Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I0 R1
|
235 |
6960.4 |
9135780 |
98.4% |
8989607 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,479,607 |
A→C |
13.2% |
intergenic (‑16/+177) |
ftsB ← / ← ygbE |
cell division protein FtsB/DUF3561 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,479,607 | 0 | A | C | 13.2%
| 423.9
/ 13.0
| 221 | intergenic (‑16/+177) | ftsB/ygbE | cell division protein FtsB/DUF3561 family protein |
| Reads supporting (aligned to +/- strand): ref base A (122/64); new base C (5/30); total (127/94) |
| Fisher's exact test for biased strand distribution p-value = 1.44e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 222 total aligned reads displayed.
GCTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAG > NZ_CP022686/1479470‑1479742
|
cTTGCTGTGGCGCCACATCATTATTGACGTGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCTGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg < 7:151205/140‑1 (MQ=255)
cTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAAc < 4:120158/138‑1 (MQ=255)
ttGCTGTGCCGCCACATAATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGc < 7:117033/140‑1 (MQ=255)
tgttgtgCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCATACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCa < 8:695130/137‑1 (MQ=255)
cTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGCAAAACGGCATc > 5:1001939/1‑140 (MQ=255)
tgCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCCTCCTGCCCCCTGAAAAACGGCATCtta > 5:955543/1‑139 (MQ=255)
gccgccCGATCATTTTTGACGCGAGTATACTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAACCGGCATCTTCa < 2:737184/140‑1 (MQ=255)
gccgccACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCtt < 4:557491/138‑1 (MQ=255)
cgccACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATc < 1:935630/140‑1 (MQ=255)
catcatTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATg < 8:599933/140‑1 (MQ=255)
catTATTGACGAGAGTATAGTCATGTATACCGTTCTTACCGAACCACATCGAATACTTGAGCCAGACCAGAATAGCCAGCACCAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCAt < 7:435490/140‑1 (MQ=255)
attattGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCa > 3:774983/1‑138 (MQ=255)
attGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGa > 6:594565/1‑140 (MQ=255)
ttGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGaa > 5:634548/1‑140 (MQ=255)
gACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑ga > 7:314825/1‑140 (MQ=255)
aCGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑gac > 7:1000652/1‑140 (MQ=255)
aGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGActc > 1:707842/1‑140 (MQ=255)
gTCATGTATACCGGTCTTACCGAACCCCAGCGAATACTGTCGCCACACCCTAATCGCCAGCAACAGCTGCGTTAGTTTCCCAATCCGGCCCCCTGAAAAACGGAATCTTCAACCCATGCATCCGAA‑GACGACTCTACATc < 8:1000726/140‑1 (MQ=255)
tCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGCCCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATcc > 1:178128/1‑140 (MQ=255)
aatttataCCGTTCTAACCGAACAACCCCGAATACTGTAGCCAGACCATAAAAGCCAGAAACAGCAGCTTTAGTTTACCCATCCTGCCCCCTTAAAAACGGCATATTAATCCAATGCATCCTAA‑GACGACTCTACATCct < 8:103373/136‑1 (MQ=255)
aTGAATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCctc > 5:815748/1‑140 (MQ=255)
gTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAACCGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTg > 2:988473/1‑140 (MQ=255)
gTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTg > 2:499445/1‑140 (MQ=255)
gTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTg > 6:1114141/1‑140 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCctct > 4:698841/1‑138 (MQ=255)
ataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTg > 4:187690/1‑138 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTg > 7:485471/1‑140 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTg > 2:826154/1‑140 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTg > 2:855715/1‑140 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTg > 2:1102019/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATc < 5:278846/96‑1 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTgggg > 6:198943/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACgg > 6:558975/1‑90 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTgggg > 3:19293/1‑138 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 7:606139/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 5:547564/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGAATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 6:73189/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCAACCCATGGATCAGAA‑GACGACTCTACGTCCTCTGTTGGGGAt > 7:571300/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCCGCAACAGCAGCGTTAGTTTACCCCTCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 3:1157927/1‑138 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GCCGACTCTACATCCTCTGTTGGGGAt > 4:483311/1‑138 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 3:1055072/1‑138 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 4:755341/1‑138 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATAc > 8:902328/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATAc > 5:563886/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATAc > 7:730949/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCAGCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 4:260827/1‑138 (MQ=255)
tACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATAc > 4:1147990/1‑138 (MQ=255)
tACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATAc > 4:812730/1‑138 (MQ=255)
aCCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACcgc > 7:240144/1‑140 (MQ=255)
gAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGAc > 2:334994/1‑140 (MQ=255)
aCCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATACTCTGTTGGGGATACCGCGACaa > 1:1028678/1‑140 (MQ=255)
aGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCgg > 2:586117/1‑140 (MQ=255)
ctaaTACTGTAGCCCTACCCTAATCGCCCGAAACAGCAGCTTTCGTTTACCTATCATGCCCCCTTAAAAACGTAAGCTTCATCCCATGCACCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCgg < 4:662476/136‑1 (MQ=255)
ctaaTACTGTAGCCAGACCACAATCCCCACCAACAGCCGCGTTAGTTACCCAAACCTCCCCCCTAAAAAACGCCATCTTAAACCCATCCATCCCAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGc < 6:815748/138‑1 (MQ=255)
cGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCgg > 4:76558/1‑138 (MQ=255)
aaTACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAACCGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCGCTGTTGGGGATACCGCGACAACGCGGGc > 4:323824/1‑138 (MQ=255)
aGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTACATCCCATGCATCCGAA‑GACGACTCTACTACCTCTGTTGCGGATACCGCGACAACGCGGGCAAATGTAc > 3:308505/1‑138 (MQ=255)
cagaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACAt > 5:980661/1‑140 (MQ=255)
agaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACcaca > 3:333469/1‑138 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGTGCAAATGTACCACAtttt > 6:316913/1‑139 (MQ=255)
cagaATATCCAGAAACAGCAGCGTTAGTTTACCCATCCTGCCCCCAGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACAGCGCCAAATCGGGCAAATTTACAACATTTg > 4:612155/1‑138 (MQ=255)
aaTAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAt > 8:418264/1‑140 (MQ=255)
aaTAGCCAGCAACAGCAGCGGTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAt > 5:719294/1‑140 (MQ=255)
tacccagcaccagcaGCGTTAGTTAACCCAACCGGCCCCCTCAAAACCGGCATCTTCACCCCATCCATCCGAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTg < 7:229443/137‑1 (MQ=255)
cgCCAGCAACAGCAGCGTAATTTTCCCCTTCCTCCCCCCTTAAAACCGCCATATTCACCCCATGCATCCCAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 8:187833/139‑1 (MQ=255)
accccgaaaCACCAGCTTTAGTTTACCCACCATCCCCCCTCAAAAACGGCTTCTTCATCCCATGAATCCGAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 6:236367/133‑1 (MQ=255)
acccAGCACCCGCTGGGTTAGTTTCCCCAACCCGCCCCCTCAAAACCGGCATCTTCACCCCATCCACCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 5:498691/138‑1 (MQ=255)
acccAGCAACAGCATCGTTAGTTTACCCATCCTGCCCCCTCAAAACCGGCATCTTCATCCCATCCAACCGAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 1:1105081/138‑1 (MQ=255)
aGCCAGAAACACCAGCGTTAGTTAACCCATCCTGCCCCCTCAAAAACGGCACTTTCATCCCAGGCATCCGAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 8:974860/140‑1 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGCCTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa > 1:439525/1‑140 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACAACCTCTGTTGGGGATACAGCTACAACGAGGGCAAATGTACCACATTTGTCGATTGTTa > 7:834608/1‑140 (MQ=255)
cgataacgcagcTTTTGTATCCCCTACCTGCCCCCTTAAAACCGCCATCTACATCCCATGCATCCTAA‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 5:1050448/133‑1 (MQ=255)
cgCAACACCTGCGTTTTTTAACCCATCCTGCCCCATAAAAACCGGATTCTTCAACCCATGAATCCTAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 8:314825/139‑1 (MQ=255)
aGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa > 4:426043/1‑138 (MQ=255)
aGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg > 1:246042/1‑140 (MQ=255)
aGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCAACCCATGCATCCGAA‑GACGCCTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAAAGTACCACAATTGTCGATTGATa > 3:440405/1‑138 (MQ=255)
cacacgcagtGTTAGTTACCCAAGCCGCCCCCCTCAAAAACCTAATGATCAACCCAT‑CATCCCAACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta < 1:771800/135‑1 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGCCTCTACCTCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACTTTTGTCGATTGTTACGtt > 6:426024/1‑139 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg > 3:993635/1‑138 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg > 3:57147/1‑138 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta > 8:731326/1‑140 (MQ=255)
gcGTTTTTTTACCAATCCTGCCCCCTGAAAAACGGAATATTCATCCCTTGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAgg < 6:129136/140‑1 (MQ=255)
ttttaacccacccGCCCCCCTGAAAAACGGCATCTCCACCCCTTGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 1:815442/135‑1 (MQ=255)
tgtatACCCAACCGCCCCCCTTAAACCCGGCATCTACATCCCATGCACCCCAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCg < 3:756311/134‑1 (MQ=255)
tgTTTACCCATCCTGCCCCCTTAAAAACGGCATCTTCAACCCATGCAACCTAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCg < 3:704049/137‑1 (MQ=255)
tgTTTACCCATCCTGCCCCCTCAAAAACGGCATCTTCATCCCATGCATCCCAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 2:225401/139‑1 (MQ=255)
aGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCg > 3:642525/1‑138 (MQ=255)
aGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCg > 3:961610/1‑138 (MQ=255)
gTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGc > 2:1053165/1‑140 (MQ=255)
ttACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACAttt > 3:826924/1‑109 (MQ=255)
cATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAATGTTACGTATACCCAGGGCGTGCAGAAc > 3:657084/1‑138 (MQ=255)
tCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACAt > 3:261688/1‑138 (MQ=255)
ccgccccccTTAAAACGGGCATCTTCATCCCATGAACCCCAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt < 7:368046/136‑1 (MQ=255)
ccTGCCCCCTCAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt < 8:660956/140‑1 (MQ=255)
ccTGCCCCCTAAAAACCGGCACCTTCATCCCATGCATCCCAA‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt < 6:671480/140‑1 (MQ=255)
gCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACCACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTAGACCCAGGTCGTGCAGAACAGAAtctc > 8:54982/1‑140 (MQ=255)
cccccTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCa > 8:81961/1‑140 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACAGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCattatt > 2:933309/1‑140 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCATCATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATAGTTAAGTATACCCAGGTCGTGCAGAAAAAAATCTCattatt > 7:75953/1‑140 (MQ=255)
aaaCGCTATCTTCATCCCATGCACCCGAA‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAg < 3:918450/138‑1 (MQ=255)
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GCTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAG > NZ_CP022686/1479470‑1479742
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
