Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I0 R1
|
230 |
5035.0 |
9125430 |
98.4% |
8979423 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,479,607 |
A→C |
7.3% |
intergenic (‑16/+177) |
ftsB ← / ← ygbE |
cell division protein FtsB/DUF3561 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,479,607 | 0 | A | C | 7.3%
| 523.3
/ 4.0
| 243 | intergenic (‑16/+177) | ftsB/ygbE | cell division protein FtsB/DUF3561 family protein |
| Reads supporting (aligned to +/- strand): ref base A (152/66); new base C (3/22); total (155/88) |
| Fisher's exact test for biased strand distribution p-value = 2.49e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 248 total aligned reads displayed.
GCTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTA > NZ_CP022686/1479470‑1479741
|
gCTTTCTGTGACTCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTAACGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTG‑CCCCTGAAAAAc < 8:86337/138‑1 (MQ=255)
catGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg < 4:748152/138‑1 (MQ=255)
cTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg < 2:20179/140‑1 (MQ=255)
cTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg < 2:165415/140‑1 (MQ=255)
cTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg < 4:467354/140‑1 (MQ=255)
tgtgCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCt < 3:769011/140‑1 (MQ=255)
tgCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTc > 4:714253/1‑140 (MQ=255)
aattattGAAGCGAGTATAGTCTTGTATACCGTTCTTACCGAAACACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCAATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGc < 8:48535/137‑1 (MQ=255)
attGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATACTGCACCCTGAAAAACGGCATCTTCATCCCATGCATCCGa > 6:687497/1‑140 (MQ=255)
aagcgAGTATAGTCATGTATACCGTTCTTCCAGAACCACAGAGAATACAGTAGCCAGAACAGAATAGCCATCACCAGCAGCTTTAGTTTAAACATACTTCCCCCTGAAATACGACATCAGCATCCCAATCATCCGAA‑tac > 6:1001535/3‑140 (MQ=255)
gcgAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑gacgc > 2:341107/1‑139 (MQ=255)
aGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGActc > 3:841253/1‑140 (MQ=255)
tataGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGAATCCGAA‑GACGActc > 7:718934/1‑138 (MQ=255)
gtattttataCCGTTCTTACCGACCCACAGCTAAAACTGTACCCAGACCATAATACCCAGCAACAGAAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAC‑GACGACTCTACa < 8:354219/132‑1 (MQ=255)
gTCATGAATACCGTTCTTACCGAACCACAGAGAATACTTTAGCCACACCATAATCGCCAGCACCAGCCGCGTTAGTTTACCCATCCTGCCCCCTGAAAACCGGCATCTTAATCCCATGCATCCGAC‑CACGACTCTACATc < 4:792787/140‑1 (MQ=255)
aTGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GCCGACTCTACATCctc > 4:313518/1‑140 (MQ=255)
aTGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCctc > 6:778805/1‑140 (MQ=255)
tGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCctct > 2:275254/1‑140 (MQ=255)
gTATACCGTTCTTACCGCACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTg > 4:841035/1‑140 (MQ=255)
gTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGCCCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGCCTCTACATCCTCTg > 3:59871/1‑140 (MQ=255)
tataCCTTGATTACCGAACCACCCCGAATACGGAAGCCTCCACATAATAGCCAGAAACATCAGAGTATGTTAACCCAACACCACCCCTTAAAAAAGGAATATTCCTCCCATGAAACCCAA‑GACGACTCTACATCCTCTGt < 6:898794/140‑1 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGt > 4:1115022/1‑140 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGt > 6:1045616/1‑140 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGCCTCTACATCCTCTGt > 7:136223/1‑138 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGt > 7:977836/1‑138 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGt > 7:214166/1‑138 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCATCTGt > 8:601562/1‑138 (MQ=255)
taCCGAACTTACCGACCCACAGCGAATACACTAGACAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTCAAAAACGGCATCTTCATCACATGCATCGCAA‑TACGACTCTACATCCTATGt > 8:76274/1‑138 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCCTCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTgggg > 5:357411/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACTACTCTACATCCTCTGTTgggg > 2:950955/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTgggg > 1:829876/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAAAACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCAACATGACCCCTGAAAAAACGCATCTTCATCCCATGCCTACGAA‑GACGACACAACCACCACTGTTgggg > 6:409400/1‑140 (MQ=255)
gTTCTTACCGAACCACATCGATTCCTGTCGCCCCACCAGAATCGCCCCCAACCGCAGCGTTAGTTTACCCATCCTCCCCCCTCAAAACCGGCATCTTCATCCCATGCCTCCGAC‑GACGACTCTACATCCTCTGTTGGGGa < 2:429955/140‑1 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 4:110610/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 4:579984/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 4:483903/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 2:196614/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCGGTTGGGGAt > 3:731532/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCACAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACTGCATCTTCAACCCATGCATCCCAA‑GACGACTCTACATCCTCTTTTGGGGATAc > 5:1010549/1‑140 (MQ=255)
ttACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACACTACATCCTCTGTTGGGGATAcc > 2:1183393/1‑140 (MQ=255)
aCCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACcgc > 2:736019/1‑140 (MQ=255)
aCCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACcgc > 3:884057/1‑140 (MQ=255)
aCCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGACCCCTGAAAACCGGCATCTTCATCCCATGCATCCGAG‑TACACCTCTACATCCACGGGTGGGGATACAGCGACaa > 1:897864/1‑140 (MQ=255)
gCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAAcgcg > 8:683760/1‑138 (MQ=255)
cGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGc > 2:842373/1‑140 (MQ=255)
ttAGCCAGACCATAAAAGCCCGCAACAGCAGCGTTAGTTTACCCACCCGCCCCCCTTAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc < 2:52263/139‑1 (MQ=255)
gTAGCCAGACCAGAATAGCCAGCACCAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc > 2:553176/1‑140 (MQ=255)
gTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATg > 1:1001726/1‑80 (MQ=255)
ccagaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACcaca > 3:411635/1‑140 (MQ=255)
ccagaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCAATCCTGCCCCCTGAAAAACGGCATCTTCATCACATGCATCCGAA‑CACGACTCTCCATCCTCTGTTGGGGATACCGCGCCAACGCGGGCAAATGTACca > 7:866001/1‑138 (MQ=255)
agaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATACCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCCGGCAAATGTACcaca > 8:469930/1‑138 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACAtt > 7:439517/1‑138 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTg > 3:627223/1‑140 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTg > 6:158954/1‑140 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTg > 1:833520/1‑140 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTg > 5:162980/1‑140 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAAAGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACAACCTCTCTTGGGGATAACTCGACAACGCTGGCAAATGTACcacaaatt > 3:211190/1‑136 (MQ=255)
aaTAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAt > 1:603248/1‑140 (MQ=255)
cgCCAGCAACAGCAGGGTTAGTTTCCCCAACCGGCCCCCTCAAAACCGGCCTCTTCATCCCAGGCATCCGAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 4:620741/139‑1 (MQ=255)
cccccgCAACCGCTGCGTTAGTTTACCCATCCTGCCCCATTAAACACGGCATCTTCAACCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 6:63188/135‑1 (MQ=255)
agcccccAACAGCCGCGTTTGTTAACCCAACCACCCCCCTCAAAACCGCCATCTTCAACCCATCCCCCCGAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 1:330946/134‑1 (MQ=255)
aGCCAGCAACTCCAGCGTTAGTTTACCGATCCTCCCCCTTTAAAACCTGTATCTTCTTCCCATGCATCCCAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAtt < 8:214166/138‑1 (MQ=255)
aGCCAGCAACCGCAGCTGTTGTTAACCAAACCTCCCCCATTAAAAACGGCATCTACACCCCTTGCATCAGAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAtt < 7:50558/138‑1 (MQ=255)
aGCCAGCAACCCCCGAGTTATTTTCCCCATCCTGCCCCCTTAAAAACGGCATCTTCATCCCATGCATCCCAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 6:26741/140‑1 (MQ=255)
aGCCAGCAACAGCAGCGTTAGTTTACCCATCCTCCCCCCTGAAAAACGGCATCTTCATCCCATCCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 5:900503/140‑1 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa > 5:894192/1‑140 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATACTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa > 1:408320/1‑140 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCAACCCATGCAACAGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACACTTGTCGAttttaa > 5:3964/1‑136 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCAATTAAAAACGGCATATTCCTACCCTGCATCCGAA‑GCCGCCTCTACCTCCTCTGTTGGGGATACAGCGACAACGCGGGCAAATGTACCACTTTTGACTATTGttt > 2:253221/1‑139 (MQ=255)
ctcAACAGCCGCTTTATGTGACCCTTCCTGCCCCCTCAAAACCGCCATCTTCACCCCATCCTGCCTCC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 1:178031/138‑1 (MQ=255)
cgCAACAGCAGCGTTATTTAACCCATCATGCCCCCTTAAAAACGGAATATTCATCCCTTGCATCCTAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 2:1095376/139‑1 (MQ=255)
cccaccagccgCGTTTTTTTACCCTGCCTGCCCCGTCAAAACCGGAATCTT‑AACCCACTCAACCCAACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 3:1109463/135‑1 (MQ=255)
accAACAGCAGGGTTTTTTAACCCATCCTGCCCCCTTAAAAACGGCATCTTCATCCAATGCATCCGAT‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 6:339029/138‑1 (MQ=255)
aGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGGTGGGGATACCGCGACACCGCGGGCAAATGTACCACATTTGTCGATTGTTa > 8:1006548/1‑138 (MQ=255)
aGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTATACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg > 2:588754/1‑140 (MQ=255)
cAACCGCTGCGTTTGTTTACCCATCCTGCCCGCTGAAAAACGTCATCTTTAACCCATTCATCCGCC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta < 5:373379/140‑1 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta > 1:1124700/1‑140 (MQ=255)
aaaCTGCAGGGTTAGTTTACCCATCCTGCCCCCTGAAACAGGGAATCTTCATCCCTTGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta < 5:199349/139‑1 (MQ=255)
aaCAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGtat > 5:484642/1‑140 (MQ=255)
cagcGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGTGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCa > 6:476672/1‑140 (MQ=255)
cagcGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGAACCACATTTGTCGATTGTTACGTATACCCa > 6:566986/1‑140 (MQ=255)
gcGTTATTTTACCCACCCTCCCCAGTTAAAAACGTCAGCTACATCCAATCAATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGAACCACATTTGTCGATTGTTACGTATACCCAgg < 3:34708/140‑1 (MQ=255)
gcGTAAGTTTACCCATCCTGCCCCCAGAAAAACGGCCTCTTCATCCCATGCATCCGAA‑GACGACACTACATCCTCAGTTGGGGATACCGCGACAACGCGTGCAAATGTACCACATTAGTCGATTGTGACGTATAccaa > 7:616933/1‑136 (MQ=255)
tttAGTTAACCCACCCCGCCCCCTTAAAAACGCCATCTTCACCCCATGAATCCTAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGc < 1:1100771/139‑1 (MQ=255)
ttAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCg > 1:635651/1‑140 (MQ=255)
tgtaaacccacccGCCCCCATTAAAAACGGAATCTTCAACCCATCCACCCTAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 3:1012924/135‑1 (MQ=255)
tgTTTACCCATCCTGCCCCATTAAAACCGGCATCTTAATCCCATGCATCCGAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 2:785718/139‑1 (MQ=255)
aGTTTACCCATCCTGCCCCCTTAAAAACGGCATCTTCATCCCATGCATCCCAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 6:914454/140‑1 (MQ=255)
cccATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 5:862840/1‑140 (MQ=255)
cccATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 2:663788/1‑140 (MQ=255)
cATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGc > 7:349839/1‑38 (MQ=255)
ccTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACAt > 2:133189/1‑99 (MQ=255)
ccTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACAt < 1:133189/99‑1 (MQ=255)
ccTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATAGTTACGTATACCCAGGGCGTGCAGAACATAAt > 5:1058121/1‑140 (MQ=255)
tGCCCCCTTAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGt < 8:283133/126‑1 (MQ=255)
tGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGt > 7:283133/1‑126 (MQ=255)
ctcaaaaaCGGCATCTTCATCCCATGCATCCTAA‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCattat < 4:673150/137‑1 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCattatt > 5:671995/1‑140 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCattatt > 4:212456/1‑140 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCattatt > 1:885833/1‑140 (MQ=255)
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GCTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTA > NZ_CP022686/1479470‑1479741
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
