Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F2 I0 R1
|
252 |
7301.5 |
9636800 |
98.5% |
9492248 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,479,607 |
A→C |
12.4% |
intergenic (‑16/+177) |
ftsB ← / ← ygbE |
cell division protein FtsB/DUF3561 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,479,607 | 0 | A | C | 12.4%
| 492.8
/ 13.5
| 255 | intergenic (‑16/+177) | ftsB/ygbE | cell division protein FtsB/DUF3561 family protein |
| Reads supporting (aligned to +/- strand): ref base A (149/66); new base C (4/35); total (154/101) |
| Fisher's exact test for biased strand distribution p-value = 2.78e-12 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 256 total aligned reads displayed.
CTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTA > NZ_CP022686/1479471‑1479741
|
cTTGCTGTGCCGCCACATCATTATTGACTCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg < 3:563951/140‑1 (MQ=255)
cTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAAc < 2:490221/138‑1 (MQ=255)
cTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg < 4:454993/140‑1 (MQ=255)
cTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg < 3:193664/140‑1 (MQ=255)
cTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg < 4:8117/140‑1 (MQ=255)
tGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCa > 4:766015/1‑140 (MQ=255)
cTGTGCCGCCCCATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATc > 5:338422/1‑140 (MQ=255)
cTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCa < 2:442341/138‑1 (MQ=255)
cTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCa > 1:304564/1‑138 (MQ=255)
gccgccACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCtt > 1:164309/1‑138 (MQ=255)
ccgccACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCATGCCCCCTGAAAAACGGCATCTTCAt > 6:791892/1‑140 (MQ=255)
ccACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATccc > 4:219507/1‑140 (MQ=255)
cacaTAATTCTTGCCGCTAGTTTAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCACCAGAAGCGTTTGTTTACCCATCCTGCCCCCTGAAAAACGGTATCTTCATCCCa < 4:40394/140‑1 (MQ=255)
catcatTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATg < 3:858991/140‑1 (MQ=255)
catTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGACTACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCAt < 7:822832/140‑1 (MQ=255)
ttttGACGCGTGTATAGTAATGTATACCGTTCTTACCTACCCACAGCGAATACTGTAGCCAGACCAGAATAGCCTGCAACAGCAGCTTTAGTTTACCCATCCTGCCCCCTTAAAAACGGCATCTTCATCCCATGCATCCg < 4:1224738/138‑1 (MQ=255)
gcgAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCAGCTTCATCCCATGCATCCGAAgac > 1:756258/1‑138 (MQ=255)
cgtttagaGTCATGTATACCGTTCTAACCGAACCCCAGCTAATACTTTAGCCACACCACAATACCCAGAAACAGCAGCTTTTGTTTACCCATCCTGCCCCCTTAAAACCGCAATCTTCATCCCATGCATCCGAAcacgac < 6:634368/133‑1 (MQ=255)
aGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGActc > 3:1119279/1‑140 (MQ=255)
ttattGTCATGTATACCGTTCTTACCGAACCACCGCTAATACTGTAGCCCGACCATAATAGCCCCAAACAGCTGCGTTTGTTTACCCATCCTCCCCCATTAAAACCGGCATCTTCATCCCATGCATCCGAAGACGActct < 8:736540/139‑1 (MQ=255)
tataGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTa > 8:415095/1‑140 (MQ=255)
gTCTTGTATACCTTTCTACCCGAACCAAAGAGAATACTGTATCCAGACAATAATACCCAGCAACAGCAGCGTTAGTTTACCAATCCTGCCCCCTCAAAACCGGCATCTTCATCCCATCCATCCGAAGACGACTCTACATc < 8:1067500/140‑1 (MQ=255)
tGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCa > 5:905954/1‑112 (MQ=255)
gTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAAAAGCCAGAAACAGCAGCGTTAGTTTCCACAACGTGCGCCAAGAAAAACGGAAAGTAAATCCCATCCATCCGAAGCCGAAACAACATcata > 1:787730/1‑135 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGt > 6:47795/1‑140 (MQ=255)
tataCCGTTCTTACCGAAACACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGAGTTAGTTTACCCATCCTGCCCCCGGAAAAACGGCATCTTCATCCCATGCATCCGAACACGCCTCTACATCCTCTGt > 8:146302/1‑140 (MQ=255)
ataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTg > 2:310287/1‑138 (MQ=255)
ataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCAAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCAGAAAAACGGCATCTTCATCCCATGCATCCGAAGCAGACTCTACATCCACTg > 2:676656/1‑138 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATg > 7:574129/1‑110 (MQ=255)
aCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTgg > 7:48925/1‑140 (MQ=255)
ccGTTCTTCCCGAACCACAGCGAATACTGTAGCCATACCAGAATAGCCAGCAACAGCAGCGTTAGATTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTg > 2:867765/1‑138 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTgggg > 3:777069/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTgggg > 5:313271/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCGGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTgggg > 6:189877/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATACTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTgggg > 5:30383/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGATTACACATCCTGCCCCCGGAAAACCGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCGGTTgggg > 5:77973/1‑140 (MQ=255)
ttCTTACCTAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCACCAGCAGAGTTAGTTTACCCATCCAGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCACTGTAGGGGAt > 6:188000/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGCCCAGAATAGCCAGCAACAGCAGCGTTAGTGTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 8:67199/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGCCTACTCTACATCCTCTGTTGGGTAt > 5:207420/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 7:264555/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 4:993082/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 5:554873/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 4:752622/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 6:684968/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 3:905752/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 7:936935/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCACCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 6:1168735/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCAACCTGAAACACGGCATCTTCATCCAATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 1:1007361/1‑138 (MQ=255)
cacaGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGATTACACATCCTGCACCCTGAAAAACTGCATCTTCATCCCATGCATCCGAATCCGACTCTACATCCTCTGTTGGGGGTACCGCGACaa > 1:999160/1‑138 (MQ=255)
aaTACTGTTGCCAGACAATAATAGCCAGAAACCCTAGGGTTTGTTAACCCACCCTGCCCCATCAAAAACGTCATCTTCCTCCCATGAATCCCAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCaa < 4:195183/140‑1 (MQ=255)
aaTACTGTGGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCAGCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCaa > 3:1081847/1‑140 (MQ=255)
aaTACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGc > 2:939759/1‑138 (MQ=255)
ttgtccccacaccagaAATCCCAGCAACTGACGGTTTTGTTTACCCATCGTGCCCCCTGAAAACCGGAATCTTCCACCCATGCATCCAACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGt < 6:282306/134‑1 (MQ=255)
ttcccccgaccataAACGCCAGCACCAGCTGGGTTATTTTCCCCATCCTGCCCCCTTAAAAACGGCAGCTTCATCCAATCCAGCCGACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc < 7:547261/133‑1 (MQ=255)
gaccccagcccagaATCCCCCCCACCACCCGCGTCTGTTTCCCCACCCTCCCCCCTGAACACCGGCAGCTTCCACCCATGCACCCCACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc < 7:870318/136‑1 (MQ=255)
gTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc > 7:728083/1‑140 (MQ=255)
aGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc > 1:110906/1‑138 (MQ=255)
agaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGCCGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACcaca > 1:1145977/1‑138 (MQ=255)
gaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg > 7:315616/1‑58 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGCCGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGTCAAATGTACACCATTTg > 3:1011159/1‑140 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACAtgtg > 6:105764/1‑140 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGAGACAACGCGGGCAAATGTACCACATTTg > 8:306528/1‑140 (MQ=255)
cagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTg > 2:543146/1‑138 (MQ=255)
cagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTg > 1:888776/1‑138 (MQ=255)
tAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAt > 1:701529/1‑138 (MQ=255)
ctcccgCAACAGCAGCGTTATTTAACCCATCCTGCCCCATTAAAACCGGCATCTTCATCCCATGCATCCCACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 6:50951/135‑1 (MQ=255)
cccccgCAACACCCGCGTTAGATTACCCATCCACCCCCAACAAAACCGCCAGCTTCCTCCCAGGCAGCCGCCCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAtt < 2:837965/133‑1 (MQ=255)
ccccAGCAACACCAGCGTTCTTTAACCCATCCTGCCCCATCAAAAACGGCATCTACAACCCATGCACCCCACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 5:393136/138‑1 (MQ=255)
acccaccaACCGCAGCGTTAGTTTACCCAACCTGCCCCCTGAAAAACGGCATCTTCAACCCATGCATCCGAACACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 4:913232/138‑1 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAttatta > 6:605508/1‑140 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa > 7:341099/1‑140 (MQ=255)
cgCAACAGCAGCTTTTTTTTACCCATCCTGCCCCCTTAAAAACGGCATCTTCATCCCATCCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 3:195301/139‑1 (MQ=255)
cgCAACAGCAGCGTTTGTTTCCCCACCCTCCCCCCTGAAAAACGCCATCTTCATCCCATCCAACCTAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 7:914135/139‑1 (MQ=255)
atcAACAGCAGCTTTAGTTTACCAATCCTGCCCCCTCAAAAACGTCATATACATCCCATCCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 8:591090/138‑1 (MQ=255)
accAACAGACGCGTTATTTTCCCCATCCTCCCCCTTTAAAACCGGCATCTTAATCCCCTGCATCCGAACACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 6:445892/138‑1 (MQ=255)
accAACACCAGGTTTTGTTAACCCATCATCCCCCCTTAAAAACGGCATCTTCATCCCATGCATCCGAACACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 3:485645/138‑1 (MQ=255)
accAACACCAGCGTTAGTTAACCCCTCCTGCCCCCTCAAAACCGCCAGCTTCAGCCCATGCACCCCACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 7:433147/138‑1 (MQ=255)
aGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa > 1:1092835/1‑138 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGGTACGta > 8:903069/1‑140 (MQ=255)
aaaaagcaggTTTAGTTTACCCATCCTGCCCCCTTAAAAACGTCATCTTCAACCCATGCATCCCACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta < 5:684968/136‑1 (MQ=255)
aaCAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGtat > 7:1072971/1‑140 (MQ=255)
aaCAGCAGCGTTAGTTTACCAATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGtat > 7:190897/1‑140 (MQ=255)
gctttATTTAACCAATCCTGCCCCATCAAAACGGGCATCTTCATCCCATTCATCCCACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCa < 1:452886/135‑1 (MQ=255)
gcGTTAGTTACCCCATCGGCCCCCCTCAAAAACGGCAGCTTCATCCCATGCTTCCGAACACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAgg < 8:700092/140‑1 (MQ=255)
tttttACCCATCCTGCCCCCTCAAAACCGGAAGCTTCAACCCTTGCACCCCAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 5:1142153/138‑1 (MQ=255)
tgTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 6:313271/139‑1 (MQ=255)
tgTTAACCCATCCTGCCCCCTCAAAAACGCAATCTTCATCCCATGCCTCCGAACACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTGTACCCAGGGCGTg < 8:330361/139‑1 (MQ=255)
tttACCCCTCCAGCCCCCTCAAACACGCCATCTTCCTCCCATCCACCCCACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCa < 6:889079/140‑1 (MQ=255)
ttaaCCCATCCTCCCCCCTTAAAACCGGCATCTTCACCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCa < 4:1174362/137‑1 (MQ=255)
cccATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 3:766011/1‑140 (MQ=255)
caaTCATGACCCATTAAAAACGTCATATTCACACAATGCAACCGAAGACGACTCTACATCCTCTGTTGGTGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACa < 6:976122/138‑1 (MQ=255)
cATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGCCAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 2:1139503/1‑138 (MQ=255)
cATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 2:793721/1‑138 (MQ=255)
cATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 2:227988/1‑138 (MQ=255)
ccTGCCCCCTGAAAAACGCCATCTTCAACCCATCCAGCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATa < 1:38614/138‑1 (MQ=255)
ccTGCCCCCTCAAAAACGGCTTATTCACCCCATCCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATa < 1:1243160/138‑1 (MQ=255)
ccTCCCCCCTTAAAACCGCCATCTTCAACCCATCCAACAGACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt < 4:617787/140‑1 (MQ=255)
cTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCatt < 2:701529/138‑1 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCattatt > 3:327604/1‑140 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCattatt > 5:742332/1‑140 (MQ=255)
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CTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTA > NZ_CP022686/1479471‑1479741
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
