Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F2 I0 R1
|
252 |
7301.5 |
9636800 |
98.5% |
9492248 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,839,687 |
T→G |
12.9% |
N144T (AAC→ACC) |
minD ← |
septum site‑determining protein MinD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,839,687 | 0 | T | G | 12.9%
| 305.2
/ 12.3
| 167 | N144T (AAC→ACC) | minD | septum site‑determining protein MinD |
| Reads supporting (aligned to +/- strand): ref base T (60/82); new base G (22/3); total (82/85) |
| Fisher's exact test for biased strand distribution p-value = 1.88e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 177 total aligned reads displayed.
TCTGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGT > NZ_CP022686/4839548‑4839826
|
tctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGt < 5:50371/140‑1 (MQ=255)
tctGCTTACGCGGCCTGGGTTATAGCGCGGTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGt < 3:699663/140‑1 (MQ=255)
ctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCTGAGTCGCGGACTGA‑CGAGCCTAGCGGGtt > 4:767414/1‑140 (MQ=255)
ctGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGGGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGA‑GGTGACTTCCGGGtt > 6:327325/1‑140 (MQ=255)
cTTACGCGGCCTGGGGTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCCTTTTCTGCGCGGCGTGATTTCGACTCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGT‑TGAGCCTTGCGGGTtggt > 4:369545/1‑140 (MQ=255)
ttACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTtggtg < 3:1075835/140‑1 (MQ=255)
ttACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTtgg < 2:362086/138‑1 (MQ=255)
ccgcgGAGTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTATGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTtggtg < 1:1002095/137‑1 (MQ=255)
gcgGCCTGGGGTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATGTCGGCGCCAGAATGCCTAAAATAAGGGCAGAGTCGCGGACAGT‑GGGGTCTTCCGGGTTGCTGGtaa > 5:262562/1‑140 (MQ=255)
ggCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGtaata < 5:1141865/140‑1 (MQ=255)
gCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGA‑GGAGACTTCCGGGTTGGTTGtaataa > 4:177374/1‑140 (MQ=255)
ttATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCAGGTTGGTGGTAATAATGGCTTc < 4:1181968/140‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTc < 2:303787/138‑1 (MQ=255)
ataGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGt < 5:762266/140‑1 (MQ=255)
cgcgcTTTATCAGTCGGTGCTCTTTAATCGGCTCTTATCCATTTTCTCCGCGGCGTGATTTCGACGCCATAATGTCTAAAATACGGTCAGAGTCTCTTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCt < 8:1104617/139‑1 (MQ=255)
aGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGGTGTTGGTAATTATTGCTTCGTCt > 5:673131/1‑140 (MQ=255)
aGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGAGAGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTAC‑AGCGACATCCGGGTTGGAGGTTATAAAGGCTTCGTCt > 6:224510/1‑140 (MQ=255)
cgcgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACGGACGGATCGTCCGGGGTGGGTGGT‑ATAAATGCTTCGtgt > 1:628038/1‑136 (MQ=255)
cgcgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGA‑GGAGACATCCGGGGTGGTGGTAATAAAAGCTTCGTCt > 1:296128/1‑138 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGCCGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACGGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCaa > 4:964486/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAATATACGGTCAGAGTCGCGTACAGA‑GGAGACTTCCGGGTTTGTGGTAATAATGGCTTCGTCAGCaa > 7:380057/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCaa > 4:576726/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTACGGGTTGGTGGTAATAATGGCTTCGTCGGCaa > 5:364942/1‑140 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGAGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTTA‑GGTGACGTACGGGTTTGTGGGAATAATGGGTTCGGCTggca > 3:30150/1‑137 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGACATTTTCTTCGCGGCGTGATTTCGACGCCAGAATGCCTAAACTACGGTCAGAGTCGCGTACTGA‑GGAGACGTACGGGGTGGGGGTAATAATTGCGTCGTCTGcca > 5:1069115/1‑138 (MQ=255)
cgTTAACAGTAGGTGCTCTTTAATCGCCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAAAGCCTATAATACGGTCAGAGTCGCGTAATGA‑GGCGGCATAGGGGTTGGTGGTAATAATGCCTTCGTATGCaa > 4:196695/1‑140 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTACGGGGTGGTGGTAATAATGGGTTCGTCTGGaaaa > 5:995975/1‑140 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACGTACGGGTTGGTGGTAATAATGGGGTCCTCTGCaaaa > 6:719100/1‑140 (MQ=255)
ttAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTATGCGCGGCGTGATTTCGCCGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGTTAATTCCGGGTTGGTGGAAATAATGGGATCGTCTGCaa > 2:283063/1‑138 (MQ=255)
cAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTTCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGGCGCGTACTGA‑GGAGACTTCCGGGTTGGGGGTAATAATGGCTTCGTCTGCAAAATaga < 8:665474/140‑1 (MQ=255)
cAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATaga < 4:443112/140‑1 (MQ=255)
cAGTAGGTGCTCTTTAATCGGCTCATCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATa < 2:84350/138‑1 (MQ=255)
aGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATCCGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATag < 2:390437/138‑1 (MQ=255)
aGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATagag < 3:157415/140‑1 (MQ=255)
aGTAGGGGCTCTTTAATCGGCGCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCTTAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATag < 1:655400/138‑1 (MQ=255)
gTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGt < 4:1064720/140‑1 (MQ=255)
tAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCCGGTTTGTGGTAATAAAGGCATAGTCTGCAAAATATAGTg > 4:494308/1‑140 (MQ=255)
ggTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGGTATAATGGCGTCGTCTGCAAAATAGAGTGcc > 3:520590/1‑140 (MQ=255)
ggTGCTCTTTAATCGGCTCTTAGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGACAGAGTCGCGTACTGA‑TGAGCCTTCCGGGTTGGTGGTTATAATGGCTTCGTGTGCGTAATAGAGTggc > 7:292681/1‑138 (MQ=255)
ctctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATCCGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTa < 3:971943/140‑1 (MQ=255)
ctctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGA‑GGAGCCGTCCGGGGTGGTGGTTATAATGGCTTGGTCTGCAAAATAGAGTGGCAttt > 7:231314/1‑139 (MQ=255)
ctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGA‑GGAGTCGTACGGGGTGGTGGTTATATTTGGTTCGTCTGGCAAATATAGTGGCAtttaa > 5:1042020/1‑137 (MQ=255)
ctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTAAAGA‑GGATACTTGCGGGTTGGTGGTAATAATGGTGTCGTATGCTAAATAGAATGCAATTaag > 4:1030169/1‑139 (MQ=255)
ctTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTTG‑GGTGCCTTCCGGGGTGGTGGTATTATTGGCGTCGTGGGCAAAATAGAGTGCCATTAAc > 3:47297/1‑140 (MQ=255)
ttAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCACAGTCGCGGACAGA‑CGATCCATCCCGGGTTGTGGTAATAAATGGGTAGGCTGGAAAAAATAGTGCCCATAACGc > 3:506228/1‑140 (MQ=255)
aaTCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGGCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCAc < 6:65388/140‑1 (MQ=255)
tctTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGGTGGGGGGAATAATGGCGTCGTCGGCAAAATAGAGTGCCATTAACGCACCGGGTTc > 8:359714/1‑140 (MQ=255)
tctTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGTCTGA‑GGCGACTTCCGGGGTGGTGGGATTTATGGGGTCGTCTGCAAAATAGAGTTCCATTAACGAACCGGgttg > 6:1145805/1‑139 (MQ=255)
ttCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCGTAAAATACGGTCAGAGTCGCGTTCTGA‑GGGGCCATCAGGGTTGGTGGTATTAATGGCTTAGTCTGCAAAATAAAGAGGCAATTACGCGCCGGtttt > 1:496229/1‑137 (MQ=255)
tCGCCATTTTCTGCTCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAAt < 4:1148312/140‑1 (MQ=255)
tCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTACGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAAt < 4:754187/140‑1 (MQ=255)
cGCCATTTTCTGCGCGGCGTGATTTCGCCGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGG‑GGAGCCATCCGGGGTGGTGGTTAATATGGCGTGGTCTGCAAAATAGAGTGCCAATTACGCACCGGTGTCAATc > 6:344945/1‑140 (MQ=255)
ttttCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGA‑GGAGAAGTACGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGc > 4:853771/1‑140 (MQ=255)
cTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGGCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATACTGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCggg < 8:904161/140‑1 (MQ=255)
cTGCGCGGCGTGATTGCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCg < 1:744763/138‑1 (MQ=255)
cgTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGGCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTca < 1:1082349/138‑1 (MQ=255)
ccAGATTGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCa < 4:133407/140‑1 (MQ=255)
cAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGA‑GGAGACTTCCGGGTTGGTGGTTATAATGGCTTCGTCGGCAAAATATAGTGGCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCaa > 8:201692/1‑140 (MQ=255)
cAGAATGCCTAAAATACGGTCAGAGTCGCGTTCTGA‑GGAGACTTACGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATACCTGCCGGGGAGTCACAAACGATAAATTCaa > 8:460647/1‑140 (MQ=255)
cAGAATGCCTAAAATACGGTCAGAGTCGCGGACTGA‑GGAGACGTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTAAATCCCAGCCGGGGATGCACAAACGATAAATTcta > 6:1110523/1‑138 (MQ=255)
aaTGCCTAAAATACGGTCAGAGTCGCGGAAAGA‑GGAGACTTCCGGGTTTGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGACCCGGTTTAAATCCCTGCCGGGGGGTCACAAACGATAAATTAaaaaa > 7:514983/1‑139 (MQ=255)
aaaaTACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGc < 6:690809/140‑1 (MQ=255)
ggTCAGAGTCGCGTAATGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTAGTCTGCAAAATAGAGTGCCATTAACGCAACGGTTTCAAAAACTGCCGGGGAGTCACAAACCAAAAATTCAAAATACATCGCTTTCAGa > 4:522217/1‑140 (MQ=255)
gTCAGAGTCGCGTACTGA‑GGCGACTTACGGGTTGGTGGTTATAATGGCTTCGGCTGCAAAAAAGATTACCATTAAACCACCGGTTTACTTCCCTCCCGGGGAGTCACAAAAGATAAATTAAAAATGCAACGCttgaagga > 8:1099441/1‑134 (MQ=255)
gagTGGCGTACTGA‑GGAGACTTCCTGGTTGGGTGTAATATTTGATTCGTGTGCAAAATAGAGTGAGATTAACGCACCGGTTTCAATCCCTGCCGGTGAGTAACAAACGATAAATTCATAATCCATCGCTTTCAGatca < 2:604257/138‑1 (MQ=255)
agTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGAtcatca < 3:218736/140‑1 (MQ=255)
ctCGCGTTCTTA‑GTAGACTTCAGTGTTGTTTGTAATAATGGAGGCGTCTGCTAAATAGAGTTCCATTATCTCACCGGGTTCTATCACTGCAGGGGAGTCACAAACGATAAATTCAAAATCCATCGATTTCAGatcatc < 1:357670/137‑1 (MQ=255)
cggaCTGA‑GGAGACATCCGGGTTGGTGGTAATAATTGAGTAGGCTTGAAAATAGAGTGGCATTAAAGCAACGGTTTAAATCCCGGCCGGGGACTCACACAAGATAAAATAAAAAACCAACCCTATAAAAACATCAAGAAc > 4:1133181/4‑140 (MQ=255)
tGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATAATAAAGAACATTgg > 6:577733/1‑140 (MQ=255)
ga‑ggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGc < 3:150272/140‑1 (MQ=255)
a‑ggagACTTCCGGGTTGGTGGTAATAATTGCTTCGTCTGCAAAATAGAGTGACATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCCCAAACGATAAATTAAAAATCCATCGATTTCATATCATAAAGAACTTTGGCg > 7:914762/1‑140 (MQ=255)
a‑ggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCTTTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGAGCATCAAGAACTTTGGCg < 8:374542/140‑1 (MQ=255)
a‑ggagACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg > 5:531818/1‑140 (MQ=255)
tggagACTTCCGGGTTGGTTTTAATAATGGCTTCGTCTGCAAAATAGAGTGCCTTTAACGCACATGTTTCAATCCCTTCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCTGATCATCAAGAACTTTGGCg < 6:1048724/139‑1 (MQ=255)
gataCTTCCGGGTGTGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg < 1:1176274/135‑1 (MQ=255)
gagaCTTCCGGGTTGGTTGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 8:102079/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTTGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAAATCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 6:824255/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATCGAGTGCCATTAACGCACAGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg < 1:371588/138‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg > 1:467386/1‑138 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg > 2:1080273/1‑138 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCg > 2:1003561/1‑138 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 7:508070/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 7:359714/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 5:111014/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc > 5:736160/1‑140 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 6:481594/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 3:955299/140‑1 (MQ=255)
gagaCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAc < 5:946214/140‑1 (MQ=255)
agaCTTCCGGGGTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGAcc < 3:603907/140‑1 (MQ=255)
aCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACCAACGATAAATTCAAAATCCATCTCTTTCAGATCATCAAGCACTTTGGCTCcccc > 5:841071/1‑140 (MQ=255)
aCTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCAATCGCTTTCAGATCATCAAGAACTTTGGCCAcccc > 5:922997/1‑140 (MQ=255)
ttCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACTATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCTACCCCtt > 4:229905/1‑140 (MQ=255)
ttCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCtt < 6:1123332/140‑1 (MQ=255)
tCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAAt < 5:368229/65‑1 (MQ=255)
tCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTc > 7:613391/1‑140 (MQ=255)
ccGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCa < 3:1214815/140‑1 (MQ=255)
ccGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTAAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCa < 7:274317/140‑1 (MQ=255)
cGGGTTGGTGGTAATAATGGCTTCGGCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCAc < 7:456855/140‑1 (MQ=255)
ggTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACgg > 4:192386/1‑140 (MQ=255)
ttGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGt < 6:363592/140‑1 (MQ=255)
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TCTGCTTACGCGGCCTGGGTTATAGCGCGTTAACAGTAGGTGCTCTTTAATCGGCTCTTCGCCATTTTCTGCGCGGCGTGATTTCGACGCCAGAATGCCTAAAATACGGTCAGAGTCGCGTACTGA‑GGAGACTTCCGGGTTGGTGGTAATAATGGCTTCGTCTGCAAAATAGAGTGCCATTAACGCACCGGTTTCAATCCCTGCCGGGGAGTCACAAACGATAAATTCAAAATCCATCGCTTTCAGATCATCAAGAACTTTGGCGACCCCTTCACGGGT > NZ_CP022686/4839548‑4839826
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
