=255)
ttCGACGCCAGAATGCCTAAAATACGGTCAGAGGCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTTCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGAt < 6:373491/140‑1 (MQ=255)
tCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGa < 4:1099985/138‑1 (MQ=255)
aCGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAcc < 5:1060939/103‑1 (MQ=255)
aCGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAcc > 6:1060939/1‑103 (MQ=255)
aCGCAAGAATGCCTAAAATACGGTCATAGTCTCTGAATGTGGAGACTTCCGGGTTTGTGGTAATAATGGCTTTGGCTGGAAAAAATAGTTACATTAAAACACACGGTTAAAAAACTGCCGGTGAGTAACAAAAGAAAAAt > 6:78467/1‑140 (MQ=255)
gCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACGTCCGGGTTGGTGGTTATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACCCACCGGGTTCAATCCCTGCCGGGGAGTCACAAACGAaaaaa > 4:703835/1‑137 (MQ=255)
gCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCa < 7:234451/140‑1 (MQ=255)
gCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCa < 2:999694/140‑1 (MQ=255)
gCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCa < 6:164941/140‑1 (MQ=255)
ccTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCAt < 7:660652/140‑1 (MQ=255)
ccTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCAt < 8:1093686/140‑1 (MQ=255)
ccTAAAATACGGTCAGAGTCGCGGACTGAGGAGACTTCCGGGTTGGGGGTAATAATGGCTGCGTCTGCAAAATAGAGTGCCAGTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCAt < 2:360625/140‑1 (MQ=255)
aaaaTACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGc > 4:1207885/1‑86 (MQ=255)
aaaaTACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGc < 3:1207885/86‑1 (MQ=255)
aaaTACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCt < 7:1063535/140‑1 (MQ=255)
gttCATAGTAGCGTACTGAGTAGACTTCCGGGGTGGTTGTAATAATGGATTCGTCTGCAAATTAGAGTGACATTAACTCAAAGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCa < 4:559991/136‑1 (MQ=255)
ggTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGTTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCTATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTAAGa < 6:394773/140‑1 (MQ=255)
ggTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGa < 7:278940/140‑1 (MQ=255)
ggTCAGAGTCGCGTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCTTCGTATGCAAAATAGAGTTCCATTTACGCACCGGTTTCAAACCCTGCCGGGGAGTCACAAACGATAAATTAAAAATACATCGCGTTCAGa > 2:737661/1‑140 (MQ=255)
tCAGAGTCGCGTACTGAGGAGACTTCCGGGGTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGatc > 2:826111/1‑140 (MQ=255)
tCAGAGTCGCGTACTGAGGAGACGTCCGGGTTGGTGGTAATAATTGGTTCGTGTGCAAAATAGATTGACATTAACGCCCCGGTTTAAATCCCTGCCCGGGAGTAACAAACGATAAATTAAAAATACATCGCTTTCAGa > 3:1020611/1‑138 (MQ=255)
gcgTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCAGCCGGGGAGTCACCAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGaa > 2:848621/1‑140 (MQ=255)
aggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTgg < 3:1277985/138‑1 (MQ=255)
aggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACCCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTAAGATCATCAAGAACTTTGGCg > 5:1285646/1‑140 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGTTAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc > 1:675622/1‑140 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc > 1:508904/1‑140 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 1:393665/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 2:231348/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 2:626574/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTAAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg < 3:433132/138‑1 (MQ=255)
agaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAcc < 7:1167676/140‑1 (MQ=255)
aCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTATGGCGAcccc > 7:800076/1‑140 (MQ=255)
ccGGGGTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCa < 8:506297/140‑1 (MQ=255)
cGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCAc > 5:372799/1‑140 (MQ=255)
cGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCAc > 1:281338/1‑140 (MQ=255)
ggTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGTGGAGGCACTAACGAGAAATTCAAAATCAATCGCTGTCAGATCATCAAGAAGTTTGGAGACCCCTT‑ACggg > 5:512221/1‑140 (MQ=255)
ttGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACgg > 4:368178/1‑138 (MQ=255)
ttGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGt < 1:826111/140‑1 (MQ=255)
ttGGTGGTAATAAGGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGt < 8:1127736/140‑1 (MQ=255)
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CTGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGAGGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGT > NZ_CP022686/4839549‑4839826
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
